Bayesian Inference
Distributed Learning for Cooperative Inference
Nedić, Angelia, Olshevsky, Alex, Uribe, César A.
We study the problem of cooperative inference where a group of agents interact over a network and seek to estimate a joint parameter that best explains a set of observations. Agents do not know the network topology or the observations of other agents. We explore a variational interpretation of the Bayesian posterior density, and its relation to the stochastic mirror descent algorithm, to propose a new distributed learning algorithm. We show that, under appropriate assumptions, the beliefs generated by the proposed algorithm concentrate around the true parameter exponentially fast. We provide explicit non-asymptotic bounds for the convergence rate. Moreover, we develop explicit and computationally efficient algorithms for observation models belonging to exponential families.
Differentially Private Variational Inference for Non-conjugate Models
Jälkö, Joonas, Dikmen, Onur, Honkela, Antti
Many machine learning applications are based on data collected from people, such as their tastes and behaviour as well as biological traits and genetic data. Regardless of how important the application might be, one has to make sure individuals' identities or the privacy of the data are not compromised in the analysis. Differential privacy constitutes a powerful framework that prevents breaching of data subject privacy from the output of a computation. Differentially private versions of many important Bayesian inference methods have been proposed, but there is a lack of an efficient unified approach applicable to arbitrary models. In this contribution, we propose a differentially private variational inference method with a very wide applicability. It is built on top of doubly stochastic variational inference, a recent advance which provides a variational solution to a large class of models. We add differential privacy into doubly stochastic variational inference by clipping and perturbing the gradients. The algorithm is made more efficient through privacy amplification from subsampling. We demonstrate the method can reach an accuracy close to non-private level under reasonably strong privacy guarantees, clearly improving over previous sampling-based alternatives especially in the strong privacy regime.
Combining independent evidence using a Bayesian approach but without standard Bayesian updating?
I have made some progress with my work on combining independent evidence using a Bayesian approach but eschewing standard Bayesian updating. I found a neat analytical way of doing this, to a very good approximation, in cases where each estimate of a parameter corresponds to the ratio of two variables each determined with normal error, the fractional uncertainty in the numerator and denominator variables differing between the types of evidence. This seems a not uncommon situation in science, and it is a good approximation to that which exists when estimating climate sensitivity. I have had a manuscript in which I develop and test this method accepted by the Journal of Statistical Planning and Inference (for a special issue on Confidence Distributions edited by Tore Schweder and Nils Hjort). Frequentist coverage is almost exact using my analytical solution, based on combining Jeffreys' priors in quadrature, whereas Bayesian updating produces far poorer probability matching.
Parameter Inference -- Maximum Aposteriori – Towards Data Science – Medium
In the previous post, we discussed the motivation behind Maximum Likelihood Estimate and how to calculate it. We also learned a few tricks about calculating the log likelihood of a function by citing the application of monotonic functions, and how they make the entire process of estimating the critical points of a function much easier as they preserve those critical points. Put the #tails (0) and #heads (2) in the equation of theta_MLE, This result tells us that the probability of next flip being Tails is 0 (i.e., it predicts that no flip is ever gonna turn up Tails the coin is always going to show Heads), and it is glaringly obvious that this is not the case (barring the extreme case where the coin is heavily loaded). Now, this poses a big problem in the Parameter Estimation process because it does not give us the accurate probability of the next flip. We know that even a fair coin has a 25% chance of showing two Heads in a row (0.5 x 0.5 0.25).
Noisy Tensor Completion for Tensors with a Sparse Canonical Polyadic Factor
Jain, Swayambhoo, Gutierrez, Alexander, Haupt, Jarvis
In this paper we study the problem of noisy tensor completion for tensors that admit a canonical polyadic or CANDECOMP/PARAFAC (CP) decomposition with one of the factors being sparse. We present general theoretical error bounds for an estimate obtained by using a complexity-regularized maximum likelihood principle and then instantiate these bounds for the case of additive white Gaussian noise. We also provide an ADMM-type algorithm for solving the complexity-regularized maximum likelihood problem and validate the theoretical finding via experiments on synthetic data set.
Robust Causal Estimation in the Large-Sample Limit without Strict Faithfulness
Bucur, Ioan Gabriel, Claassen, Tom, Heskes, Tom
Causal effect estimation from observational data is an important and much studied research topic. The instrumental variable (IV) and local causal discovery (LCD) patterns are canonical examples of settings where a closed-form expression exists for the causal effect of one variable on another, given the presence of a third variable. Both rely on faithfulness to infer that the latter only influences the target effect via the cause variable. In reality, it is likely that this assumption only holds approximately and that there will be at least some form of weak interaction. This brings about the paradoxical situation that, in the large-sample limit, no predictions are made, as detecting the weak edge invalidates the setting. We introduce an alternative approach by replacing strict faithfulness with a prior that reflects the existence of many 'weak' (irrelevant) and 'strong' interactions. We obtain a posterior distribution over the target causal effect estimator which shows that, in many cases, we can still make good estimates. We demonstrate the approach in an application on a simple linear-Gaussian setting, using the MultiNest sampling algorithm, and compare it with established techniques to show our method is robust even when strict faithfulness is violated.
