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 Bayesian Inference


Federated Learning with Discriminative Naive Bayes Classifier

arXiv.org Artificial Intelligence

Federated Learning has emerged as a promising approach to train machine learning models on decentralized data sources while preserving data privacy. This paper proposes a new federated approach for Naive Bayes (NB) classification, assuming discrete variables. Our approach federates a discriminative variant of NB, sharing meaningless parameters instead of conditional probability tables. Therefore, this process is more reliable against possible attacks. We conduct extensive experiments on 12 datasets to validate the efficacy of our approach, comparing federated and non-federated settings. Additionally, we benchmark our method against the generative variant of NB, which serves as a baseline for comparison. Our experimental results demonstrate the effectiveness of our method in achieving accurate classification.


Query-Based and Unnoticeable Graph Injection Attack from Neighborhood Perspective

arXiv.org Artificial Intelligence

The robustness of Graph Neural Networks (GNNs) has become an increasingly important topic due to their expanding range of applications. Various attack methods have been proposed to explore the vulnerabilities of GNNs, ranging from Graph Modification Attacks (GMA) to the more practical and flexible Graph Injection Attacks (GIA). However, existing methods face two key challenges: (i) their reliance on surrogate models, which often leads to reduced attack effectiveness due to structural differences and prior biases, and (ii) existing GIA methods often sacrifice attack success rates in undefended settings to bypass certain defense models, thereby limiting their overall effectiveness. To overcome these limitations, we propose QUGIA, a Query-based and Unnoticeable Graph Injection Attack. QUGIA injects nodes by first selecting edges based on victim node connections and then generating node features using a Bayesian framework. This ensures that the injected nodes are similar to the original graph nodes, implicitly preserving homophily and making the attack more unnoticeable. Unlike previous methods, QUGIA does not rely on surrogate models, thereby avoiding performance degradation and achieving better generalization. Extensive experiments on six real-world datasets with diverse characteristics demonstrate that QUGIA achieves unnoticeable attacks and outperforms state-of-the-art attackers. The code will be released upon acceptance.


Estimating Network Models using Neural Networks

arXiv.org Machine Learning

Exponential random graph models (ERGMs) are very flexible for modeling network formation but pose difficult estimation challenges due to their intractable normalizing constant. Existing methods, such as MCMC-MLE, rely on sequential simulation at every optimization step. We propose a neural network approach that trains on a single, large set of parameter-simulation pairs to learn the mapping from parameters to average network statistics. Once trained, this map can be inverted, yielding a fast and parallelizable estimation method. The procedure also accommodates extra network statistics to mitigate model misspecification. Some simple illustrative examples show that the method performs well in practice.


What is causal about causal models and representations?

arXiv.org Machine Learning

Causal Bayesian networks are 'causal' models since they make predictions about interventional distributions. To connect such causal model predictions to real-world outcomes, we must determine which actions in the world correspond to which interventions in the model. For example, to interpret an action as an intervention on a treatment variable, the action will presumably have to a) change the distribution of treatment in a way that corresponds to the intervention, and b) not change other aspects, such as how the outcome depends on the treatment; while the marginal distributions of some variables may change as an effect. We introduce a formal framework to make such requirements for different interpretations of actions as interventions precise. We prove that the seemingly natural interpretation of actions as interventions is circular: Under this interpretation, every causal Bayesian network that correctly models the observational distribution is trivially also interventionally valid, and no action yields empirical data that could possibly falsify such a model. We prove an impossibility result: No interpretation exists that is non-circular and simultaneously satisfies a set of natural desiderata. Instead, we examine non-circular interpretations that may violate some desiderata and show how this may in turn enable the falsification of causal models. By rigorously examining how a causal Bayesian network could be a 'causal' model of the world instead of merely a mathematical object, our formal framework contributes to the conceptual foundations of causal representation learning, causal discovery, and causal abstraction, while also highlighting some limitations of existing approaches.


Efficient Prior Selection in Gaussian Process Bandits with Thompson Sampling

arXiv.org Machine Learning

Gaussian process (GP) bandits provide a powerful framework for solving blackbox optimization of unknown functions. The characteristics of the unknown function depends heavily on the assumed GP prior. Most work in the literature assume that this prior is known but in practice this seldom holds. Instead, practitioners often rely on maximum likelihood estimation to select the hyperparameters of the prior - which lacks theoretical guarantees. In this work, we propose two algorithms for joint prior selection and regret minimization in GP bandits based on GP Thompson sampling (GP-TS): Prior-Elimination GP-TS (PE-GP-TS) and HyperPrior GP-TS (HP-GP-TS). We theoretically analyze the algorithms and establish upper bounds for their respective regret. In addition, we demonstrate the effectiveness of our algorithms compared to the alternatives through experiments with synthetic and real-world data.


