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DTOR: Decision Tree Outlier Regressor to explain anomalies

arXiv.org Machine Learning

Explaining outliers occurrence and mechanism of their occurrence can be extremely important in a variety of domains. Malfunctions, frauds, threats, in addition to being correctly identified, oftentimes need a valid explanation in order to effectively perform actionable counteracts. The ever more widespread use of sophisticated Machine Learning approach to identify anomalies make such explanations more challenging. We present the Decision Tree Outlier Regressor (DTOR), a technique for producing rule-based explanations for individual data points by estimating anomaly scores generated by an anomaly detection model. This is accomplished by first applying a Decision Tree Regressor, which computes the estimation score, and then extracting the relative path associated with the data point score. Our results demonstrate the robustness of DTOR even in datasets with a large number of features. Additionally, in contrast to other rule-based approaches, the generated rules are consistently satisfied by the points to be explained. Furthermore, our evaluation metrics indicate comparable performance to Anchors in outlier explanation tasks, with reduced execution time.


XCoOp: Explainable Prompt Learning for Computer-Aided Diagnosis via Concept-guided Context Optimization

arXiv.org Artificial Intelligence

Utilizing potent representations of the large vision-language models (VLMs) to accomplish various downstream tasks has attracted increasing attention. Within this research field, soft prompt learning has become a representative approach for efficiently adapting VLMs such as CLIP, to tasks like image classification. However, most existing prompt learning methods learn text tokens that are unexplainable, which cannot satisfy the stringent interpretability requirements of Explainable Artificial Intelligence (XAI) in high-stakes scenarios like healthcare. To address this issue, we propose a novel explainable prompt learning framework that leverages medical knowledge by aligning the semantics of images, learnable prompts, and clinical concept-driven prompts at multiple granularities. Moreover, our framework addresses the lack of valuable concept annotations by eliciting knowledge from large language models and offers both visual and textual explanations for the prompts. Extensive experiments and explainability analyses conducted on various datasets, with and without concept labels, demonstrate that our method simultaneously achieves superior diagnostic performance, flexibility, and interpretability, shedding light on the effectiveness of foundation models in facilitating XAI. The code will be made publically available.


Interpreting What Typical Fault Signals Look Like via Prototype-matching

arXiv.org Artificial Intelligence

Neural networks, with powerful nonlinear mapping and classification capabilities, are widely applied in mechanical fault diagnosis to ensure safety. However, being typical black-box models, their application is limited in high-reliability-required scenarios. To understand the classification logic and explain what typical fault signals look like, the prototype matching network (PMN) is proposed by combining the human-inherent prototype-matching with autoencoder (AE). The PMN matches AE-extracted feature with each prototype and selects the most similar prototype as the prediction result. It has three interpreting paths on classification logic, fault prototypes, and matching contributions. Conventional diagnosis and domain generalization experiments demonstrate its competitive diagnostic performance and distinguished advantages in representation learning. Besides, the learned typical fault signals (i.e., sample-level prototypes) showcase the ability for denoising and extracting subtle key features that experts find challenging to capture. This ability broadens human understanding and provides a promising solution from interpretability research to AI-for-Science.


A Concept-based Interpretable Model for the Diagnosis of Choroid Neoplasias using Multimodal Data

arXiv.org Artificial Intelligence

Diagnosing rare diseases presents a common challenge in clinical practice, necessitating the expertise of specialists for accurate identification. The advent of machine learning offers a promising solution, while the development of such technologies is hindered by the scarcity of data on rare conditions and the demand for models that are both interpretable and trustworthy in a clinical context. Interpretable AI, with its capacity for human-readable outputs, can facilitate validation by clinicians and contribute to medical education. In the current work, we focus on choroid neoplasias, the most prevalent form of eye cancer in adults, albeit rare with 5.1 per million. We built the so-far largest dataset consisting of 750 patients, incorporating three distinct imaging modalities collected from 2004 to 2022. Our work introduces a concept-based interpretable model that distinguishes between three types of choroidal tumors, integrating insights from domain experts via radiological reports. Remarkably, this model not only achieves an F1 score of 0.91, rivaling that of black-box models, but also boosts the diagnostic accuracy of junior doctors by 42%. This study highlights the significant potential of interpretable machine learning in improving the diagnosis of rare diseases, laying a groundwork for future breakthroughs in medical AI that could tackle a wider array of complex health scenarios.


