The aim of object-centric vision is to construct an explicit representation of the objects in a scene. This representation is obtained via a set of interchangeable modules called \emph{slots} or \emph{object files} that compete for local patches of an image. The competition has a weak inductive bias to preserve spatial continuity; consequently, one slot may claim patches scattered diffusely throughout the image. In contrast, the inductive bias of human vision is strong, to the degree that attention has classically been described with a spotlight metaphor. We incorporate a spatial-locality prior into state-of-the-art object-centric vision models and obtain significant improvements in segmenting objects in both synthetic and real-world datasets. Similar to human visual attention, the combination of image content and spatial constraints yield robust unsupervised object-centric learning, including less sensitivity to model hyperparameters.

Several self-supervised representation learning methods have been proposed for reinforcement learning (RL) with rich observations. For real-world applications of RL, recovering underlying latent states is crucial, particularly when sensory inputs contain irrelevant and exogenous information. In this work, we study how information bottlenecks can be used to construct latent states efficiently in the presence of task-irrelevant information. We propose architectures that utilize variational and discrete information bottlenecks, coined as RepDIB, to learn structured factorized representations. Exploiting the expressiveness bought by factorized representations, we introduce a simple, yet effective, bottleneck that can be integrated with any existing self-supervised objective for RL. We demonstrate this across several online and offline RL benchmarks, along with a real robot arm task, where we find that compressed representations with RepDIB can lead to strong performance improvements, as the learned bottlenecks help predict only the relevant state while ignoring irrelevant information.

Accurately inferring Gene Regulatory Networks (GRNs) is a critical and challenging task in biology. GRNs model the activatory and inhibitory interactions between genes and are inherently causal in nature. To accurately identify GRNs, perturbational data is required. However, most GRN discovery methods only operate on observational data. Recent advances in neural network-based causal discovery methods have significantly improved causal discovery, including handling interventional data, improvements in performance and scalability. However, applying state-of-the-art (SOTA) causal discovery methods in biology poses challenges, such as noisy data and a large number of samples. Thus, adapting the causal discovery methods is necessary to handle these challenges. In this paper, we introduce DiscoGen, a neural network-based GRN discovery method that can denoise gene expression measurements and handle interventional data. We demonstrate that our model outperforms SOTA neural network-based causal discovery methods.

Self-Supervised Learning (SSL) methods operate on unlabeled data to learn robust representations useful for downstream tasks. Most SSL methods rely on augmentations obtained by transforming the 2D image pixel map. These augmentations ignore the fact that biological vision takes place in an immersive three-dimensional, temporally contiguous environment, and that low-level biological vision relies heavily on depth cues. Using a signal provided by a pretrained state-of-the-art monocular RGB-to-depth model (the Depth Prediction Transformer, Ranftl et al., 2021), we explore two distinct approaches to incorporating depth signals into the SSL framework. First, we evaluate contrastive learning using an RGB+depth input representation. Second, we use the depth signal to generate novel views from slightly different camera positions, thereby producing a 3D augmentation for contrastive learning. We evaluate these two approaches on three different SSL methods--BYOL, SimSiam, and SwAV--using ImageNette (10 class subset of ImageNet), ImageNet-100 and ImageNet-1k datasets. We find that both approaches to incorporating depth signals improve the robustness and generalization of the baseline SSL methods, though the first approach (with depth-channel concatenation) is superior. For instance, BYOL with the additional depth channel leads to an increase in downstream classification accuracy from 85.3% to 88.0% on ImageNette and 84.1% to 87.0% on ImageNet-C. Biological vision systems evolved in and interact with a three-dimensional world. As an individual moves through the environment, the relative distance of objects is indicated by rich signals extracted by the visual system, from motion parallax to binocular disparity to occlusion cues. These signals play a role in early development to bootstrap an infant's ability to perceive objects in visual scenes (Spelke, 1990; Spelke & Kinzler, 2007) and to reason about physical interactions between objects (Baillargeon, 2004). In the mature visual system, features predictive of occlusion and three-dimensional structure are extracted early and in parallel in the visual processing stream (Enns & Rensink, 1990; 1991), and early vision uses monocular cues to rapidly complete partially-occluded objects (Rensink & Enns, 1998) and binocular cues to guide attention (Nakayama & Silverman, 1986). In short, biological vision systems are designed to leverage the three-dimensional structure of the environment. In contrast, machine vision systems typically consider a 2D RGB image or a sequence of 2D RGB frames to be the relevant signal.

Goal-conditioned reinforcement learning (RL) is a promising direction for training agents that are capable of solving multiple tasks and reach a diverse set of objectives. How to \textit{specify} and \textit{ground} these goals in such a way that we can both reliably reach goals during training as well as generalize to new goals during evaluation remains an open area of research. Defining goals in the space of noisy and high-dimensional sensory inputs poses a challenge for training goal-conditioned agents, or even for generalization to novel goals. We propose to address this by learning factorial representations of goals and processing the resulting representation via a discretization bottleneck, for coarser goal specification, through an approach we call DGRL. We show that applying a discretizing bottleneck can improve performance in goal-conditioned RL setups, by experimentally evaluating this method on tasks ranging from maze environments to complex robotic navigation and manipulation. Additionally, we prove a theorem lower-bounding the expected return on out-of-distribution goals, while still allowing for specifying goals with expressive combinatorial structure.