Enhancing Bayesian Network Structural Learning with Monte Carlo Tree Search

arXiv.org Artificial Intelligence

This article presents MCTS-BN, an adaptation of the Monte Carlo Tree Search (MCTS) algorithm for the structural learning of Bayesian Networks (BNs). Initially designed for game tree exploration, MCTS has been repurposed to address the challenge of learning BN structures by exploring the search space of potential ancestral orders in Bayesian Networks. Then, it employs Hill Climbing (HC) to derive a Bayesian Network structure from each order. In large BNs, where the search space for variable orders becomes vast, using completely random orders during the rollout phase is often unreliable and impractical. We adopt a semi-randomized approach to address this challenge by incorporating variable orders obtained from other heuristic search algorithms such as Greedy Equivalent Search (GES), PC, or HC itself. This hybrid strategy mitigates the computational burden and enhances the reliability of the rollout process. Experimental evaluations demonstrate the effectiveness of MCTS-BN in improving BNs generated by traditional structural learning algorithms, exhibiting robust performance even when base algorithm orders are suboptimal and surpassing the gold standard when provided with favorable orders.


Visual Theory of Mind Enables the Invention of Writing Systems

arXiv.org Artificial Intelligence

Abstract symbolic writing systems are semiotic codes that are ubiquitous in modern society but are otherwise absent in the animal kingdom. Anthropological evidence suggests that the earliest forms of some writing systems originally consisted of iconic pictographs, which signify their referent via visual resemblance. While previous studies have examined the emergence and, separately, the evolution of pictographic writing systems through a computational lens, most employ non-naturalistic methodologies that make it difficult to draw clear analogies to human and animal cognition. We develop a multi-agent reinforcement learning testbed for emergent communication called a Signification Game, and formulate a model of inferential communication that enables agents to leverage visual theory of mind to communicate actions using pictographs. Our model, which is situated within a broader formalism for animal communication, sheds light on the cognitive and cultural processes that led to the development of early writing systems.


Constrained belief updates explain geometric structures in transformer representations

arXiv.org Artificial Intelligence

What computational structures emerge in transformers trained on next-token prediction? In this work, we provide evidence that transformers implement constrained Bayesian belief updating -- a parallelized version of partial Bayesian inference shaped by architectural constraints. To do this, we integrate the model-agnostic theory of optimal prediction with mechanistic interpretability to analyze transformers trained on a tractable family of hidden Markov models that generate rich geometric patterns in neural activations. We find that attention heads carry out an algorithm with a natural interpretation in the probability simplex, and create representations with distinctive geometric structure. We show how both the algorithmic behavior and the underlying geometry of these representations can be theoretically predicted in detail -- including the attention pattern, OV-vectors, and embedding vectors -- by modifying the equations for optimal future token predictions to account for the architectural constraints of attention. Our approach provides a principled lens on how gradient descent resolves the tension between optimal prediction and architectural design.


Fundamental limits of learning in sequence multi-index models and deep attention networks: High-dimensional asymptotics and sharp thresholds

arXiv.org Artificial Intelligence

In this manuscript, we study the learning of deep attention neural networks, defined as the composition of multiple self-attention layers, with tied and low-rank weights. We first establish a mapping of such models to sequence multi-index models, a generalization of the widely studied multi-index model to sequential covariates, for which we establish a number of general results. In the context of Bayesian-optimal learning, in the limit of large dimension $D$ and commensurably large number of samples $N$, we derive a sharp asymptotic characterization of the optimal performance as well as the performance of the best-known polynomial-time algorithm for this setting --namely approximate message-passing--, and characterize sharp thresholds on the minimal sample complexity required for better-than-random prediction performance. Our analysis uncovers, in particular, how the different layers are learned sequentially. Finally, we discuss how this sequential learning can also be observed in a realistic setup.


Leveraging Joint Predictive Embedding and Bayesian Inference in Graph Self Supervised Learning

arXiv.org Artificial Intelligence

Graph representation learning has emerged as a cornerstone for tasks like node classification and link prediction, yet prevailing self-supervised learning (SSL) methods face challenges such as computational inefficiency, reliance on contrastive objectives, and representation collapse. Existing approaches often depend on feature reconstruction, negative sampling, or complex decoders, which introduce training overhead and hinder generalization. Further, current techniques which address such limitations fail to account for the contribution of node embeddings to a certain prediction in the absence of labeled nodes. To address these limitations, we propose a novel joint embedding predictive framework for graph SSL that eliminates contrastive objectives and negative sampling while preserving semantic and structural information. Additionally, we introduce a semantic-aware objective term that incorporates pseudo-labels derived from Gaussian Mixture Models (GMMs), enhancing node discriminability by evaluating latent feature contributions. Extensive experiments demonstrate that our framework outperforms state-of-the-art graph SSL methods across benchmarks, achieving superior performance without contrastive loss or complex decoders. Key innovations include (1) a non-contrastive, view-invariant joint embedding predictive architecture, (2) Leveraging single context and multiple targets relationship between subgraphs, and (3) GMM-based pseudo-label scoring to capture semantic contributions. This work advances graph SSL by offering a computationally efficient, collapse-resistant paradigm that bridges spatial and semantic graph features for downstream tasks. The code for our paper can be found at https://github.com/Deceptrax123/JPEB-GSSL