Multiple Instance Learning for Glioma Diagnosis using Hematoxylin and Eosin Whole Slide Images: An Indian Cohort Study

arXiv.org Artificial Intelligence

The effective management of brain tumors relies on precise typing, subtyping, and grading. This study advances patient care with findings from rigorous multiple instance learning experimentations across various feature extractors and aggregators in brain tumor histopathology. It establishes new performance benchmarks in glioma subtype classification across multiple datasets, including a novel dataset focused on the Indian demographic (IPD- Brain), providing a valuable resource for existing research. Using a ResNet-50, pretrained on histopathology datasets for feature extraction, combined with the Double-Tier Feature Distillation (DTFD) feature aggregator, our approach achieves state-of-the-art AUCs of 88.08 on IPD-Brain and 95.81 on the TCGA-Brain dataset, respectively, for three-way glioma subtype classification. Moreover, it establishes new benchmarks in grading and detecting IHC molecular biomarkers (IDH1R132H, TP53, ATRX, Ki-67) through H&E stained whole slide images for the IPD-Brain dataset. The work also highlights a significant correlation between the model decision-making processes and the diagnostic reasoning of pathologists, underscoring its capability to mimic professional diagnostic procedures.


AFBT GAN: enhanced explainability and diagnostic performance for cognitive decline by counterfactual generative adversarial network

arXiv.org Artificial Intelligence

Existing explanation results of functional connectivity (FC) are normally generated by using classification result labels and correlation analysis methods such as Pearson's correlation or gradient backward. However, the diagnostic model is still trained on the black box model and might lack the attention of FCs in important regions during the training. To enhance the explainability and improve diagnostic performance, providing prior knowledge on neurodegeneration-related regions when healthy subjects (HC) develop into subject cognitive decline (SCD) and mild cognitive impairment (MCI) for the diagnostic model is a key step. To better determine the neurodegeneration-related regions, we employ counterfactual reasoning to generate the target label FC matrices derived from source label FC and then subtract source label FC with target label FC. The counterfactual reasoning architecture is constructed by adaptive forward and backward transformer generative adversarial network (AFBT GAN), which is specifically designed by network property in FC and inverse patch embedding operation in the transformer. The specific design can make the model focus more on the current network correlation and employ the global insight of the transformer to reconstruct FC, which both help the generation of high-quality target label FC. The validation experiments are conducted on both clinical and public datasets, the generated attention map are both vital correlated to cognitive function and the diagnostic performance is also significant. The code is available at https://github.com/SXR3015/AFBT-GAN.


Causal Bandits with General Causal Models and Interventions

arXiv.org Machine Learning

This paper considers causal bandits (CBs) for the sequential design of interventions in a causal system. The objective is to optimize a reward function via minimizing a measure of cumulative regret with respect to the best sequence of interventions in hindsight. The paper advances the results on CBs in three directions. First, the structural causal models (SCMs) are assumed to be unknown and drawn arbitrarily from a general class $\mathcal{F}$ of Lipschitz-continuous functions. Existing results are often focused on (generalized) linear SCMs. Second, the interventions are assumed to be generalized soft with any desired level of granularity, resulting in an infinite number of possible interventions. The existing literature, in contrast, generally adopts atomic and hard interventions. Third, we provide general upper and lower bounds on regret. The upper bounds subsume (and improve) known bounds for special cases. The lower bounds are generally hitherto unknown. These bounds are characterized as functions of the (i) graph parameters, (ii) eluder dimension of the space of SCMs, denoted by $\operatorname{dim}(\mathcal{F})$, and (iii) the covering number of the function space, denoted by ${\rm cn}(\mathcal{F})$. Specifically, the cumulative achievable regret over horizon $T$ is $\mathcal{O}(K d^{L-1}\sqrt{T\operatorname{dim}(\mathcal{F}) \log({\rm cn}(\mathcal{F}))})$, where $K$ is related to the Lipschitz constants, $d$ is the graph's maximum in-degree, and $L$ is the length of the longest causal path. The upper bound is further refined for special classes of SCMs (neural network, polynomial, and linear), and their corresponding lower bounds are provided.