Probabilistic Search for Structured Data via Probabilistic Programming and Nonparametric Bayes
Saad, Feras, Casarsa, Leonardo, Mansinghka, Vikash
Databases are widespread, yet extracting relevant data can be difficult. Without substantial domain knowledge, multivariate search queries often return sparse or uninformative results. This paper introduces an approach for searching structured data based on probabilistic programming and nonparametric Bayes. Users specify queries in a probabilistic language that combines standard SQL database search operators with an information theoretic ranking function called predictive relevance. Predictive relevance can be calculated by a fast sparse matrix algorithm based on posterior samples from CrossCat, a nonparametric Bayesian model for high-dimensional, heterogeneously-typed data tables. The result is a flexible search technique that applies to a broad class of information retrieval problems, which we integrate into BayesDB, a probabilistic programming platform for probabilistic data analysis. This paper demonstrates applications to databases of US colleges, global macroeconomic indicators of public health, and classic cars. We found that human evaluators often prefer the results from probabilistic search to results from a standard baseline.
AMIDST: a Java Toolbox for Scalable Probabilistic Machine Learning
Masegosa, Andrés R., Martínez, Ana M., Ramos-López, Darío, Cabañas, Rafael, Salmerón, Antonio, Nielsen, Thomas D., Langseth, Helge, Madsen, Anders L.
The AMIDST Toolbox is a software for scalable probabilistic machine learning with a spe- cial focus on (massive) streaming data. The toolbox supports a flexible modeling language based on probabilistic graphical models with latent variables and temporal dependencies. The specified models can be learnt from large data sets using parallel or distributed implementa- tions of Bayesian learning algorithms for either streaming or batch data. These algorithms are based on a flexible variational message passing scheme, which supports discrete and continu- ous variables from a wide range of probability distributions. AMIDST also leverages existing functionality and algorithms by interfacing to software tools such as Flink, Spark, MOA, Weka, R and HUGIN. AMIDST is an open source toolbox written in Java and available at http://www.amidsttoolbox.com under the Apache Software License version 2.0.
Scalable Bayesian Rule Lists
Yang, Hongyu, Rudin, Cynthia, Seltzer, Margo
We present an algorithm for building probabilistic rule lists that is two orders of magnitude faster than previous work. Rule list algorithms are competitors for decision tree algorithms. They are associative classifiers, in that they are built from pre-mined association rules. They have a logical structure that is a sequence of IF-THEN rules, identical to a decision list or one-sided decision tree. Instead of using greedy splitting and pruning like decision tree algorithms, we fully optimize over rule lists, striking a practical balance between accuracy, interpretability, and computational speed. The algorithm presented here uses a mixture of theoretical bounds (tight enough to have practical implications as a screening or bounding procedure), computational reuse, and highly tuned language libraries to achieve computational efficiency. Currently, for many practical problems, this method achieves better accuracy and sparsity than decision trees; further, in many cases, the computational time is practical and often less than that of decision trees. The result is a probabilistic classifier (which estimates P(y = 1|x) for each x) that optimizes the posterior of a Bayesian hierarchical model over rule lists.
Distilling Information Reliability and Source Trustworthiness from Digital Traces
Tabibian, Behzad, Valera, Isabel, Farajtabar, Mehrdad, Song, Le, Schölkopf, Bernhard, Gomez-Rodriguez, Manuel
Online knowledge repositories typically rely on their users or dedicated editors to evaluate the reliability of their content. These evaluations can be viewed as noisy measurements of both information reliability and information source trustworthiness. Can we leverage these noisy evaluations, often biased, to distill a robust, unbiased and interpretable measure of both notions? In this paper, we argue that the temporal traces left by these noisy evaluations give cues on the reliability of the information and the trustworthiness of the sources. Then, we propose a temporal point process modeling framework that links these temporal traces to robust, unbiased and interpretable notions of information reliability and source trustworthiness. Furthermore, we develop an efficient convex optimization procedure to learn the parameters of the model from historical traces. Experiments on real-world data gathered from Wikipedia and Stack Overflow show that our modeling framework accurately predicts evaluation events, provides an interpretable measure of information reliability and source trustworthiness, and yields interesting insights about real-world events.