The fundamental challenge in causal induction is to infer the underlying graph structure given observational and/or interventional data. Most existing causal induction algorithms operate by generating candidate graphs and evaluating them using either score-based methods (including continuous optimization) or independence tests. In our work, we instead treat the inference process as a black box and design a neural network architecture that learns the mapping from both observational and interventional data to graph structures via supervised training on synthetic graphs. The learned model generalizes to new synthetic graphs, is robust to train-test distribution shifts, and achieves state-of-the-art performance on naturalistic graphs for low sample complexity.

Learning models that offer robust out-of-distribution generalization and fast adaptation is a key challenge in modern machine learning. Modelling causal structure into neural networks holds the promise to accomplish robust zero and few-shot adaptation. Recent advances in differentiable causal discovery have proposed to factorize the data generating process into a set of modules, i.e. one module for the conditional distribution of every variable where only causal parents are used as predictors. Such a modular decomposition of knowledge enables adaptation to distributions shifts by only updating a subset of parameters. In this work, we systematically study the generalization and adaption performance of such modular neural causal models by comparing it to monolithic models and structured models where the set of predictors is not constrained to causal parents. Our analysis shows that the modular neural causal models outperform other models on both zero and few-shot adaptation in low data regimes and offer robust generalization. We also found that the effects are more significant for sparser graphs as compared to denser graphs.

Discovering causal structures from data is a challenging inference problem of fundamental importance in all areas of science. The appealing scaling properties of neural networks have recently led to a surge of interest in differentiable neural network-based methods for learning causal structures from data. So far differentiable causal discovery has focused on static datasets of observational or interventional origin. In this work, we introduce an active intervention-targeting mechanism which enables a quick identification of the underlying causal structure of the data-generating process. Our method significantly reduces the required number of interactions compared with random intervention targeting and is applicable for both discrete and continuous optimization formulations of learning the underlying directed acyclic graph (DAG) from data. We examine the proposed method across a wide range of settings and demonstrate superior performance on multiple benchmarks from simulated to real-world data. Learning causal structure from data is a challenging but important task that lies at the heart of scientific reasoning and accompanying progress in many disciplines (Sachs et al., 2005; Hill et al., 2016; Lauritzen & Spiegelhalter, 1988; Korb & Nicholson, 2010). While there exists a plethora of methods for the task, computationally and statistically more efficient algorithms are highly desired (Heinze-Deml et al., 2018). As a result, there has been a surge in interest in differentiable structure learning and the combination of deep learning and causal inference (Schölkopf et al., 2021). However, the improvement critically depends on the experiments and interventions available. Despite advances in high-throughput methods for interventional data in specific fields (Dixit et al., 2016), the acquisition of interventional samples in the general settings tends to be costly, technically impossible or even unethical for specific interventions.

Deep learning has advanced from fully connected architectures to structured models organized into components, e.g., the transformer composed of positional elements, modular architectures divided into slots, and graph neural nets made up of nodes. In structured models, an interesting question is how to conduct dynamic and possibly sparse communication among the separate components. Here, we explore the hypothesis that restricting the transmitted information among components to discrete representations is a beneficial bottleneck. The motivating intuition is human language in which communication occurs through discrete symbols. Even though individuals have different understandings of what a "cat" is based on their specific experiences, the shared discrete token makes it possible for communication among individuals to be unimpeded by individual differences in internal representation. To discretize the values of concepts dynamically communicated among specialist components, we extend the quantization mechanism from the Vector-Quantized Variational Autoencoder to multi-headed discretization with shared codebooks and use it for discrete-valued neural communication (DVNC). Our experiments show that DVNC substantially improves systematic generalization in a variety of architectures -- transformers, modular architectures, and graph neural networks. We also show that the DVNC is robust to the choice of hyperparameters, making the method very useful in practice. Moreover, we establish a theoretical justification of our discretization process, proving that it has the ability to increase noise robustness and reduce the underlying dimensionality of the model.

Learning the causal structure that underlies data is a crucial step towards robust real-world decision making. The majority of existing work in causal inference focuses on determining a single directed acyclic graph (DAG) or a Markov equivalence class thereof. However, a crucial aspect to acting intelligently upon the knowledge about causal structure which has been inferred from finite data demands reasoning about its uncertainty. For instance, planning interventions to find out more about the causal mechanisms that govern our data requires quantifying epistemic uncertainty over DAGs. While Bayesian causal inference allows to do so, the posterior over DAGs becomes intractable even for a small number of variables. Aiming to overcome this issue, we propose a form of variational inference over the graphs of Structural Causal Models (SCMs). To this end, we introduce a parametric variational family modelled by an autoregressive distribution over the space of discrete DAGs. Its number of parameters does not grow exponentially with the number of variables and can be tractably learned by maximising an Evidence Lower Bound (ELBO). In our experiments, we demonstrate that the proposed variational posterior is able to provide a good approximation of the true posterior.