StreaMulT: Streaming Multimodal Transformer for Heterogeneous and Arbitrary Long Sequential Data

arXiv.org Artificial Intelligence

The increasing complexity of Industry 4.0 systems brings new challenges regarding predictive maintenance tasks such as fault detection and diagnosis. A corresponding and realistic setting includes multi-source data streams from different modalities, such as sensors measurements time series, machine images, textual maintenance reports, etc. These heterogeneous multimodal streams also differ in their acquisition frequency, may embed temporally unaligned information and can be arbitrarily long, depending on the considered system and task. Whereas multimodal fusion has been largely studied in a static setting, to the best of our knowledge, there exists no previous work considering arbitrarily long multimodal streams alongside with related tasks such as prediction across time. Thus, in this paper, we first formalize this paradigm of heterogeneous multimodal learning in a streaming setting as a new one. To tackle this challenge, we propose StreaMulT, a Streaming Multimodal Transformer relying on cross-modal attention and on a memory bank to process arbitrarily long input sequences at training time and run in a streaming way at inference. StreaMulT improves the state-of-the-art metrics on CMU-MOSEI dataset for Multimodal Sentiment Analysis task, while being able to deal with much longer inputs than other multimodal models. The conducted experiments eventually highlight the importance of the textual embedding layer, questioning recent improvements in Multimodal Sentiment Analysis benchmarks.


Scalable and reliable deep transfer learning for intelligent fault detection via multi-scale neural processes embedded with knowledge

arXiv.org Artificial Intelligence

Deep transfer learning (DTL) is a fundamental method in the field of Intelligent Fault Detection (IFD). It aims to mitigate the degradation of method performance that arises from the discrepancies in data distribution between training set (source domain) and testing set (target domain). Considering the fact that fault data collection is challenging and certain faults are scarce, DTL-based methods face the limitation of available observable data, which reduces the detection performance of the methods in the target domain. Furthermore, DTL-based methods lack comprehensive uncertainty analysis that is essential for building reliable IFD systems. To address the aforementioned problems, this paper proposes a novel DTL-based method known as Neural Processes-based deep transfer learning with graph convolution network (GTNP). Feature-based transfer strategy of GTNP bridges the data distribution discrepancies of source domain and target domain in high-dimensional space. Both the joint modeling based on global and local latent variables and sparse sampling strategy reduce the demand of observable data in the target domain. The multi-scale uncertainty analysis is obtained by using the distribution characteristics of global and local latent variables. Global analysis of uncertainty enables GTNP to provide quantitative values that reflect the complexity of methods and the difficulty of tasks. Local analysis of uncertainty allows GTNP to model uncertainty (confidence of the fault detection result) at each sample affected by noise and bias. The validation of the proposed method is conducted across 3 IFD tasks, consistently showing the superior detection performance of GTNP compared to the other DTL-based methods.


Improving Model's Interpretability and Reliability using Biomarkers

arXiv.org Artificial Intelligence

Accurate and interpretable diagnostic models are crucial in the safety-critical field of medicine. We investigate the interpretability of our proposed biomarker-based lung ultrasound diagnostic pipeline to enhance clinicians' diagnostic capabilities. The objective of this study is to assess whether explanations from a decision tree classifier, utilizing biomarkers, can improve users' ability to identify inaccurate model predictions compared to conventional saliency maps. Our findings demonstrate that decision tree explanations, based on clinically established biomarkers, can assist clinicians in detecting false positives, thus improving the reliability of diagnostic models in medicine.