Bayesian Inference
On the Optimality of Vagueness: "Around", "Between", and the Gricean Maxims
Egrรฉ, Paul, Spector, Benjamin, Mortier, Adรจle, Verheyen, Steven
Why is ordinary language vague? We argue that in contexts in which a cooperative speaker is not perfectly informed about the world, the use of vague expressions can offer an optimal tradeoff between truthfulness (Gricean Quality) and informativeness (Gricean Quantity). Focusing on expressions of approximation such as "around", which are semantically vague, we show that they allow the speaker to convey indirect probabilistic information, in a way that can give the listener a more accurate representation of the information available to the speaker than any more precise expression would (intervals of the form "between"). That is, vague sentences can be more informative than their precise counterparts. We give a probabilistic treatment of the interpretation of "around", and offer a model for the interpretation and use of "around"-statements within the Rational Speech Act (RSA) framework. In our account the shape of the speaker's distribution matters in ways not predicted by the Lexical Uncertainty model standardly used in the RSA framework for vague predicates. We use our approach to draw further lessons concerning the semantic flexibility of vague expressions and their irreducibility to more precise meanings.
MIND: Maximum Mutual Information Based Neural Decoder
Tonello, Andrea M., Letizia, Nunzio A.
We are assisting at a growing interest in the development of learning architectures with application to digital communication systems. Herein, we consider the detection/decoding problem. We aim at developing an optimal neural architecture for such a task. The definition of the optimal criterion is a fundamental step. We propose to use the mutual information (MI) of the channel input-output signal pair, which yields to the minimization of the a-posteriori information of the transmitted codeword given the communication channel output observation. The computation of the a-posteriori information is a formidable task, and for the majority of channels it is unknown. Therefore, it has to be learned. For such an objective, we propose a novel neural estimator based on a discriminative formulation. This leads to the derivation of the mutual information neural decoder (MIND). The developed neural architecture is capable not only to solve the decoding problem in unknown channels, but also to return an estimate of the average MI achieved with the coding scheme, as well as the decoding error probability. Several numerical results are reported and compared with maximum a-posteriori and maximum likelihood decoding strategies.
Bayesian Variable Selection in a Million Dimensions
Bayesian variable selection is a powerful tool for data analysis, as it offers a principled method for variable selection that accounts for prior information and uncertainty. However, wider adoption of Bayesian variable selection has been hampered by computational challenges, especially in difficult regimes with a large number of covariates P or non-conjugate likelihoods. To scale to the large P regime we introduce an efficient MCMC scheme whose cost per iteration is sublinear in P. In addition we show how this scheme can be extended to generalized linear models for count data, which are prevalent in biology, ecology, economics, and beyond. In particular we design efficient algorithms for variable selection in binomial and negative binomial regression, which includes logistic regression as a special case. In experiments we demonstrate the effectiveness of our methods, including on cancer and maize genomic data.
Asymptotic Normality of Log Likelihood Ratio and Fundamental Limit of the Weak Detection for Spiked Wigner Matrices
Chung, Hye Won, Lee, Jiho, Lee, Ji Oon
We consider the problem of detecting the presence of a signal in a rank-one spiked Wigner model. For general non-Gaussian noise, assuming that the signal is drawn from the Rademacher prior, we prove that the log likelihood ratio (LR) of the spiked model against the null model converges to a Gaussian when the signal-to-noise ratio is below a certain threshold. The threshold is optimal in the sense that the reliable detection is possible by a transformed principal component analysis (PCA) above it. From the mean and the variance of the limiting Gaussian for the log LR, we compute the limit of the sum of the Type-I error and the Type-II error of the likelihood ratio test. We also prove similar results for a rank-one spiked IID model where the noise is asymmetric but the signal is symmetric.
SignalKG: Towards Reasoning about the Underlying Causes of Sensor Observations
Simmons, Anj, Vasa, Rajesh, Giardina, Antonio
This paper demonstrates our vision for knowledge graphs that assist machines to reason about the cause of signals observed by sensors. We show how the approach allows for constructing smarter surveillance systems that reason about the most likely cause (e.g., an attacker breaking a window) of a signal rather than acting directly on the received signal without consideration for how it was produced.
Addressing Census data problems in race imputation via fully Bayesian Improved Surname Geocoding and name supplements
Imai, Kosuke, Olivella, Santiago, Rosenman, Evan T. R.
