Bayesian Inference
Overcoming Catastrophic Forgetting by Incremental Moment Matching
Lee, Sang-Woo, Kim, Jin-Hwa, Jun, Jaehyun, Ha, Jung-Woo, Zhang, Byoung-Tak
Catastrophic forgetting is a problem of neural networks that loses the information of the first task after training the second task. Here, we propose a method, i.e. incremental moment matching (IMM), to resolve this problem. IMM incrementally matches the moment of the posterior distribution of the neural network which is trained on the first and the second task, respectively. To make the search space of posterior parameter smooth, the IMM procedure is complemented by various transfer learning techniques including weight transfer, L2-norm of the old and the new parameter, and a variant of dropout with the old parameter. We analyze our approach on a variety of datasets including the MNIST, CIFAR-10, Caltech-UCSD-Birds, and Lifelog datasets. The experimental results show that IMM achieves state-of-the-art performance by balancing the information between an old and a new network.
A Minimax Optimal Algorithm for Crowdsourcing
Bonald, Thomas, Combes, Richard
We consider the problem of accurately estimating the reliability of workers based on noisy labels they provide, which is a fundamental question in crowdsourcing. We propose a novel lower bound on the minimax estimation error which applies to any estimation procedure. We further propose Triangular Estimation (TE), an algorithm for estimating the reliability of workers. TE has low complexity, may be implemented in a streaming setting when labels are provided by workers in real time, and does not rely on an iterative procedure. We prove that TE is minimax optimal and matches our lower bound. We conclude by assessing the performance of TE and other state-of-the-art algorithms on both synthetic and real-world data.
Scalable Levy Process Priors for Spectral Kernel Learning
Jang, Phillip A., Loeb, Andrew, Davidow, Matthew, Wilson, Andrew G.
Gaussian processes are rich distributions over functions, with generalization properties determined by a kernel function. When used for long-range extrapolation, predictions are particularly sensitive to the choice of kernel parameters. It is therefore critical to account for kernel uncertainty in our predictive distributions. We propose a distribution over kernels formed by modelling a spectral mixture density with a Levy process. The resulting distribution has support for all stationary covariances---including the popular RBF, periodic, and Matern kernels---combined with inductive biases which enable automatic and data efficient learning, long-range extrapolation, and state of the art predictive performance. The proposed model also presents an approach to spectral regularization, as the Levy process introduces a sparsity-inducing prior over mixture components, allowing automatic selection over model order and pruning of extraneous components. We exploit the algebraic structure of the proposed process for O(n) training and O(1) predictions. We perform extrapolations having reasonable uncertainty estimates on several benchmarks, show that the proposed model can recover flexible ground truth covariances and that it is robust to errors in initialization.
Collapsed variational Bayes for Markov jump processes
Zhang, Boqian, Pan, Jiangwei, Rao, Vinayak A.
Markov jump processes are continuous-time stochastic processes widely used in statistical applications in the natural sciences, and more recently in machine learning. Inference for these models typically proceeds via Markov chain Monte Carlo, and can suffer from various computational challenges. In this work, we propose a novel collapsed variational inference algorithm to address this issue. Our work leverages ideas from discrete-time Markov chains, and exploits a connection between these two through an idea called uniformization. Our algorithm proceeds by marginalizing out the parameters of the Markov jump process, and then approximating the distribution over the trajectory with a factored distribution over segments of a piecewise-constant function. Unlike MCMC schemes that marginalize out transition times of a piecewise-constant process, our scheme optimizes the discretization of time, resulting in significant computational savings. We apply our ideas to synthetic data as well as a dataset of check-in recordings, where we demonstrate superior performance over state-of-the-art MCMC methods.
PASS-GLM: polynomial approximate sufficient statistics for scalable Bayesian GLM inference
Huggins, Jonathan, Adams, Ryan P., Broderick, Tamara
Generalized linear models (GLMs)---such as logistic regression, Poisson regression, and robust regression---provide interpretable models for diverse data types. Probabilistic approaches, particularly Bayesian ones, allow coherent estimates of uncertainty, incorporation of prior information, and sharing of power across experiments via hierarchical models. In practice, however, the approximate Bayesian methods necessary for inference have either failed to scale to large data sets or failed to provide theoretical guarantees on the quality of inference. We propose a new approach based on constructing polynomial approximate sufficient statistics for GLMs (PASS-GLM). We demonstrate that our method admits a simple algorithm as well as trivial streaming and distributed extensions that do not compound error across computations. We provide theoretical guarantees on the quality of point (MAP) estimates, the approximate posterior, and posterior mean and uncertainty estimates. We validate our approach empirically in the case of logistic regression using a quadratic approximation and show competitive performance with stochastic gradient descent, MCMC, and the Laplace approximation in terms of speed and multiple measures of accuracy---including on an advertising data set with 40 million data points and 20,000 covariates.
Model-based Bayesian inference of neural activity and connectivity from all-optical interrogation of a neural circuit
Aitchison, Laurence, Russell, Lloyd, Packer, Adam M., Yan, Jinyao, Castonguay, Philippe, Hausser, Michael, Turaga, Srinivas C.
