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Hierarchical Probabilistic Principal Component Analysis of Longitudinal Data

arXiv.org Machine Learning

In many longitudinal studies, a large number of variables are measured repeatedly over time, with substantial missing data. Existing methods, such as probabilistic principal component analysis (PPCA), are ill-equipped to handle such incomplete, high-dimensional longitudinal data, as they fail to account for the nested sources of variation and temporal dependency inherent in repeated measures. We introduce hierarchical probabilistic principal component analysis (HPPCA), a two-level probabilistic factor model that explicitly separates between-subject variance from time-varying within-subject dynamics. The within-subject latent factors are modeled by a Gaussian process. We develop an EM algorithm to handle missing data and flexible covariance kernels, accelerated by computationally efficient initializers. Simulation studies demonstrated that HPPCA robustly recovers model parameters subspaces and substantially outperforms both standard PPCA and multivariate functional PCA in imputation accuracy, even under heavy missingness and model misspecification. An application to the long COVID symptoms in the Researching COVID to Enhance Recovery adult cohort revealed that HPPCA effectively captured the data's hierarchical structure and its learned features significantly improved the prediction of clinical outcomes and the recovery of masked clinical records compared to exisiting methods.


Nonparametric Estimation of Isotropic Covariance Function

arXiv.org Machine Learning

A nonparametric model using a sequence of Bernstein polynomials is constructed to approximate arbitrary isotropic covariance functions valid in $\mathbb{R}^\infty$ and related approximation properties are investigated using the popular $L_{\infty}$ norm and $L_2$ norms. A computationally efficient sieve maximum likelihood (sML) estimation is then developed to nonparametrically estimate the unknown isotropic covaraince function valid in $\mathbb{R}^\infty$. Consistency of the proposed sieve ML estimator is established under increasing domain regime. The proposed methodology is compared numerically with couple of existing nonparametric as well as with commonly used parametric methods. Numerical results based on simulated data show that our approach outperforms the parametric methods in reducing bias due to model misspecification and also the nonparametric methods in terms of having significantly lower values of expected $L_{\infty}$ and $L_2$ norms. Application to precipitation data is illustrated to showcase a real case study. Additional technical details and numerical illustrations are also made available.


Pliable rejection sampling

arXiv.org Machine Learning

Rejection sampling is a technique for sampling from difficult distributions. However, its use is limited due to a high rejection rate. Common adaptive rejection sampling methods either work only for very specific distributions or without performance guarantees. In this paper, we present pliable rejection sampling (PRS), a new approach to rejection sampling, where we learn the sampling proposal using a kernel estimator. Since our method builds on rejection sampling, the samples obtained are with high probability i.i.d. and distributed according to f. Moreover, PRS comes with a guarantee on the number of accepted samples.


Explanation of Dynamic Physical Field Predictions using WassersteinGrad: Application to Autoregressive Weather Forecasting

arXiv.org Machine Learning

As the demand to integrate Artificial Intelligence into high-stakes environments continues to grow, explaining the reasoning behind neural-network predictions has shifted from a theoretical curiosity to a strict operational requirement. Our work is motivated by the explanations of autoregressive neural predictions on dynamic physical fields, as in weather forecasting. Gradient-based feature attribution methods are widely used to explain the predictions on such data, in particular due to their scalability to high-dimensional inputs. It is also interesting to remark that gradient-based techniques such as SmoothGrad are now standard on images to robustify the explanations using pointwise averages of the attribution maps obtained from several noised inputs. Our goal is to efficiently adapt this aggregation strategy to dynamic physical fields. To do so, our first contribution is to identify a fundamental failure mode when averaging perturbed attribution maps on dynamic physical fields: stochastic input perturbations do not induce stationary amplitude noise in attribution maps, but instead cause a geometric displacement of the attributions. Consequently, pointwise averaging blurs these spatially misaligned features. To tackle this issue, we introduce WassersteinGrad, which extracts a geometric consensus of perturbed attribution maps by computing their entropic Wasserstein barycenter. The results, obtained on regional weather data and a meteorologist-validated neural model, demonstrate promising explainability properties of WassersteinGrad over gradient-based baselines across both single-step and autoregressive forecasting settings.


Mixed Membership sub-Gaussian Models

arXiv.org Machine Learning

The Gaussian mixture model is widely used in unsupervised learning, owing to its simplicity and interpretability. However, a fundamental limitation of the classical Gaussian mixture model is that it forces each observation to belong to exactly one component. In many practical applications, such as genetics, social network analysis, and text mining, an observation may naturally belong to multiple components or exhibit partial membership in several latent components. To overcome this limitation, we propose the mixed membership sub-Gaussian model, which extends the classical Gaussian mixture framework by allowing each observation to belong to multiple components. This model inherits the interpretability of the classical Gaussian mixture model while offering greater flexibility for capturing complex overlapping structures. We develop an efficient spectral algorithm to estimate the mixed membership of each individual observation, and under mild separation conditions on the component centres, we prove that the estimation error of the per-individual membership vector can be made arbitrarily small with high probability. To our knowledge, this is the first work to provide a computationally efficient estimator with such a vanishing-error guarantee for a mixed-membership extension of the Gaussian mixture model. Extensive experimental studies demonstrate that our method outperforms existing approaches that ignore mixed memberships.


CLVAE: A Variational Autoencoder for Long-Term Customer Revenue Forecasting

arXiv.org Machine Learning

Predicting customers' long-term revenue from sparse and irregular transaction data is central to marketing resource allocation in non-contractual settings, yet existing approaches face a trade-off. Traditional probabilistic customer base models deliver robust long-horizon forecasts by imposing strong structural assumptions, while flexible machine-learning models often require substantial training data and careful tuning. We propose a variational-autoencoder-based model that preserves the process-based likelihood of established attrition-transaction-spend models conditional on customer heterogeneity, but replaces the restrictive parametric mixing distribution with a flexible latent representation learned by encoder-decoder networks. The resulting approach (i) provides a single model for customer attrition, transactions and spending, (ii) remains reliable when contextual covariates are unavailable, and (iii) flexibly incorporates rich covariates and nonlinear effects when they are available. This design balances structural stability with the flexibility needed to capture complex purchase dynamics. Across multiple real-world datasets and prediction horizons, the proposed model improves upon the latest benchmarks. Businesses benefit directly, as a better assessment of customers' future revenues improves the efficiency of campaign targeting. For research, this work provides guidance on how to embed domain-specific models into the variational autoencoder framework, enabling flexible representation learning while retaining an econometrically meaningful process structure.





Canada's Carney has enjoyed a long political honeymoon. Now comes the test

BBC News

Canada's Carney has enjoyed a long political honeymoon. Mark Carney arrived on Canada's political scene last year as an Ivy League and Oxford educated economist and a former central banker for two countries. He had an impressive resume and ambitions to be prime minister but had never run for public office until replacing Justin Trudeau as Liberal leader. There was concern his lack of political experience would be a liability, but under his leadership, the Liberals won a minority government, which in a year had solidified into a narrow majority following the defection of five opposition members of parliament to his party. Carney tore up the rulebook, jumping from political neophyte to leading a G7 nation, and he is enjoying a lengthy honeymoon both in Canada and around the world as a globetrotting prime minister.