Prediction of individual's race and ethnicity plays an important role in social science and public health research. Examples include studies of racial disparity in health and voting. Recently, Bayesian Improved Surname Geocoding (BISG), which uses Bayes' rule to combine information from Census surname files with the geocoding of an individual's residence, has emerged as a leading methodology for this prediction task. Unfortunately, BISG suffers from two Census data problems that contribute to unsatisfactory predictive performance for minorities. First, the decennial Census often contains zero counts for minority racial groups in the Census blocks where some members of those groups reside. Second, because the Census surname files only include frequent names, many surnames -- especially those of minorities -- are missing from the list. To address the zero counts problem, we introduce a fully Bayesian Improved Surname Geocoding (fBISG) methodology that accounts for potential measurement error in Census counts by extending the naive Bayesian inference of the BISG methodology to full posterior inference. To address the missing surname problem, we supplement the Census surname data with additional data on last, first, and middle names taken from the voter files of six Southern states where self-reported race is available. Our empirical validation shows that the fBISG methodology and name supplements significantly improve the accuracy of race imputation across all racial groups, and especially for Asians. The proposed methodology, together with additional name data, is available via the open-source software WRU.
Probabilistic Deduction: an Approach to Probabilistic Structured Argumentation
This paper introduces Probabilistic Deduction (PD) as an approach to probabilistic structured argumentation. A PD framework is composed of probabilistic rules (p-rules). As rules in classical structured argumentation frameworks, p-rules form deduction systems. In addition, p-rules also represent conditional probabilities that define joint probability distributions. With PD frameworks, one performs probabilistic reasoning by solving Rule-Probabilistic Satisfiability. At the same time, one can obtain an argumentative reading to the probabilistic reasoning with arguments and attacks. In this work, we introduce a probabilistic version of the Closed-World Assumption (P-CWA) and prove that our probabilistic approach coincides with the complete extension in classical argumentation under P-CWA and with maximum entropy reasoning. We present several approaches to compute the joint probability distribution from p-rules for achieving a practical proof theory for PD. PD provides a framework to unify probabilistic reasoning with argumentative reasoning. This is the first work in probabilistic structured argumentation where the joint distribution is not assumed form external sources.
Unsupervised Probabilistic Models for Sequential Electronic Health Records
Kaplan, Alan D., Greene, John D., Liu, Vincent X., Ray, Priyadip
EHR repositories contain large amounts of wide-ranging patient and treatment information and are essential for the development of individualized treatments in the context of disease progression [14]. With the broad adoption of EHR in the US, a large variety of data types are now routinely collected over long periods of time. This has ushered in an era of research focused on the applications and development of data-analytic tools for mining historical records of medical data to drive novel insight. Broadly, the extraction of meaningful patterns through unsupervised learning [31, 23, 17, 10] and the prediction of outcomes through supervised learning [22, 43, 41, 40, 37, 16, 13, 34, 3] are two important directions. Unsupervised methods can be applied towards many different tasks, such as prediction, imputation, and simulation; and often contain a model of the underlying structure in the data [29]. This underlying structure is not directly observed and can lead to insights that are otherwise difficult to produce, especially for large and complex data sets.
Let us Build Bridges: Understanding and Extending Diffusion Generative Models
Liu, Xingchao, Wu, Lemeng, Ye, Mao, Liu, Qiang
Diffusion-based generative models have achieved promising results recently, but raise an array of open questions in terms of conceptual understanding, theoretical analysis, algorithm improvement and extensions to discrete, structured, non-Euclidean domains. This work tries to re-exam the overall framework, in order to gain better theoretical understandings and develop algorithmic extensions for data from arbitrary domains. By viewing diffusion models as latent variable models with unobserved diffusion trajectories and applying maximum likelihood estimation (MLE) with latent trajectories imputed from an auxiliary distribution, we show that both the model construction and the imputation of latent trajectories amount to constructing diffusion bridge processes that achieve deterministic values and constraints at end point, for which we provide a systematic study and a suit of tools. Leveraging our framework, we present 1) a first theoretical error analysis for learning diffusion generation models, and 2) a simple and unified approach to learning on data from different discrete and constrained domains. Experiments show that our methods perform superbly on generating images, semantic segments and 3D point clouds.
Two-stage Hypothesis Tests for Variable Interactions with FDR Control
Duan, Jingyi, Ning, Yang, Chen, Xi, Chen, Yong
In many scenarios such as genome-wide association studies where dependences between variables commonly exist, it is often of interest to infer the interaction effects in the model. However, testing pairwise interactions among millions of variables in complex and high-dimensional data suffers from low statistical power and huge computational cost. To address these challenges, we propose a two-stage testing procedure with false discovery rate (FDR) control, which is known as a less conservative multiple-testing correction. Theoretically, the difficulty in the FDR control dues to the data dependence among test statistics in two stages, and the fact that the number of hypothesis tests conducted in the second stage depends on the screening result in the first stage. By using the Cram\'er type moderate deviation technique, we show that our procedure controls FDR at the desired level asymptotically in the generalized linear model (GLM), where the model is allowed to be misspecified. In addition, the asymptotic power of the FDR control procedure is rigorously established. We demonstrate via comprehensive simulation studies that our two-stage procedure is computationally more efficient than the classical BH procedure, with a comparable or improved statistical power. Finally, we apply the proposed method to a bladder cancer data from dbGaP where the scientific goal is to identify genetic susceptibility loci for bladder cancer.