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 Bayesian Inference


Metropolis-Hastings algorithm in joint-attention naming game: Experimental semiotics study

arXiv.org Artificial Intelligence

In this study, we explore the emergence of symbols during interactions between individuals through an experimental semiotic study. Previous studies investigate how humans organize symbol systems through communication using artificially designed subjective experiments. In this study, we have focused on a joint attention-naming game (JA-NG) in which participants independently categorize objects and assign names while assuming their joint attention. In the theory of the Metropolis-Hastings naming game (MHNG), listeners accept provided names according to the acceptance probability computed using the Metropolis-Hastings (MH) algorithm. The theory of MHNG suggests that symbols emerge as an approximate decentralized Bayesian inference of signs, which is represented as a shared prior variable if the conditions of MHNG are satisfied. This study examines whether human participants exhibit behavior consistent with MHNG theory when playing JA-NG. By comparing human acceptance decisions of a partner's naming with acceptance probabilities computed in the MHNG, we tested whether human behavior is consistent with the MHNG theory. The main contributions of this study are twofold. First, we reject the null hypothesis that humans make acceptance judgments with a constant probability, regardless of the acceptance probability calculated by the MH algorithm. This result suggests that people followed the acceptance probability computed by the MH algorithm to some extent. Second, the MH-based model predicted human acceptance/rejection behavior more accurately than the other four models: Constant, Numerator, Subtraction, and Binary. This result indicates that symbol emergence in JA-NG can be explained using MHNG and is considered an approximate decentralized Bayesian inference.


Recursive Metropolis-Hastings Naming Game: Symbol Emergence in a Multi-agent System based on Probabilistic Generative Models

arXiv.org Artificial Intelligence

In the studies on symbol emergence and emergent communication in a population of agents, a computational model was employed in which agents participate in various language games. Among these, the Metropolis-Hastings naming game (MHNG) possesses a notable mathematical property: symbol emergence through MHNG is proven to be a decentralized Bayesian inference of representations shared by the agents. However, the previously proposed MHNG is limited to a two-agent scenario. This paper extends MHNG to an N-agent scenario. The main contributions of this paper are twofold: (1) we propose the recursive Metropolis-Hastings naming game (RMHNG) as an N-agent version of MHNG and demonstrate that RMHNG is an approximate Bayesian inference method for the posterior distribution over a latent variable shared by agents, similar to MHNG; and (2) we empirically evaluate the performance of RMHNG on synthetic and real image data, enabling multiple agents to develop and share a symbol system. Furthermore, we introduce two types of approximations -- one-sample and limited-length -- to reduce computational complexity while maintaining the ability to explain communication in a population of agents. The experimental findings showcased the efficacy of RMHNG as a decentralized Bayesian inference for approximating the posterior distribution concerning latent variables, which are jointly shared among agents, akin to MHNG. Moreover, the utilization of RMHNG elucidated the agents' capacity to exchange symbols. Furthermore, the study discovered that even the computationally simplified version of RMHNG could enable symbols to emerge among the agents.


Neural Markov Jump Processes

arXiv.org Artificial Intelligence

Markov jump processes are continuous-time stochastic processes with a wide range of applications in both natural and social sciences. Despite their widespread use, inference in these models is highly non-trivial and typically proceeds via either Monte Carlo or expectation-maximization methods. In this work we introduce an alternative, variational inference algorithm for Markov jump processes which relies on neural ordinary differential equations, and is trainable via back-propagation. Our methodology learns neural, continuous-time representations of the observed data, that are used to approximate the initial distribution and time-dependent transition probability rates of the posterior Markov jump process. The time-independent rates of the prior process are in contrast trained akin to generative adversarial networks. We test our approach on synthetic data sampled from ground-truth Markov jump processes, experimental switching ion channel data and molecular dynamics simulations. Source code to reproduce our experiments is available online.


Active causal structure learning with advice

arXiv.org Artificial Intelligence

We introduce the problem of active causal structure learning with advice. In the typical well-studied setting, the learning algorithm is given the essential graph for the observational distribution and is asked to recover the underlying causal directed acyclic graph (DAG) $G^*$ while minimizing the number of interventions made. In our setting, we are additionally given side information about $G^*$ as advice, e.g. a DAG $G$ purported to be $G^*$. We ask whether the learning algorithm can benefit from the advice when it is close to being correct, while still having worst-case guarantees even when the advice is arbitrarily bad. Our work is in the same space as the growing body of research on algorithms with predictions. When the advice is a DAG $G$, we design an adaptive search algorithm to recover $G^*$ whose intervention cost is at most $O(\max\{1, \log \psi\})$ times the cost for verifying $G^*$; here, $\psi$ is a distance measure between $G$ and $G^*$ that is upper bounded by the number of variables $n$, and is exactly 0 when $G=G^*$. Our approximation factor matches the state-of-the-art for the advice-less setting.


Convolutional Bayesian Kernel Inference for 3D Semantic Mapping

arXiv.org Artificial Intelligence

Abstract-- Robotic perception is currently at a cross-roads between modern methods, which operate in an efficient latent space, and classical methods, which are mathematically founded and provide interpretable, trustworthy results. In this paper, we introduce a Convolutional Bayesian Kernel Inference (ConvBKI) layer which learns to perform explicit Bayesian inference within a depthwise separable convolution layer to maximize efficency while maintaining reliability simultaneously. We apply our layer to the task of real-time 3D semantic mapping, where we learn semantic-geometric probability distributions for Li-DAR sensor information and incorporate semantic predictions into a global map. The constructed semantic volumes are convolved with a depthwise filter to perform a real-time Bayesian update on a semantic 3D map. Robust world models are essential for safe and reliable the structured geometric representations of earlier, probabilistic autonomous robots.


