Bayesian Inference
The Binary Space Partitioning-Tree Process
Fan, Xuhui, Li, Bin, Sisson, Scott Anthony
The Mondrian process represents an elegant and powerful approach for space partition modelling. However, as it restricts the partitions to be axis-aligned, its modelling flexibility is limited. In this work, we propose a self-consistent Binary Space Partitioning (BSP)-Tree process to generalize the Mondrian process. The BSP-Tree process is an almost surely right continuous Markov jump process that allows uniformly distributed oblique cuts in a two-dimensional convex polygon. The BSP-Tree process can also be extended using a non-uniform probability measure to generate direction differentiated cuts. The process is also self-consistent, maintaining distributional invariance under a restricted subdomain. We use Conditional-Sequential Monte Carlo for inference using the tree structure as the high-dimensional variable. The BSP-Tree process's performance on synthetic data partitioning and relational modelling demonstrates clear inferential improvements over the standard Mondrian process and other related methods.
TATi-Thermodynamic Analytics ToolkIt: TensorFlow-based software for posterior sampling in machine learning applications
Heber, Frederik, Trstanova, Zofia, Leimkuhler, Benedict
The fundamental role of neural networks (NNs) is readily apparent from their widespread use in machine learning in applications such as natural language processing [72], social network analysis [26], medical diagnosis [6, 35], vision systems [66], and robotic path planning [44]. The greatest success of these models lies in their flexibility, their ability to represent complex, nonlinear relationships in high-dimensional data sets, and the availability of frameworks that allow NNs to be implemented on rapidly evolving GPU platforms [40, 29]. The industrial appetite for deep learning has led to very rapid expansion of the subject in recent years, although, as pointed out by Dunson [19], at times the mathematical and theoretical understanding of these methods has been swept aside in the rush to advance the methodology. The potential impact on society of machine learning algorithms demands that their exposition and use be subject to the highest standards of clarity, ease of interpretation, and uncertainty quantification. Typical NN training seeks to optimize the parameters of the network (biases and weights) under the constraint that the training data set is well approximated [28, 23].
Combining Model and Parameter Uncertainty in Bayesian Neural Networks
Hubin, Aliaksandr, Storvik, Geir
Bayesian neural networks (BNNs) have recently regained a significant amount of attention in the deep learning community due to the development of scalable approximate Bayesian inference techniques. There are several advantages of using Bayesian approach: Parameter and prediction uncertainty become easily available, facilitating rigid statistical analysis. Furthermore, prior knowledge can be incorporated. However so far there have been no scalable techniques capable of combining both model (structural) and parameter uncertainty. In this paper we introduce the concept of model uncertainty in BNNs and hence make inference in the joint space of models and parameters. Moreover, we suggest an adaptation of a scalable variational inference approach with reparametrization of marginal inclusion probabilities to incorporate the model space constraints. Finally, we show that incorporating model uncertainty via Bayesian model averaging and Bayesian model selection allows to drastically sparsify the structure of BNNs without significant loss of predictive power.
High-Dimensional Bernoulli Autoregressive Process with Long-Range Dependence
Pandit, Parthe, Sahraee-Ardakan, Mojtaba, Amini, Arash A., Rangan, Sundeep, Fletcher, Alyson K.
We consider the problem of estimating the parameters of a multivariate Bernoulli process with auto-regressive feedback in the high-dimensional setting where the number of samples available is much less than the number of parameters. This problem arises in learning interconnections of networks of dynamical systems with spiking or binary-valued data. We allow the process to depend on its past up to a lag $p$, for a general $p \ge 1$, allowing for more realistic modeling in many applications. We propose and analyze an $\ell_1$-regularized maximum likelihood estimator (MLE) under the assumption that the parameter tensor is approximately sparse. Rigorous analysis of such estimators is made challenging by the dependent and non-Gaussian nature of the process as well as the presence of the nonlinearities and multi-level feedback. We derive precise upper bounds on the mean-squared estimation error in terms of the number of samples, dimensions of the process, the lag $p$ and other key statistical properties of the model. The ideas presented can be used in the high-dimensional analysis of regularized $M$-estimators for other sparse nonlinear and non-Gaussian processes with long-range dependence.
Human-in-the-loop Active Covariance Learning for Improving Prediction in Small Data Sets
Afrabandpey, Homayun, Peltola, Tomi, Kaski, Samuel
Learning predictive models from small high-dimensional data sets is a key problem in high-dimensional statistics. Expert knowledge elicitation can help, and a strong line of work focuses on directly eliciting informative prior distributions for parameters. This either requires considerable statistical expertise or is laborious, as the emphasis has been on accuracy and not on efficiency of the process. Another line of work queries about importance of features one at a time, assuming them to be independent and hence missing covariance information. In contrast, we propose eliciting expert knowledge about pairwise feature similarities, to borrow statistical strength in the predictions, and using sequential decision making techniques to minimize the effort of the expert. Empirical results demonstrate improvement in predictive performance on both simulated and real data, in high-dimensional linear regression tasks, where we learn the covariance structure with a Gaussian process, based on sequential elicitation.
Doubly Semi-Implicit Variational Inference
Molchanov, Dmitry, Kharitonov, Valery, Sobolev, Artem, Vetrov, Dmitry
We extend the existing framework of semi-implicit variational inference (SIVI) and introduce doubly semi-implicit variational inference (DSIVI), a way to perform variational inference and learning when both the approximate posterior and the prior distribution are semi-implicit. In other words, DSIVI performs inference in models where the prior and the posterior can be expressed as an intractable infinite mixture of some analytic density with a highly flexible implicit mixing distribution. We provide a sandwich bound on the evidence lower bound (ELBO) objective that can be made arbitrarily tight. Unlike discriminator-based and kernel-based approaches to implicit variational inference, DSIVI optimizes a proper lower bound on ELBO that is asymptotically exact. We evaluate DSIVI on a set of problems that benefit from implicit priors. In particular, we show that DSIVI gives rise to a simple modification of VampPrior, the current state-of-the-art prior for variational autoencoders, which improves its performance.
