We present new algorithms for inference in credal networks --- directed acyclic graphs associated with sets of probabilities. Credal networks are here interpreted as encoding strong independence relations among variables. We first present a theory of credal networks based on separately specified sets of probabilities. We also show that inference with polytrees is NP-hard in this setting. We then introduce new techniques that reduce the computational effort demanded by inference, particularly in polytrees, by exploring separability of credal sets.

An increasing number of applications require real-time reasoning under uncertainty with streaming input. The temporal (dynamic) Bayes net formalism provides a powerful representational framework for such applications. However, existing exact inference algorithms for dynamic Bayes nets do not scale to the size of models required for real world applications which often contain hundreds or even thousands of variables for each time slice. In addition, existing algorithms were not developed with real-time processing in mind. We have developed a new computational approach to support real-time exact inference in large temporal Bayes nets. Our approach tackles scalability by recognizing that the complexity of the inference depends on the number of interface nodes between time slices and by exploiting the distinction between static and dynamic nodes in order to reduce the number of interface nodes and to factorize their joint probability distribution. We approach the real-time issue by organizing temporal Bayes nets into static representations, and then using the symbolic probabilistic inference algorithm to derive analytic expressions for the static representations. The parts of these expressions that do not change at each time step are pre-computed. The remaining parts are compiled into efficient procedural code so that the memory and CPU resources required by the inference are small and fixed.

Quantification is well known to be a major obstacle in the construction of a probabilistic network, especially when relying on human experts for this purpose. The construction of a qualitative probabilistic network has been proposed as an initial step in a network s quantification, since the qualitative network can be used TO gain preliminary insight IN the projected networks reasoning behaviour. We extend on this idea and present a new type of network in which both signs and numbers are specified; we further present an associated algorithm for probabilistic inference. Building upon these semi-qualitative networks, a probabilistic network can be quantified and studied in a stepwise manner. As a result, modelling inadequacies can be detected and amended at an early stage in the quantification process.

We present methods employed in Coordinate, a prototype service that supports collaboration and communication by learning predictive models that provide forecasts of users s AND availability.We describe how data IS collected about USER activity AND proximity FROM multiple devices, IN addition TO analysis OF the content OF users, the time of day, and day of week. We review applications of presence forecasting embedded in the Priorities application and then present details of the Coordinate service that was informed by the earlier efforts.

The Reverse Water Gas Shift system (RWGS) is a complex physical system designed to produce oxygen from the carbon dioxide atmosphere on Mars. If sent to Mars, it would operate without human supervision, thus requiring a reliable automated system for monitoring and control. The RWGS presents many challenges typical of real-world systems, including: noisy and biased sensors, nonlinear behavior, effects that are manifested over different time granularities, and unobservability of many important quantities. In this paper we model the RWGS using a hybrid (discrete/continuous) Dynamic Bayesian Network (DBN), where the state at each time slice contains 33 discrete and 184 continuous variables. We show how the system state can be tracked using probabilistic inference over the model. We discuss how to deal with the various challenges presented by the RWGS, providing a suite of techniques that are likely to be useful in a wide range of applications. In particular, we describe a general framework for dealing with nonlinear behavior using numerical integration techniques, extending the successful Unscented Filter. We also show how to use a fixed-point computation to deal with effects that develop at different time scales, specifically rapid changes occurring during slowly changing processes. We test our model using real data collected from the RWGS, demonstrating the feasibility of hybrid DBNs for monitoring complex real-world physical systems.

In this paper, we derive optimality results for greedy Bayesian-network search algorithms that perform single-edge modifications at each step and use asymptotically consistent scoring criteria. Our results extend those of Meek (1997) and Chickering (2002), who demonstrate that in the limit of large datasets, if the generative distribution is perfect with respect to a DAG defined over the observable variables, such search algorithms will identify this optimal (i.e. generative) DAG model. We relax their assumption about the generative distribution, and assume only that this distribution satisfies the {em composition property} over the observable variables, which is a more realistic assumption for real domains. Under this assumption, we guarantee that the search algorithms identify an {em inclusion-optimal} model; that is, a model that (1) contains the generative distribution and (2) has no sub-model that contains this distribution. In addition, we show that the composition property is guaranteed to hold whenever the dependence relationships in the generative distribution can be characterized by paths between singleton elements in some generative graphical model (e.g. a DAG, a chain graph, or a Markov network) even when the generative model includes unobserved variables, and even when the observed data is subject to selection bias.

Iterative Proportional Fitting (IPF), combined with EM, is commonly used as an algorithm for likelihood maximization in undirected graphical models. In this paper, we present two iterative algorithms that generalize upon IPF. The first one is for likelihood maximization in discrete chain factor graphs, which we define as a wide class of discrete variable models including undirected graphical models and Bayesian networks, but also chain graphs and sigmoid belief networks. The second one is for conditional likelihood maximization in standard undirected models and Bayesian networks. In both algorithms, the iteration steps are expressed in closed form. Numerical simulations show that the algorithms are competitive with state of the art methods.

In many supervised learning tasks, the entities to be labeled are related to each other in complex ways and their labels are not independent. For example, in hypertext classification, the labels of linked pages are highly correlated. A standard approach is to classify each entity independently, ignoring the correlations between them. Recently, Probabilistic Relational Models, a relational version of Bayesian networks, were used to define a joint probabilistic model for a collection of related entities. In this paper, we present an alternative framework that builds on (conditional) Markov networks and addresses two limitations of the previous approach. First, undirected models do not impose the acyclicity constraint that hinders representation of many important relational dependencies in directed models. Second, undirected models are well suited for discriminative training, where we optimize the conditional likelihood of the labels given the features, which generally improves classification accuracy. We show how to train these models effectively, and how to use approximate probabilistic inference over the learned model for collective classification of multiple related entities. We provide experimental results on a webpage classification task, showing that accuracy can be significantly improved by modeling relational dependencies.

We develop a closed form asymptotic formula to compute the marginal likelihood of data given a naive Bayesian network model with two hidden states and binary features. This formula deviates from the standard BIC score. Our work provides a concrete example that the BIC score is generally not valid for statistical models that belong to a stratified exponential family. This stands in contrast to linear and curved exponential families, where the BIC score has been proven to provide a correct approximation for the marginal likelihood.

In machine learning, Domain Adaptation (DA) arises when the distribution gen- erating the test (target) data differs from the one generating the learning (source) data. It is well known that DA is an hard task even under strong assumptions, among which the covariate-shift where the source and target distributions diverge only in their marginals, i.e. they have the same labeling function. Another popular approach is to consider an hypothesis class that moves closer the two distributions while implying a low-error for both tasks. This is a VC-dim approach that restricts the complexity of an hypothesis class in order to get good generalization. Instead, we propose a PAC-Bayesian approach that seeks for suitable weights to be given to each hypothesis in order to build a majority vote. We prove a new DA bound in the PAC-Bayesian context. This leads us to design the first DA-PAC-Bayesian algorithm based on the minimization of the proposed bound. Doing so, we seek for a \rho-weighted majority vote that takes into account a trade-off between three quantities. The first two quantities being, as usual in the PAC-Bayesian approach, (a) the complexity of the majority vote (measured by a Kullback-Leibler divergence) and (b) its empirical risk (measured by the \rho-average errors on the source sample). The third quantity is (c) the capacity of the majority vote to distinguish some structural difference between the source and target samples.