Population activity measurement by calcium imaging can be combined with cellular resolution optogenetic activity perturbations to enable the mapping of neural connectivity in vivo. This requires accurate inference of perturbed and unperturbed neural activity from calcium imaging measurements, which are noisy and indirect, and can also be contaminated by photostimulation artifacts. We have developed a new fully Bayesian approach to jointly inferring spiking activity and neural connectivity from in vivo all-optical perturbation experiments. In contrast to standard approaches that perform spike inference and analysis in two separate maximum-likelihood phases, our joint model is able to propagate uncertainty in spike inference to the inference of connectivity and vice versa. We use the framework of variational autoencoders to model spiking activity using discrete latent variables, low-dimensional latent common input, and sparse spike-and-slab generalized linear coupling between neurons. Additionally, we model two properties of the optogenetic perturbation: off-target photostimulation and photostimulation transients. Using this model, we were able to fit models on 30 minutes of data in just 10 minutes. We performed an all-optical circuit mapping experiment in primary visual cortex of the awake mouse, and use our approach to predict neural connectivity between excitatory neurons in layer 2/3. Predicted connectivity is sparse and consistent with known correlations with stimulus tuning, spontaneous correlation and distance.
Tomography of the London Underground: a Scalable Model for Origin-Destination Data
Colombo, Nicolรฒ, Silva, Ricardo, Kang, Soong Moon
The paper addresses the classical network tomography problem of inferring local traffic given origin-destination observations. Focusing on large complex public transportation systems, we build a scalable model that exploits input-output information toestimate the unobserved link/station loads and the users' path preferences. Based on the reconstruction of the users' travel time distribution, the model is flexible enough to capture possible different path-choice strategies and correlations between users travelling on similar paths at similar times. The corresponding likelihood function is intractable for medium or large-scale networks and we propose twodistinct strategies, namely the exact maximum-likelihood inference of an approximate but tractable model and the variational inference of the original intractable model. As an application of our approach, we consider the emblematic case of the London underground network, where a tap-in/tap-out system tracks the starting/exit time and location of all journeys in a day. A set of synthetic simulations and real data provided by Transport For London are used to validate and test the model on the predictions of observable and unobservable quantities.
Cold-Start Reinforcement Learning with Softmax Policy Gradient
Policy-gradient approaches to reinforcement learning have two common and undesirable overhead procedures, namely warm-start training and sample variance reduction. In this paper, we describe a reinforcement learning method based on a softmax value function that requires neither of these procedures. Our method combines the advantages of policy-gradient methods with the efficiency and simplicity of maximum-likelihood approaches. We apply this new cold-start reinforcement learning method in training sequence generation models for structured output prediction problems. Empirical evidence validates this method on automatic summarization and image captioning tasks.
An Empirical Bayes Approach to Optimizing Machine Learning Algorithms
There is rapidly growing interest in using Bayesian optimization to tune model and inference hyperparameters for machine learning algorithms that take a long time to run. For example, Spearmint is a popular software package for selecting the optimal number of layers and learning rate in neural networks. But given that there is uncertainty about which hyperparameters give the best predictive performance, and given that fitting a model for each choice of hyperparameters is costly, it is arguably wasteful to "throw away" all but the best result, as per Bayesian optimization. A related issue is the danger of overfitting the validation data when optimizing many hyperparameters. In this paper, we consider an alternative approach that uses more samples from the hyperparameter selection procedure to average over the uncertainty in model hyperparameters. The resulting approach, empirical Bayes for hyperparameter averaging (EB-Hyp) predicts held-out data better than Bayesian optimization in two experiments on latent Dirichlet allocation and deep latent Gaussian models. EB-Hyp suggests a simpler approach to evaluating and deploying machine learning algorithms that does not require a separate validation data set and hyperparameter selection procedure.
Parallel Streaming Wasserstein Barycenters
Staib, Matthew, Claici, Sebastian, Solomon, Justin M., Jegelka, Stefanie
Efficiently aggregating data from different sources is a challenging problem, particularly when samples from each source are distributed differently. These differences can be inherent to the inference task or present for other reasons: sensors in a sensor network may be placed far apart, affecting their individual measurements. Conversely, it is computationally advantageous to split Bayesian inference tasks across subsets of data, but data need not be identically distributed across subsets. One principled way to fuse probability distributions is via the lens of optimal transport: the Wasserstein barycenter is a single distribution that summarizes a collection of input measures while respecting their geometry. However, computing the barycenter scales poorly and requires discretization of all input distributions and the barycenter itself. Improving on this situation, we present a scalable, communication-efficient, parallel algorithm for computing the Wasserstein barycenter of arbitrary distributions. Our algorithm can operate directly on continuous input distributions and is optimized for streaming data. Our method is even robust to nonstationary input distributions and produces a barycenter estimate that tracks the input measures over time. The algorithm is semi-discrete, needing to discretize only the barycenter estimate. To the best of our knowledge, we also provide the first bounds on the quality of the approximate barycenter as the discretization becomes finer. Finally, we demonstrate the practical effectiveness of our method, both in tracking moving distributions on a sphere, as well as in a large-scale Bayesian inference task.