Over the last few decades, various methods have been proposed for estimating prediction intervals in regression settings, including Bayesian methods, ensemble methods, direct interval estimation methods and conformal prediction methods. An important issue is the calibration of these methods: the generated prediction intervals should have a predefined coverage level, without being overly conservative. In this work, we review the above four classes of methods from a conceptual and experimental point of view. Results on benchmark data sets from various domains highlight large fluctuations in performance from one data set to another. These observations can be attributed to the violation of certain assumptions that are inherent to some classes of methods. We illustrate how conformal prediction can be used as a general calibration procedure for methods that deliver poor results without a calibration step.

This paper surveys the area of Trust Metrics related to security for autonomous robotic systems. As the robotics industry undergoes a transformation from programmed, task oriented, systems to Artificial Intelligence-enabled learning, these autonomous systems become vulnerable to several security risks, making a security assessment of these systems of critical importance. Therefore, our focus is on a holistic approach for assessing system trust which requires incorporating system, hardware, software, cognitive robustness, and supplier level trust metrics into a unified model of trust. We set out to determine if there were already trust metrics that defined such a holistic system approach. While there are extensive writings related to various aspects of robotic systems such as, risk management, safety, security assurance and so on, each source only covered subsets of an overall system and did not consistently incorporate the relevant costs in their metrics. This paper attempts to put this prior work into perspective, and to show how it might be extended to develop useful system-level trust metrics for evaluating complex robotic (and other) systems.

In this thesis, we explore and apply methods inspired by the free energy principle to two important areas in machine learning and neuroscience. The free energy principle is a general mathematical theory of the necessary information-theoretic behaviours of systems which maintain a separation from their environment. A core postulate of the theory is that complex systems can be seen as performing variational Bayesian inference and minimizing an information-theoretic quantity called the variational free energy. The free energy principle originated in, and has been extremely influential in theoretical neuroscience, having spawned a number of neurophysiologically realistic process theories, and maintaining close links with Bayesian Brain viewpoints. The thesis is split into three main parts where we apply methods and insights from the free energy principle to understand questions first in perception, then action, and finally learning. Specifically, in the first section, we focus on the theory of predictive coding, a neurobiologically plausible process theory derived from the free energy principle under certain assumptions, which argues that the primary function of the brain is to minimize prediction errors. We focus on scaling up predictive coding architectures and simulate large-scale predictive coding networks for perception on machine learning benchmarks; we investigate predictive coding's relationship to other classical filtering algorithms, and we demonstrate that many biologically implausible aspects of current models of predictive coding can be relaxed without unduly harming the performance of predictive coding models which allows for a potentially more literal translation of predictive coding theory into cortical microcircuits. In the second part of the thesis, we focus on the application of methods deriving from the free energy principle to action. We study the extension of methods of'active inference', a neurobiologically grounded account of action through variational message passing, to utilize deep artificial neural networks, allowing these methods to'scale up' to be competitive with state of the art deep reinforcement learning methods.

Current domain-independent, classical planners require symbolic models of the problem domain and instance as input, resulting in a knowledge acquisition bottleneck. Meanwhile, although deep learning has achieved significant success in many fields, the knowledge is encoded in a subsymbolic representation which is incompatible with symbolic systems such as planners. We propose Latplan, an unsupervised architecture combining deep learning and classical planning. Given only an unlabeled set of image pairs showing a subset of transitions allowed in the environment (training inputs), Latplan learns a complete propositional PDDL action model of the environment. Later, when a pair of images representing the initial and the goal states (planning inputs) is given, Latplan finds a plan to the goal state in a symbolic latent space and returns a visualized plan execution. We evaluate Latplan using image-based versions of 6 planning domains: 8-puzzle, 15-Puzzle, Blocksworld, Sokoban and Two variations of LightsOut.

Machine learning (ML), is the study of computer algorithms, that improve automatically through experience and by the use of data. It is seen as a part of artificial intelligence. Machine learning algorithms, build a model based on sample data, known as "training data", in order to make predictions or decisions without being explicitly programmed to do so. Machine learning algorithms are used in a wide variety of applications, such as in medicine, email filtering, speech recognition, and computer vision, where it is difficult or unfeasible to develop conventional algorithms to perform the needed tasks. In simple words, machine learning is a subset under the broad umbrella of artificial intelligence.

