Goto

Collaborating Authors

 Bayesian Inference


A statistical model for aggregating judgments by incorporating peer predictions

arXiv.org Machine Learning

It is a truism that the knowledge of groups of people, particularly experts, outperforms that of individuals [43] and there is increasing call to use the dispersed judgments of the crowd in policy making [42]. There is a large literature spanning multiple disciplines on methods for aggregating beliefs (for reviews see [9, 6, 7]), and previous applications have included political and economic forecasting [3, 27], evaluating nuclear safety [10] and public policy [28], and assessing the quality of chemical probes [31]. However, previous approaches to aggregating beliefs have implicitly assumed'kind' (as opposed to'wicked') environments [16]. In a previous paper, [35] we proposed an algorithm for aggregating beliefs using not only respondent's answers but also their prediction of the answer distribution, and proved that for an infinite number of non-noisy Bayesian respondents, it would always determine the correct answer if sufficient evidence was available in the world. 1 Here, we build on this approach but treat the aggregation problem as one of statistical inference. We propose a model of how people formulate their own judgments and predict the distribution of the judgments of others, and use this model to infer the most probable world state giving rise to the observed data from people. The model can be applied at the level of a single question but also across multiple questions, to infer the domain expertise of respondents. The model is thus broader in scope than other machine learning models for aggregation in that it accepts unique questions, but can also be compared to their performance across multiple questions. We do not assume that the aggregation model has access to correct answers or to historical data about the performance of respondents on similar questions. By using a simple model of how people make such judgments, we are able to increase the accuracy of the group's aggregate answer in domains ranging from estimating art prices to diagnosing skin lesions.


An Empirical-Bayes Score for Discrete Bayesian Networks

arXiv.org Machine Learning

Bayesian network structure learning is often performed in a Bayesian setting, by evaluating candidate structures using their posterior probabilities for a given data set. Score-based algorithms then use those posterior probabilities as an objective function and return the maximum a posteriori network as the learned model. For discrete Bayesian networks, the canonical choice for a posterior score is the Bayesian Dirichlet equivalent uniform (BDeu) marginal likelihood with a uniform (U) graph prior (Heckerman et al., 1995). Its favourable theoretical properties descend from assuming a uniform prior both on the space of the network structures and on the space of the parameters of the network. In this paper, we revisit the limitations of these assumptions; and we introduce an alternative set of assumptions and the resulting score: the Bayesian Dirichlet sparse (BDs) empirical Bayes marginal likelihood with a marginal uniform (MU) graph prior. We evaluate its performance in an extensive simulation study, showing that MU+BDs is more accurate than U+BDeu both in learning the structure of the network and in predicting new observations, while not being computationally more complex to estimate.


Analysis of Perishable Products Sales Using Bayesian Inference

@machinelearnbot

It is very important to make sales forecasting in the supply chain management. In our previous post, we considered different approaches for time series forecasting. The most important thing is to make a decision how many products should be supplied into each store. If we can predict future sales precisely, the amount of products we need to supply is equal to our precise prediction. But in the real life we cannot make precise prediction, we rather can predict product consumption value with some confidential interval.


High SNR Consistent Compressive Sensing

arXiv.org Machine Learning

High signal to noise ratio (SNR) consistency of model selection criteria in linear regression models has attracted a lot of attention recently. However, most of the existing literature on high SNR consistency deals with model order selection. Further, the limited literature available on the high SNR consistency of subset selection procedures (SSPs) is applicable to linear regression with full rank measurement matrices only. Hence, the performance of SSPs used in underdetermined linear models (a.k.a compressive sensing (CS) algorithms) at high SNR is largely unknown. This paper fills this gap by deriving necessary and sufficient conditions for the high SNR consistency of popular CS algorithms like $l_0$-minimization, basis pursuit de-noising or LASSO, orthogonal matching pursuit and Dantzig selector. Necessary conditions analytically establish the high SNR inconsistency of CS algorithms when used with the tuning parameters discussed in literature. Novel tuning parameters with SNR adaptations are developed using the sufficient conditions and the choice of SNR adaptations are discussed analytically using convergence rate analysis. CS algorithms with the proposed tuning parameters are numerically shown to be high SNR consistent and outperform existing tuning parameters in the moderate to high SNR regime.


Reparameterization Gradients through Acceptance-Rejection Sampling Algorithms

arXiv.org Machine Learning

Variational inference using the reparameterization trick has enabled large-scale approximate Bayesian inference in complex probabilistic models, leveraging stochastic optimization to sidestep intractable expectations. The reparameterization trick is applicable when we can simulate a random variable by applying a differentiable deterministic function on an auxiliary random variable whose distribution is fixed. For many distributions of interest (such as the gamma or Dirichlet), simulation of random variables relies on acceptance-rejection sampling. The discontinuity introduced by the accept-reject step means that standard reparameterization tricks are not applicable. We propose a new method that lets us leverage reparameterization gradients even when variables are outputs of a acceptance-rejection sampling algorithm. Our approach enables reparameterization on a larger class of variational distributions. In several studies of real and synthetic data, we show that the variance of the estimator of the gradient is significantly lower than other state-of-the-art methods. This leads to faster convergence of stochastic gradient variational inference.