Non-convex Bayesian Learning via Stochastic Gradient Markov Chain Monte Carlo

arXiv.org Artificial Intelligence

The rise of artificial intelligence (AI) hinges on the efficient training of modern deep neural networks (DNNs) for non-convex optimization and uncertainty quantification, which boils down to a non-convex Bayesian learning problem. A standard tool to handle the problem is Langevin Monte Carlo, which proposes to approximate the posterior distribution with theoretical guarantees. In this thesis, we start with the replica exchange Langevin Monte Carlo (also known as parallel tempering), which proposes appropriate swaps between exploration and exploitation to achieve accelerations. However, the na\"ive extension of swaps to big data problems leads to a large bias, and bias-corrected swaps are required. Such a mechanism leads to few effective swaps and insignificant accelerations. To alleviate this issue, we first propose a control variates method to reduce the variance of noisy energy estimators and show a potential to accelerate the exponential convergence. We also present the population-chain replica exchange based on non-reversibility and obtain an optimal round-trip rate for deep learning. In the second part of the thesis, we study scalable dynamic importance sampling algorithms based on stochastic approximation. Traditional dynamic importance sampling algorithms have achieved success, however, the lack of scalability has greatly limited their extensions to big data. To handle this scalability issue, we resolve the vanishing gradient problem and propose two dynamic importance sampling algorithms. Theoretically, we establish the stability condition for the underlying ordinary differential equation (ODE) system and guarantee the asymptotic convergence of the latent variable to the desired fixed point. Interestingly, such a result still holds given non-convex energy landscapes.


Parallelized Acquisition for Active Learning using Monte Carlo Sampling

arXiv.org Artificial Intelligence

Bayesian inference remains one of the most important tool-kits for any scientist, but increasingly expensive likelihood functions are required for ever-more complex experiments, raising the cost of generating a Monte Carlo sample of the posterior. Recent attention has been directed towards the use of emulators of the posterior based on Gaussian Process (GP) regression combined with active sampling to achieve comparable precision with far fewer costly likelihood evaluations. Key to this approach is the batched acquisition of proposals, so that the true posterior can be evaluated in parallel. This is usually achieved via sequential maximization of the highly multimodal acquisition function. Unfortunately, this approach parallelizes poorly and is prone to getting stuck in local maxima. Our approach addresses this issue by generating nearly-optimal batches of candidates using an almost-embarrassingly parallel Nested Sampler on the mean prediction of the GP. The resulting nearly-sorted Monte Carlo sample is used to generate a batch of candidates ranked according to their sequentially conditioned acquisition function values at little cost. The final sample can also be used for inferring marginal quantities. Our proposed implementation (NORA) demonstrates comparable accuracy to sequential conditioned acquisition optimization and efficient parallelization in various synthetic and cosmological inference problems.


Bayesian Complementary Kernelized Learning for Multidimensional Spatiotemporal Data

arXiv.org Artificial Intelligence

Probabilistic modeling of multidimensional spatiotemporal data is critical to many real-world applications. As real-world spatiotemporal data often exhibits complex dependencies that are nonstationary and nonseparable, developing effective and computationally efficient statistical models to accommodate nonstationary/nonseparable processes containing both long-range and short-scale variations becomes a challenging task, in particular for large-scale datasets with various corruption/missing structures. In this paper, we propose a new statistical framework -- Bayesian Complementary Kernelized Learning (BCKL) -- to achieve scalable probabilistic modeling for multidimensional spatiotemporal data. To effectively characterize complex dependencies, BCKL integrates two complementary approaches -- kernelized low-rank tensor factorization and short-range spatiotemporal Gaussian Processes. Specifically, we use a multi-linear low-rank factorization component to capture the global/long-range correlations in the data and introduce an additive short-scale GP based on compactly supported kernel functions to characterize the remaining local variabilities. We develop an efficient Markov chain Monte Carlo (MCMC) algorithm for model inference and evaluate the proposed BCKL framework on both synthetic and real-world spatiotemporal datasets. Our experiment results show that BCKL offers superior performance in providing accurate posterior mean and high-quality uncertainty estimates, confirming the importance of both global and local components in modeling spatiotemporal data.


Bayesian Decision Trees Inspired from Evolutionary Algorithms

arXiv.org Artificial Intelligence

Bayesian Decision Trees (DTs) are generally considered a more advanced and accurate model than a regular Decision Tree (DT) because they can handle complex and uncertain data. Existing work on Bayesian DTs uses Markov Chain Monte Carlo (MCMC) with an accept-reject mechanism and sample using naive proposals to proceed to the next iteration, which can be slow because of the burn-in time needed. We can reduce the burn-in period by proposing a more sophisticated way of sampling or by designing a different numerical Bayesian approach. In this paper, we propose a replacement of the MCMC with an inherently parallel algorithm, the Sequential Monte Carlo (SMC), and a more effective sampling strategy inspired by the Evolutionary Algorithms (EA). Experiments show that SMC combined with the EA can produce more accurate results compared to MCMC in 100 times fewer iterations.


PAC-Bayesian Soft Actor-Critic Learning

arXiv.org Artificial Intelligence

Actor-critic algorithms address the dual goals of reinforcement learning (RL), policy evaluation and improvement, via two separate function approximators. The practicality of this approach comes at the expense of training instability, caused mainly by the destructive effect of the approximation errors of the critic on the actor. We tackle this bottleneck by employing an existing Probably Approximately Correct (PAC) Bayesian bound for the first time as the critic training objective of the Soft Actor-Critic (SAC) algorithm. We further demonstrate that online learning performance improves significantly when a stochastic actor explores multiple futures by critic-guided random search. We observe our resulting algorithm to compare favorably to the state of the art on multiple classical control and locomotion tasks in terms of both sample efficiency and regret minimization.