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Rethinking Hybrid Retrieval: When Small Embeddings and LLM Re-ranking Beat Bigger Models

arXiv.org Artificial Intelligence

This paper presents a comparison of embedding models in tri-modal hybrid retrieval for Retrieval-Augmented Generation (RAG) systems. We investigate the fusion of dense semantic, sparse lexical, and graph-based embeddings, focusing on the performance of the MiniLM-v6 and BGE-Large architectures. Contrary to conventional assumptions, our results show that the compact MiniLM-v6 outperforms the larger BGE-Large when integrated with LLM-based re-ranking within our tri-modal hybrid framework. Experiments conducted on the SciFact, FIQA, and NFCorpus datasets demonstrate significant improvements in retrieval quality with the MiniLM-v6 configuration. The performance difference is particularly pronounced in agentic re-ranking scenarios, indicating better alignment between MiniLM-v6's embedding space and LLM reasoning. Our findings suggest that embedding model selection for RAG systems should prioritize compatibility with multi-signal fusion and LLM alignment, rather than relying solely on larger models. This approach may reduce computational requirements while improving retrieval accuracy and efficiency.


Enhancing Tool Learning in Large Language Models with Hierarchical Error Checklists

arXiv.org Artificial Intelligence

Large language models (LLMs) have significantly advanced natural language processing, particularly through the integration of external tools and APIs. However, their effectiveness is frequently hampered by parameter mis-filling during tool calling. In this paper, we propose the Hierarchical Tool Error Checklist (HiTEC) framework to systematically diagnose and mitigate tool-calling errors without relying on extensive real-world interactions. HiTEC introduces a two-tiered approach: a global error checklist that identifies common, cross-tool issues, and a local error checklist that targets tool-specific and contextual failures. Building on this structure, we propose two deployments: HiTEC-In Context Learning (HiTEC-ICL) and HiTEC-Kahneman-Tversky Optimization (HiTEC-KTO). HiTEC-ICL embeds the global checklist in the initial prompts and leverages a two-round conversational interaction to dynamically refine parameter handling, while HiTEC-KTO generates high-quality negative examples to drive fine-tuning via preference-based optimization. Extensive experiments across five public datasets demonstrate that our framework significantly improves parameter-filling accuracy and tool-calling success rates compared to baseline methods.


Amadeus-Verbo Technical Report: The powerful Qwen2.5 family models trained in Portuguese

arXiv.org Artificial Intelligence

This report introduces the experience of developing Amadeus Verbo, a family of large language models for Brazilian Portuguese. To handle diverse use cases, Amadeus Verbo includes base-tuned, merged, and instruction-tuned models in sizes of 0.5B, 1.5B, 3B, 7B, 14B, 32B, and 72B parameters. Thus, the main objective is to show how easy it is to fine-tune foundation models to democratize the open-source development of Brazilian Portuguese LLMs when data and resources are available. Amadeus-Verbo family models are all available at HuggingFace at https://huggingface.co/collections/amadeusai/amadeus-verbo-qwen25-67cf2e7aae69ce2b3bcdcfda.


MolTextNet: A Two-Million Molecule-Text Dataset for Multimodal Molecular Learning

arXiv.org Artificial Intelligence

Small molecules are essential to drug discovery, and graph-language models hold promise for learning molecular properties and functions from text. However, existing molecule-text datasets are limited in scale and informativeness, restricting the training of generalizable multimodal models. We present MolTextNet, a dataset of 2.5 million high-quality molecule-text pairs designed to overcome these limitations. To construct it, we propose a synthetic text generation pipeline that integrates structural features, computed properties, bioactivity data, and synthetic complexity. Using GPT-4o-mini, we create structured descriptions for 2.5 million molecules from ChEMBL35, with text over 10 times longer than prior datasets. MolTextNet supports diverse downstream tasks, including property prediction and structure retrieval. Pretraining CLIP-style models with Graph Neural Networks and ModernBERT on MolTextNet yields improved performance, highlighting its potential for advancing foundational multimodal modeling in molecular science. Our dataset is available at https://huggingface.co/datasets/liuganghuggingface/moltextnet.