Tuning Hyperparameters without Grad Students: Scalable and Robust Bayesian Optimisation with Dragonfly
Kandasamy, Kirthevasan, Vysyaraju, Karun Raju, Neiswanger, Willie, Paria, Biswajit, Collins, Christopher R., Schneider, Jeff, Poczos, Barnabas, Xing, Eric P.
Bayesian Optimisation (BO), refers to a suite of techniques for global optimisation of expensive black box functions, which use introspective Bayesian models of the function to efficiently find the optimum. While BO has been applied successfully in many applications, modern optimisation tasks usher in new challenges where conventional methods fail spectacularly. In this work, we present Dragonfly, an open source Python library for scalable and robust BO. Dragonfly incorporates multiple recently developed methods that allow BO to be applied in challenging real world settings; these include better methods for handling higher dimensional domains, methods for handling multi-fidelity evaluations when cheap approximations of an expensive function are available, methods for optimising over structured combinatorial spaces, such as the space of neural network architectures, and methods for handling parallel evaluations. Additionally, we develop new methodological improvements in BO for selecting the Bayesian model, selecting the acquisition function, and optimising over complex domains with different variable types and additional constraints. We compare Dragonfly to a suite of other packages and algorithms for global optimisation and demonstrate that when the above methods are integrated, they enable significant improvements in the performance of BO. The Dragonfly library is available at dragonfly.github.io.
Modeling Complementary Products and Customer Preferences with Context Knowledge for Online Recommendation
Xu, Da, Ruan, Chuanwei, Korpeoglu, Evren, Kumar, Sushant, Achan, Kannan
Modeling item complementariness and user preferences from purchase data is essential for learning good representations of products and customers, which empowers the modern personalized recommender system for Walmart's e-commerce platform. The intrinsic complementary relationship among products captures the buy-also-buy patterns and provides great sources for recommendations. Product complementary patterns, though often reflected by population purchase behaviors, are not separable from customer-specific bias in purchase data. We propose a unified model with Bayesian network structure that takes account of both factors. In the meantime, we merge the contextual knowledge of both products and customers into their representations. We also use the dual product embeddings to capture the intrinsic properties of complementariness, such as asymmetry. The separating hyperplane theory sheds light on the geometric interpretation of using the additional embedding. We conduct extensive evaluations on our model before final production, and propose a novel ranking criterion based on product and customer embeddings. Our method compares favorably to existing approaches in various offline and online testings, and case studies demonstrate the advantage and usefulness of the dual product embeddings as well as the user embeddings.
Deep Switch Networks for Generating Discrete Data and Language
Delgosha, Payam, Goela, Naveen
Multilayer switch networks are proposed as artificial generators of high-dimensional discrete data (e.g., binary vectors, categorical data, natural language, network log files, and discrete-valued time series). Unlike deconvolution networks which generate continuous-valued data and which consist of upsampling filters and reverse pooling layers, multilayer switch networks are composed of adaptive switches which model conditional distributions of discrete random variables. An interpretable, statistical framework is introduced for training these nonlinear networks based on a maximum-likelihood objective function. To learn network parameters, stochastic gradient descent is applied to the objective. This direct optimization is stable until convergence, and does not involve back-propagation over separate encoder and decoder networks, or adversarial training of dueling networks. While training remains tractable for moderately sized networks, Markov-chain Monte Carlo (MCMC) approximations of gradients are derived for deep networks which contain latent variables. The statistical framework is evaluated on synthetic data, high-dimensional binary data of handwritten digits, and web-crawled natural language data. Aspects of the model's framework such as interpretability, computational complexity, and generalization ability are discussed.
Gaussian Process Optimization with Adaptive Sketching: Scalable and No Regret
Calandriello, Daniele, Carratino, Luigi, Lazaric, Alessandro, Valko, Michal, Rosasco, Lorenzo
Gaussian processes (GP) are a popular Bayesian approach for the optimization of black-box functions. Despite their effectiveness in simple problems, GP-based algorithms hardly scale to complex high-dimensional functions, as their per-iteration time and space cost is at least quadratic in the number of dimensions $d$ and iterations $t$. Given a set of $A$ alternative to choose from, the overall runtime $O(t^3A)$ quickly becomes prohibitive. In this paper, we introduce BKB (budgeted kernelized bandit), a novel approximate GP algorithm for optimization under bandit feedback that achieves near-optimal regret (and hence near-optimal convergence rate) with near-constant per-iteration complexity and no assumption on the input space or covariance of the GP. Combining a kernelized linear bandit algorithm (GP-UCB) with randomized matrix sketching technique (i.e., leverage score sampling), we prove that selecting inducing points based on their posterior variance gives an accurate low-rank approximation of the GP, preserving variance estimates and confidence intervals. As a consequence, BKB does not suffer from variance starvation, an important problem faced by many previous sparse GP approximations. Moreover, we show that our procedure selects at most $\tilde{O}(d_{eff})$ points, where $d_{eff}$ is the effective dimension of the explored space, which is typically much smaller than both $d$ and $t$. This greatly reduces the dimensionality of the problem, thus leading to a $O(TAd_{eff}^2)$ runtime and $O(A d_{eff})$ space complexity.