The best kept secret about linear and logistic regression

@machinelearnbot

All the regression theory developed by statisticians over the last 200 years (related to the general linear model) is useless. Regression can be performed as accurately without statistical models, including the computation of confidence intervals (for estimates, predicted values or regression parameters). The non-statistical approach is also more robust than theory described in all statistics textbooks and taught in all statistical courses. It does not require Map-Reduce when data is really big, nor any matrix inversion, maximum likelihood estimation, or mathematical optimization (Newton algorithm). It is indeed incredibly simple, robust, easy to interpret, and easy to code (no statistical libraries required).


Parallel Implementation of Efficient Search Schemes for the Inference of Cancer Progression Models

arXiv.org Machine Learning

The emergence and development of cancer is a consequence of the accumulation over time of genomic mutations involving a specific set of genes, which provides the cancer clones with a functional selective advantage. In this work, we model the order of accumulation of such mutations during the progression, which eventually leads to the disease, by means of probabilistic graphic models, i.e., Bayesian Networks (BNs). We investigate how to perform the task of learning the structure of such BNs, according to experimental evidence, adopting a global optimization meta-heuristics. In particular, in this work we rely on Genetic Algorithms, and to strongly reduce the execution time of the inference -- which can also involve multiple repetitions to collect statistically significant assessments of the data -- we distribute the calculations using both multi-threading and a multi-node architecture. The results show that our approach is characterized by good accuracy and specificity; we also demonstrate its feasibility, thanks to a 84x reduction of the overall execution time with respect to a traditional sequential implementation.


Dropout Inference in Bayesian Neural Networks with Alpha-divergences

arXiv.org Machine Learning

To obtain uncertainty estimates with real-world Bayesian deep learning models, practical inference approximations are needed. Dropout variational inference (VI) for example has been used for machine vision and medical applications, but VI can severely underestimates model uncertainty. Alpha-divergences are alternative divergences to VI's KL objective, which are able to avoid VI's uncertainty underestimation. But these are hard to use in practice: existing techniques can only use Gaussian approximating distributions, and require existing models to be changed radically, thus are of limited use for practitioners. We propose a re-parametrisation of the alpha-divergence objectives, deriving a simple inference technique which, together with dropout, can be easily implemented with existing models by simply changing the loss of the model. We demonstrate improved uncertainty estimates and accuracy compared to VI in dropout networks. We study our model's epistemic uncertainty far away from the data using adversarial images, showing that these can be distinguished from non-adversarial images by examining our model's uncertainty.


Exact Dimensionality Selection for Bayesian PCA

arXiv.org Machine Learning

We present a Bayesian model selection approach to estimate the intrinsic dimensionality of a high-dimensional dataset. To this end, we introduce a novel formulation of the probabilisitic principal component analysis model based on a normal-gamma prior distribution. In this context, we exhibit a closed-form expression of the marginal likelihood which allows to infer an optimal number of components. We also propose a heuristic based on the expected shape of the marginal likelihood curve in order to choose the hyperparameters. In non-asymptotic frameworks, we show on simulated data that this exact dimensionality selection approach is competitive with both Bayesian and frequentist state-of-the-art methods.


A Statistical Learning Approach to Modal Regression

arXiv.org Machine Learning

This paper studies the nonparametric modal regression problem systematically from a statistical learning view. Originally motivated by pursuing a theoretical understanding of the maximum correntropy criterion based regression (MCCR), our study reveals that MCCR with a tending-to-zero scale parameter is essentially modal regression. We show that nonparametric modal regression problem can be approached via the classical empirical risk minimization. Some efforts are then made to develop a framework for analyzing and implementing modal regression. For instance, the modal regression function is described, the modal regression risk is defined explicitly and its \textit{Bayes} rule is characterized; for the sake of computational tractability, the surrogate modal regression risk, which is termed as the generalization risk in our study, is introduced. On the theoretical side, the excess modal regression risk, the excess generalization risk, the function estimation error, and the relations among the above three quantities are studied rigorously. It turns out that under mild conditions, function estimation consistency and convergence may be pursued in modal regression as in vanilla regression protocols, such as mean regression, median regression, and quantile regression. However, it outperforms these regression models in terms of robustness as shown in our study from a re-descending M-estimation view. This coincides with and in return explains the merits of MCCR on robustness. On the practical side, the implementation issues of modal regression including the computational algorithm and the tuning parameters selection are discussed. Numerical assessments on modal regression are also conducted to verify our findings empirically.