MIRAGE: Assessing Hallucination in Multimodal Reasoning Chains of MLLM

arXiv.org Artificial Intelligence

Multimodal hallucination in multimodal large language models (MLLMs) restricts the correctness of MLLMs. However, multimodal hallucinations are multi-sourced and arise from diverse causes. Existing benchmarks fail to adequately distinguish between perception-induced hallucinations and reasoning-induced hallucinations. This failure constitutes a significant issue and hinders the diagnosis of multimodal reasoning failures within MLLMs. To address this, we propose the {\dataset} benchmark, which isolates reasoning hallucinations by constructing questions where input images are correctly perceived by MLLMs yet reasoning errors persist. {\dataset} introduces multi-granular evaluation metrics: accuracy, factuality, and LLMs hallucination score for hallucination quantification. Our analysis reveals that (1) the model scale, data scale, and training stages significantly affect the degree of logical, fabrication, and factual hallucinations; (2) current MLLMs show no effective improvement on spatial hallucinations caused by misinterpreted spatial relationships, indicating their limited visual reasoning capabilities; and (3) question types correlate with distinct hallucination patterns, highlighting targeted challenges and potential mitigation strategies. To address these challenges, we propose {\method}, a method that combines curriculum reinforcement fine-tuning to encourage models to generate logic-consistent reasoning chains by stepwise reducing learning difficulty, and collaborative hint inference to reduce reasoning complexity. {\method} establishes a baseline on {\dataset}, and reduces the logical hallucinations in original base models.


Automated Structured Radiology Report Generation

arXiv.org Artificial Intelligence

Automated radiology report generation from chest X-ray (CXR) images has the potential to improve clinical efficiency and reduce radiologists' workload. However, most datasets, including the publicly available MIMIC-CXR and CheXpert Plus, consist entirely of free-form reports, which are inherently variable and unstructured. This variability poses challenges for both generation and evaluation: existing models struggle to produce consistent, clinically meaningful reports, and standard evaluation metrics fail to capture the nuances of radiological interpretation. To address this, we introduce Structured Radiology Report Generation (SRRG), a new task that reformulates free-text radiology reports into a standardized format, ensuring clarity, consistency, and structured clinical reporting. We create a novel dataset by restructuring reports using large language models (LLMs) following strict structured reporting desiderata. Additionally, we introduce SRR-BERT, a fine-grained disease classification model trained on 55 labels, enabling more precise and clinically informed evaluation of structured reports. To assess report quality, we propose F1-SRR-BERT, a metric that leverages SRR-BERT's hierarchical disease taxonomy to bridge the gap between free-text variability and structured clinical reporting. We validate our dataset through a reader study conducted by five board-certified radiologists and extensive benchmarking experiments.


LlamaRL: A Distributed Asynchronous Reinforcement Learning Framework for Efficient Large-scale LLM Training

arXiv.org Artificial Intelligence

Reinforcement Learning (RL) has become the most effective post-training approach for improving the capabilities of Large Language Models (LLMs). In practice, because of the high demands on latency and memory, it is particularly challenging to develop an efficient RL framework that reliably manages policy models with hundreds to thousands of billions of parameters. In this paper, we present LlamaRL, a fully distributed, asynchronous RL framework optimized for efficient training of large-scale LLMs with various model sizes (8B, 70B, and 405B parameters) on GPU clusters ranging from a handful to thousands of devices. LlamaRL introduces a streamlined, single-controller architecture built entirely on native PyTorch, enabling modularity, ease of use, and seamless scalability to thousands of GPUs. We also provide a theoretical analysis of LlamaRL's efficiency, including a formal proof that its asynchronous design leads to strict RL speed-up. Empirically during the Llama 3 post-training, by leveraging best practices such as colocated model offloading, asynchronous off-policy training, and distributed direct memory access for weight synchronization, LlamaRL achieves significant efficiency gains -- up to 10.7x speed-up compared to DeepSpeed-Chat-like systems on a 405B-parameter policy model. Furthermore, the efficiency advantage continues to grow with increasing model scale, demonstrating the framework's suitability for future large-scale RL training.


