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 Bayesian Inference


Embarrassingly parallel MCMC using deep invertible transformations

arXiv.org Machine Learning

While MCMC methods have become a main work-horse for Bayesian inference, scaling them to large distributed datasets is still a challenge. Embarrassingly parallel MCMC strategies take a divide-and-conquer stance to achieve this by writing the target posterior as a product of subposteriors, running MCMC for each of them in parallel and subsequently combining the results. The challenge then lies in devising efficient aggregation strategies. Current strategies trade-off between approximation quality, and costs of communication and computation. In this work, we introduce a novel method that addresses these issues simultaneously. Our key insight is to introduce a deep invertible transformation to approximate each of the subposteriors. These approximations can be made accurate even for complex distributions and serve as intermediate representations, keeping the total communication cost limited. Moreover, they enable us to sample from the product of the subposteriors using an efficient and stable importance sampling scheme. We demonstrate the approach outperforms available state-of-the-art methods in a range of challenging scenarios, including high-dimensional and heterogeneous subposteriors.


Revisiting clustering as matrix factorisation on the Stiefel manifold

arXiv.org Machine Learning

Our approach leverages the well known Burer-Monteiro factorisation strategy from large scale optimisation, in the context of low rank estimation. Moreover, our Burer-Monteiro factors are shown to lie on a Stiefel manifold. We propose a new generalized Bayesian estimator for this problem and prove novel prediction bounds for clustering. We also devise a componentwise Langevin sampler on the Stiefel manifold to compute this estimator.


Likelihood-free MCMC with Approximate Likelihood Ratios

arXiv.org Machine Learning

We propose a novel approach for posterior sampling with intractable likelihoods. This is an increasingly important problem in scientific applications where models are implemented as sophisticated computer simulations. As a result, tractable densities are not available, which forces practitioners to rely on approximations during inference. We address the intractability of densities by training a parameterized classifier whose output is used to approximate likelihood ratios between arbitrary model parameters. In turn, we are able to draw posterior samples by plugging this approximator into common Markov chain Monte Carlo samplers such as Metropolis-Hastings and Hamiltonian Monte Carlo. We demonstrate the proposed technique by fitting the generating parameters of implicit models, ranging from a linear probabilistic model to settings in high energy physics with high-dimensional observations. Finally, we discuss several diagnostics to assess the quality of the posterior.


Rectangular Bounding Process

arXiv.org Artificial Intelligence

Stochastic partition models divide a multi-dimensional space into a number of rectangular regions, such that the data within each region exhibit certain types of homogeneity. Due to the nature of their partition strategy, existing partition models may create many unnecessary divisions in sparse regions when trying to describe data in dense regions. To avoid this problem we introduce a new parsimonious partition model -- the Rectangular Bounding Process (RBP) -- to efficiently partition multi-dimensional spaces, by employing a bounding strategy to enclose data points within rectangular bounding boxes. Unlike existing approaches, the RBP possesses several attractive theoretical properties that make it a powerful nonparametric partition prior on a hypercube. In particular, the RBP is self-consistent and as such can be directly extended from a finite hypercube to infinite (unbounded) space. We apply the RBP to regression trees and relational models as a flexible partition prior. The experimental results validate the merit of the RBP {in rich yet parsimonious expressiveness} compared to the state-of-the-art methods.


An Introduction to Bayesian Reasoning

#artificialintelligence

The coefficients are constrained by the prior and end up smaller in the second example. Although the model is not fit here with Bayesian techniques, it has a Bayesian interpretation. The output here does not quite give a distribution over the coefficient (though other packages can), but does give something related: a 95% confidence interval around the coefficient, in addition to its point estimate. By now you may have a taste for Bayesian techniques and what they can do for you, from a few simple examples. Things get more interesting, however, when we see what priors and posteriors can do for a real-world use case. For part 2, please click here.


