Technology
Structural and Functional Discovery in Dynamic Networks with Non-negative Matrix Factorization
Mankad, Shawn, Michailidis, George
Due to advances in data collection technologies, it is becoming increasingly common to study time series of networks. An important research question is how to discover the underlying structure and dynamics in time-varying networked systems. In this work, we propose a new matrix factorization-based approach for community discovery and visual exploration within potentially weighted and directed network time-series. Next, we review and discuss this work in relation to popular approaches for addressing the key problems of community detection and visualization of time series of networks. There have been many important contributions for community detection in network time-series, extensively reviewed in [1, 2], from the fields of physics, computer science and statistics. The basic goal of community detection is to extract groups of nodes that feature relatively dense within group connectivity and sparser between group connections [3, 4]. A common strategy is to embed the graphs in low-dimensional latent spaces. For instance, [5] use latent variables to capture groups of papers that evolve similarly in citation network data.
Rotation invariants of two dimensional curves based on iterated integrals
We introduce a novel class of rotation invariants of two dimensional curves based on iterated integrals. The invariants we present are in some sense complete and we describe an algorithm to calculate them, giving explicit computations up to order six. We present an application to online (stroke-trajectory based) character recognition. This seems to be the first time in the literature that the use of iterated integrals of a curve is proposed for (invariant) feature extraction in machine learning applications.
The Expressive Power of Word Embeddings
Chen, Yanqing, Perozzi, Bryan, Al-Rfou, Rami, Skiena, Steven
We seek to better understand the difference in quality of the several publicly released embeddings. We propose several tasks that help to distinguish the characteristics of different embeddings. Our evaluation of sentiment polarity and synonym/antonym relations shows that embeddings are able to capture surprisingly nuanced semantics even in the absence of sentence structure. Moreover, benchmarking the embeddings shows great variance in quality and characteristics of the semantics captured by the tested embeddings. Finally, we show the impact of varying the number of dimensions and the resolution of each dimension on the effective useful features captured by the embedding space. Our contributions highlight the importance of embeddings for NLP tasks and the effect of their quality on the final results.
An estimation of distribution algorithm with adaptive Gibbs sampling for unconstrained global optimization
Velasco, Jonás, Saucedo-Espinosa, Mario A., Escalante, Hugo Jair, Mendoza, Karlo, Villarreal-Rodríguez, César Emilio, Chacón-Mondragón, Óscar L., Rodríguez, Adrián, Berrones, Arturo
In this paper is proposed a new heuristic approach belonging to the field of evolutionary Estimation of Distribution Algorithms (EDAs). EDAs builds a probability model and a set of solutions is sampled from the model which characterizes the distribution of such solutions. The main framework of the proposed method is an estimation of distribution algorithm, in which an adaptive Gibbs sampling is used to generate new promising solutions and, in combination with a local search strategy, it improves the individual solutions produced in each iteration. The Estimation of Distribution Algorithm with Adaptive Gibbs Sampling we are proposing in this paper is called AGEDA. We experimentally evaluate and compare this algorithm against two deterministic procedures and several stochastic methods in three well known test problems for unconstrained global optimization. It is empirically shown that our heuristic is robust in problems that involve three central aspects that mainly determine the difficulty of global optimization problems, namely high-dimensionality, multi-modality and non-smoothness.
Distributed Reasoning for Multiagent Simple Temporal Problems
Boerkoel Jr., J. C., Durfee, E. H.
This research focuses on building foundational algorithms for scheduling agents that assist people in managing their activities in environments where tempo and complex activity interdependencies outstrip people's cognitive capacity. We address the critical challenge of reasoning over individuals' interacting schedules to efficiently answer queries about how to meet scheduling goals while respecting individual privacy and autonomy to the extent possible. We formally define the Multiagent Simple Temporal Problem for naturally capturing and reasoning over the distributed but interconnected scheduling problems of multiple individuals. Our hypothesis is that combining bottom-up and top-down approaches will lead to effective solution techniques. In our bottom-up phase, an agent externalizes constraints that compactly summarize how its local subproblem affects other agents' subproblems, whereas in our top-down phase an agent proactively constructs and internalizes new local constraints that decouple its subproblem from others'. We confirm this hypothesis by devising distributed algorithms that calculate summaries of the joint solution space for multiagent scheduling problems, without centralizing or otherwise redistributing the problems. The distributed algorithms permit concurrent execution to achieve significant speedup over the current art and also increase the level of privacy and independence in individual agent reasoning. These algorithms are most advantageous for problems where interactions between the agents are sparse compared to the complexity of agents' individual problems.