MedHELM: Holistic Evaluation of Large Language Models for Medical Tasks

arXiv.org Artificial Intelligence

While large language models (LLMs) achieve near-perfect scores on medical licensing exams, these evaluations inadequately reflect the complexity and diversity of real-world clinical practice. We introduce MedHELM, an extensible evaluation framework for assessing LLM performance for medical tasks with three key contributions. First, a clinician-validated taxonomy spanning 5 categories, 22 subcategories, and 121 tasks developed with 29 clinicians. Second, a comprehensive benchmark suite comprising 35 benchmarks (17 existing, 18 newly formulated) providing complete coverage of all categories and subcategories in the taxonomy. Third, a systematic comparison of LLMs with improved evaluation methods (using an LLM-jury) and a cost-performance analysis. Evaluation of 9 frontier LLMs, using the 35 benchmarks, revealed significant performance variation. Advanced reasoning models (DeepSeek R1: 66% win-rate; o3-mini: 64% win-rate) demonstrated superior performance, though Claude 3.5 Sonnet achieved comparable results at 40% lower estimated computational cost. On a normalized accuracy scale (0-1), most models performed strongly in Clinical Note Generation (0.73-0.85) and Patient Communication & Education (0.78-0.83), moderately in Medical Research Assistance (0.65-0.75), and generally lower in Clinical Decision Support (0.56-0.72) and Administration & Workflow (0.53-0.63). Our LLM-jury evaluation method achieved good agreement with clinician ratings (ICC = 0.47), surpassing both average clinician-clinician agreement (ICC = 0.43) and automated baselines including ROUGE-L (0.36) and BERTScore-F1 (0.44). Claude 3.5 Sonnet achieved comparable performance to top models at lower estimated cost. These findings highlight the importance of real-world, task-specific evaluation for medical use of LLMs and provides an open source framework to enable this.


Bounded Rationality for LLMs: Satisficing Alignment at Inference-Time

arXiv.org Artificial Intelligence

Aligning large language models with humans is challenging due to the inherently multifaceted nature of preference feedback. While existing approaches typically frame this as a multi-objective optimization problem, they often overlook how humans actually make decisions. Research on bounded rationality suggests that human decision making follows satisficing strategies-optimizing primary objectives while ensuring others meet acceptable thresholds. To bridge this gap and operationalize the notion of satisficing alignment, we propose SITAlign: an inference time framework that addresses the multifaceted nature of alignment by maximizing a primary objective while satisfying threshold-based constraints on secondary criteria. We provide theoretical insights by deriving sub-optimality bounds of our satisficing based inference alignment approach. We empirically validate SITAlign's performance through extensive experimentation on multiple benchmarks. For instance, on the PKU-SafeRLHF dataset with the primary objective of maximizing helpfulness while ensuring a threshold on harmlessness, SITAlign outperforms the state-of-the-art multi objective decoding strategy by a margin of 22.3% in terms of GPT-4 win-tie rate for helpfulness reward while adhering to the threshold on harmlessness.


Fortune: Formula-Driven Reinforcement Learning for Symbolic Table Reasoning in Language Models

arXiv.org Artificial Intelligence

Tables are a fundamental structure for organizing and analyzing data, making effective table understanding a critical capability for intelligent systems. While large language models (LMs) demonstrate strong general reasoning abilities, they continue to struggle with accurate numerical or symbolic reasoning over tabular data, especially in complex scenarios. Spreadsheet formulas provide a powerful and expressive medium for representing executable symbolic operations, encoding rich reasoning patterns that remain largely underutilized. In this paper, we propose Formula Tuning (Fortune), a reinforcement learning (RL) framework that trains LMs to generate executable spreadsheet formulas for question answering over general tabular data. Formula Tuning reduces the reliance on supervised formula annotations by using binary answer correctness as a reward signal, guiding the model to learn formula derivation through reasoning. We provide a theoretical analysis of its advantages and demonstrate its effectiveness through extensive experiments on seven table reasoning benchmarks. Formula Tuning substantially enhances LM performance, particularly on multi-step numerical and symbolic reasoning tasks, enabling a 7B model to outperform OpenAI o1 on table understanding. This highlights the potential of formula-driven RL to advance symbolic table reasoning in LMs.