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 Bayesian Inference


Majorization for CRFs and Latent Likelihoods

Neural Information Processing Systems

The partition function plays a key role in probabilistic modeling including conditional random fields, graphical models, and maximum likelihood estimation. To optimize partition functions, this article introduces a quadratic variational upper bound. This inequality facilitates majorization methods: optimization of complicated functions through the iterative solution of simpler sub-problems. Such bounds remain efficient to compute even when the partition function involves a graphical model (with small tree-width) or in latent likelihood settings. For large-scale problems, low-rank versions of the bound are provided and outperform LBFGS as well as first-order methods.


Truncation-free Online Variational Inference for Bayesian Nonparametric Models

Neural Information Processing Systems

We present a truncation-free online variational inference algorithm for Bayesian nonparametric models. Unlike traditional (online) variational inference algorithms that require truncations for the model or the variational distribution, our method adapts model complexity on the fly. Our experiments for Dirichlet process mixture models and hierarchical Dirichlet process topic models on two large-scale data sets show better performance than previous online variational inference algorithms. Papers published at the Neural Information Processing Systems Conference.


Unifying Non-Maximum Likelihood Learning Objectives with Minimum KL Contraction

Neural Information Processing Systems

When used to learn high dimensional parametric probabilistic models, the clas- sical maximum likelihood (ML) learning often suffers from computational in- tractability, which motivates the active developments of non-ML learning meth- ods. Yet, because of their divergent motivations and forms, the objective func- tions of many non-ML learning methods are seemingly unrelated, and there lacks a unified framework to understand them. In this work, based on an information geometric view of parametric learning, we introduce a general non-ML learning principle termed as minimum KL contraction, where we seek optimal parameters that minimizes the contraction of the KL divergence between the two distributions after they are transformed with a KL contraction operator. We then show that the objective functions of several important or recently developed non-ML learn- ing methods, including contrastive divergence [12], noise-contrastive estimation [11], partial likelihood [7], non-local contrastive objectives [31], score match- ing [14], pseudo-likelihood [3], maximum conditional likelihood [17], maximum mutual information [2], maximum marginal likelihood [9], and conditional and marginal composite likelihood [24], can be unified under the minimum KL con- traction framework with different choices of the KL contraction operators. Papers published at the Neural Information Processing Systems Conference.


Computationally and statistically efficient learning of causal Bayes nets using path queries

Neural Information Processing Systems

Causal discovery from empirical data is a fundamental problem in many scientific domains. Observational data allows for identifiability only up to Markov equivalence class. In this paper we first propose a polynomial time algorithm for learning the exact correctly-oriented structure of the transitive reduction of any causal Bayesian network with high probability, by using interventional path queries. Each path query takes as input an origin node and a target node, and answers whether there is a directed path from the origin to the target. This is done by intervening on the origin node and observing samples from the target node.


Learning Temporal Point Processes via Reinforcement Learning

Neural Information Processing Systems

Social goods, such as healthcare, smart city, and information networks, often produce ordered event data in continuous time. The generative processes of these event data can be very complex, requiring flexible models to capture their dynamics. Temporal point processes offer an elegant framework for modeling event data without discretizing the time. However, the existing maximum-likelihood-estimation (MLE) learning paradigm requires hand-crafting the intensity function beforehand and cannot directly monitor the goodness-of-fit of the estimated model in the process of training. To alleviate the risk of model-misspecification in MLE, we propose to generate samples from the generative model and monitor the quality of the samples in the process of training until the samples and the real data are indistinguishable.


Thermostat-assisted continuously-tempered Hamiltonian Monte Carlo for Bayesian learning

Neural Information Processing Systems

In this paper, we propose a novel sampling method, the thermostat-assisted continuously-tempered Hamiltonian Monte Carlo, for the purpose of multimodal Bayesian learning. It simulates a noisy dynamical system by incorporating both a continuously-varying tempering variable and the Nos\'e-Hoover thermostats. A significant benefit is that it is not only able to efficiently generate i.i.d. While the properties of the approach have been studied using synthetic datasets, our experiments on three real datasets have also shown its performance gains over several strong baselines for Bayesian learning with various types of neural networks plunged in. Papers published at the Neural Information Processing Systems Conference.


Benefits of over-parameterization with EM

Neural Information Processing Systems

Expectation Maximization (EM) is among the most popular algorithms for maximum likelihood estimation, but it is generally only guaranteed to find its stationary points of the log-likelihood objective. The goal of this article is to present theoretical and empirical evidence that over-parameterization can help EM avoid spurious local optima in the log-likelihood. We consider the problem of estimating the mean vectors of a Gaussian mixture model in a scenario where the mixing weights are known. Our study shows that the global behavior of EM, when one uses an over-parameterized model in which the mixing weights are treated as unknown, is better than that when one uses the (correct) model with the mixing weights fixed to the known values. For symmetric Gaussians mixtures with two components, we prove that introducing the (statistically redundant) weight parameters enables EM to find the global maximizer of the log-likelihood starting from almost any initial mean parameters, whereas EM without this over-parameterization may very often fail.


Learning and Inference in Hilbert Space with Quantum Graphical Models

Neural Information Processing Systems

Quantum Graphical Models (QGMs) generalize classical graphical models by adopting the formalism for reasoning about uncertainty from quantum mechanics. Unlike classical graphical models, QGMs represent uncertainty with density matrices in complex Hilbert spaces. Hilbert space embeddings (HSEs) also generalize Bayesian inference in Hilbert spaces. We investigate the link between QGMs and HSEs and show that the sum rule and Bayes rule for QGMs are equivalent to the kernel sum rule in HSEs and a special case of Nadaraya-Watson kernel regression, respectively. We show that these operations can be kernelized, and use these insights to propose a Hilbert Space Embedding of Hidden Quantum Markov Models (HSE-HQMM) to model dynamics.


Predictive Approximate Bayesian Computation via Saddle Points

Neural Information Processing Systems

Approximate Bayesian computation (ABC) is an important methodology for Bayesian inference when the likelihood function is intractable. Sampling-based ABC algorithms such as rejection- and K2-ABC are inefficient when the parameters have high dimensions, while the regression-based algorithms such as K- and DR-ABC are hard to scale. In this paper, we introduce an optimization-based ABC framework that addresses these deficiencies. Leveraging a generative model for posterior and joint distribution matching, we show that ABC can be framed as saddle point problems, whose objectives can be accessed directly with samples. We present the predictive ABC algorithm (P-ABC), and provide a probabilistically approximately correct (PAC) bound that guarantees its learning consistency.


Reinforcement Learning with Multiple Experts: A Bayesian Model Combination Approach

Neural Information Processing Systems

Potential based reward shaping is a powerful technique for accelerating convergence of reinforcement learning algorithms. Typically, such information includes an estimate of the optimal value function and is often provided by a human expert or other sources of domain knowledge. However, this information is often biased or inaccurate and can mislead many reinforcement learning algorithms. In this paper, we apply Bayesian Model Combination with multiple experts in a way that learns to trust a good combination of experts as training progresses. This approach is both computationally efficient and general, and is shown numerically to improve convergence across discrete and continuous domains and different reinforcement learning algorithms.