Learning Quantum Graphical Models using Constrained Gradient Descent on the Stiefel Manifold

arXiv.org Machine Learning

Quantum graphical models (QGMs) extend the classical framework for reasoning about uncertainty by incorporating the quantum mechanical view of probability. Prior work on QGMs has focused on hidden quantum Markov models (HQMMs), which can be formulated using quantum analogues of the sum rule and Bayes rule used in classical graphical models. Despite the focus on developing the QGM framework, there has been little progress in learning these models from data. The existing state-of-the-art approach randomly initializes parameters and iteratively finds unitary transformations that increase the likelihood of the data. While this algorithm demonstrated theoretical strengths of HQMMs over HMMs, it is slow and can only handle a small number of hidden states. In this paper, we tackle the learning problem by solving a constrained optimization problem on the Stiefel manifold using a well-known retraction-based algorithm. We demonstrate that this approach is not only faster and yields better solutions on several datasets, but also scales to larger models that were prohibitively slow to train via the earlier method.


NeuTra-lizing Bad Geometry in Hamiltonian Monte Carlo Using Neural Transport

arXiv.org Machine Learning

Hamiltonian Monte Carlo is a powerful algorithm for sampling from difficult-to-normalize posterior distributions. However, when the geometry of the posterior is unfavorable, it may take many expensive evaluations of the target distribution and its gradient to converge and mix. We propose neural transport (NeuTra) HMC, a technique for learning to correct this sort of unfavorable geometry using inverse autoregressive flows (IAF), a powerful neural variational inference technique. The IAF is trained to minimize the KL divergence from an isotropic Gaussian to the warped posterior, and then HMC sampling is performed in the warped space. We evaluate NeuTra HMC on a variety of synthetic and real problems, and find that it significantly outperforms vanilla HMC both in time to reach the stationary distribution and asymptotic effective-sample-size rates.


Bayes' Theorem: The Holy Grail of Data Science – Towards Data Science

#artificialintelligence

Bayes' theorem, named after 18th-century British mathematician Thomas Bayes, is a mathematical formula for determining conditional probabilities. This theorem has enormous importance in the field of data science. For example one of many applications of Bayes' theorem is the Bayesian inference, a particular approach to statistical inference. Bayesian inference is a method in which Bayes' theorem is used to update the probability for a hypothesis as more evidence or information becomes available. Bayesian inference has found application in a wide range of activities, including science, engineering, philosophy, medicine, sport, and law.


What is Bayes Theorem? - Machine Learning Interview Questions - DataMites

#artificialintelligence

Bayes theorem in basis for many machine learning algorithm, P(c/x) P(x/c)*P(c)/P(x) Popularly used #Naive #Bayes Machine Learning algorithm is used for Text classification. One of the common question is "What is Bayes Theorem?" watch this video to understand this question and how to explain in the interview. If you are looking for Course Details please visit: https://datamites.com/ You can learn business statistics, tableau, deep learning, data mining etc,..


Probabilistic Modeling for Novelty Detection with Applications to Fraud Identification

arXiv.org Machine Learning

Novelty detection is the unsupervised problem of identifying anomalies in test data which significantly differ from the training set. Novelty detection is one of the classic challenges in Machine Learning and a core component of several research areas such as fraud detection, intrusion detection, medical diagnosis, data cleaning, and fault prevention. While numerous algorithms were designed to address this problem, most methods are only suitable to model continuous numerical data. Tackling datasets composed of mixed-type features, such as numerical and categorical data, or temporal datasets describing discrete event sequences is a challenging task. In addition to the supported data types, the key criteria for efficient novelty detection methods are the ability to accurately dissociate novelties from nominal samples, the interpretability, the scalability and the robustness to anomalies located in the training data. In this thesis, we investigate novel ways to tackle these issues. In particular, we propose (i) an experimental comparison of novelty detection methods for mixed-type data (ii) an experimental comparison of novelty detection methods for sequence data, (iii) a probabilistic nonparametric novelty detection method for mixed-type data based on Dirichlet process mixtures and exponential-family distributions and (iv) an autoencoder-based novelty detection model with encoder/decoder modelled as deep Gaussian processes.