Normalized Online Learning
Ross, Stephane, Mineiro, Paul, Langford, John
We introduce online learning algorithms which are independent of feature scales, proving regret bounds dependent on the ratio of scales existent in the data rather than the absolute scale. This has several useful effects: there is no need to pre-normalize data, the test-time and test-space complexity are reduced, and the algorithms are more robust.
Reinforcement Learning for the Soccer Dribbling Task
Carvalho, Arthur, Oliveira, Renato
We propose a reinforcement learning solution to the \emph{soccer dribbling task}, a scenario in which a soccer agent has to go from the beginning to the end of a region keeping possession of the ball, as an adversary attempts to gain possession. While the adversary uses a stationary policy, the dribbler learns the best action to take at each decision point. After defining meaningful variables to represent the state space, and high-level macro-actions to incorporate domain knowledge, we describe our application of the reinforcement learning algorithm \emph{Sarsa} with CMAC for function approximation. Our experiments show that, after the training period, the dribbler is able to accomplish its task against a strong adversary around 58% of the time.
Joint and individual variation explained (JIVE) for integrated analysis of multiple data types
Lock, Eric F., Hoadley, Katherine A., Marron, J. S., Nobel, Andrew B.
Research in several fields now requires the analysis of data sets in which multiple high-dimensional types of data are available for a common set of objects. In particular, The Cancer Genome Atlas (TCGA) includes data from several diverse genomic technologies on the same cancerous tumor samples. In this paper we introduce Joint and Individual Variation Explained (JIVE), a general decomposition of variation for the integrated analysis of such data sets. The decomposition consists of three terms: a low-rank approximation capturing joint variation across data types, low-rank approximations for structured variation individual to each data type, and residual noise. JIVE quantifies the amount of joint variation between data types, reduces the dimensionality of the data and provides new directions for the visual exploration of joint and individual structures. The proposed method represents an extension of Principal Component Analysis and has clear advantages over popular two-block methods such as Canonical Correlation Analysis and Partial Least Squares. A JIVE analysis of gene expression and miRNA data on Glioblastoma Multiforme tumor samples reveals gene-miRNA associations and provides better characterization of tumor types. Data and software are available at https://genome.unc.edu/jive/
On some interrelations of generalized $q$-entropies and a generalized Fisher information, including a Cram\'er-Rao inequality
In this communication, we describe some interrelations between generalized $q$-entropies and a generalized version of Fisher information. In information theory, the de Bruijn identity links the Fisher information and the derivative of the entropy. We show that this identity can be extended to generalized versions of entropy and Fisher information. More precisely, a generalized Fisher information naturally pops up in the expression of the derivative of the Tsallis entropy. This generalized Fisher information also appears as a special case of a generalized Fisher information for estimation problems. Indeed, we derive here a new Cram\'er-Rao inequality for the estimation of a parameter, which involves a generalized form of Fisher information. This generalized Fisher information reduces to the standard Fisher information as a particular case. In the case of a translation parameter, the general Cram\'er-Rao inequality leads to an inequality for distributions which is saturated by generalized $q$-Gaussian distributions. These generalized $q$-Gaussians are important in several areas of physics and mathematics. They are known to maximize the $q$-entropies subject to a moment constraint. The Cram\'er-Rao inequality shows that the generalized $q$-Gaussians also minimize the generalized Fisher information among distributions with a fixed moment. Similarly, the generalized $q$-Gaussians also minimize the generalized Fisher information among distributions with a given $q$-entropy.
Some results on a $\chi$-divergence, an~extended~Fisher information and~generalized~Cram\'er-Rao inequalities
We propose a modified $\chi^{\beta}$-divergence, give some of its properties, and show that this leads to the definition of a generalized Fisher information. We give generalized Cram\'er-Rao inequalities, involving this Fisher information, an extension of the Fisher information matrix, and arbitrary norms and power of the estimation error. In the case of a location parameter, we obtain new characterizations of the generalized $q$-Gaussians, for instance as the distribution with a given moment that minimizes the generalized Fisher information. Finally we indicate how the generalized Fisher information can lead to new uncertainty relations.