Bayesian variable selection is a powerful tool for data analysis, as it offers a principled method for variable selection that accounts for prior information and uncertainty. However, wider adoption of Bayesian variable selection has been hampered by computational challenges, especially in difficult regimes with a large number of covariates or non-conjugate likelihoods. Generalized linear models for count data, which are prevalent in biology, ecology, economics, and beyond, represent an important special case. Here we introduce an efficient MCMC scheme for variable selection in binomial and negative binomial regression that exploits Tempered Gibbs Sampling (Zanella and Roberts, 2019) and that includes logistic regression as a special case. In experiments we demonstrate the effectiveness of our approach, including on cancer data with seventeen thousand covariates.

The widespread use of machine learning algorithms calls for automatic change detection algorithms to monitor their behavior over time. As a machine learning algorithm learns from a continuous, possibly evolving, stream of data, it is desirable and often critical to supplement it with a companion change detection algorithm to facilitate its monitoring and control. We present a generic score-based change detection method that can detect a change in any number of components of a machine learning model trained via empirical risk minimization. This proposed statistical hypothesis test can be readily implemented for such models designed within a differentiable programming framework. We establish the consistency of the hypothesis test and show how to calibrate it to achieve a prescribed false alarm rate. We illustrate the versatility of the approach on synthetic and real data.

While multifidelity modeling provides a cost-effective way to conduct uncertainty quantification with computationally expensive models, much greater efficiency can be achieved by adaptively deciding the number of required high-fidelity (HF) simulations, depending on the type and complexity of the problem and the desired accuracy in the results. We propose a framework for active learning with multifidelity modeling emphasizing the efficient estimation of rare events. Our framework works by fusing a low-fidelity (LF) prediction with an HF-inferred correction, filtering the corrected LF prediction to decide whether to call the high-fidelity model, and for enhanced subsequent accuracy, adapting the correction for the LF prediction after every HF model call. The framework does not make any assumptions as to the LF model type or its correlations with the HF model. In addition, for improved robustness when estimating smaller failure probabilities, we propose using dynamic active learning functions that decide when to call the HF model. We demonstrate our framework using several academic case studies and two finite element (FE) model case studies: estimating Navier-Stokes velocities using the Stokes approximation and estimating stresses in a transversely isotropic model subjected to displacements via a coarsely meshed isotropic model. Across these case studies, not only did the proposed framework estimate the failure probabilities accurately, but compared with either Monte Carlo or a standard variance reduction method, it also required only a small fraction of the calls to the HF model.

This paper describes a new library for learning Bayesian networks from data containing discrete and continuous variables (mixed data). In addition to the classical learning methods on discretized data, this library proposes its algorithm that allows structural learning and parameters learning from mixed data without discretization since data discretization leads to information loss. This algorithm based on mixed MI score function for structural learning, and also linear regression and Gaussian distribution approximation for parameters learning. The library also offers two algorithms for enumerating graph structures - the greedy Hill-Climbing algorithm and the evolutionary algorithm. Thus the key capabilities of the proposed library are as follows: (1) structural and parameters learning of a Bayesian network on discretized data, (2) structural and parameters learning of a Bayesian network on mixed data using the MI mixed score function and Gaussian approximation, (3) launching learning algorithms on one of two algorithms for enumerating graph structures - Hill-Climbing and the evolutionary algorithm. Since the need for mixed data representation comes from practical necessity, the advantages of our implementations are evaluated in the context of solving approximation and gap recovery problems on synthetic data and real datasets.

This paper explores the use of factor graphs as an inference and analysis tool for Bayesian peer-to-peer decentralized data fusion. We propose a framework by which agents can each use local factor graphs to represent relevant partitions of a complex global joint probability distribution, thus allowing them to avoid reasoning over the entirety of a more complex model and saving communication as well as computation cost. This allows heterogeneous multi-robot systems to cooperate on a variety of real world, task oriented missions, where scalability and modularity are key. To develop the initial theory and analyze the limits of this approach, we focus our attention on static linear Gaussian systems in tree-structured networks and use Channel Filters (also represented by factor graphs) to explicitly track common information. We discuss how this representation can be used to describe various multi-robot applications and to design and analyze new heterogeneous data fusion algorithms. We validate our method in simulations of a multi-agent multi-target tracking and cooperative multi-agent mapping problems, and discuss the computation and communication gains of this approach.