Long sequences are critical for applications like RAG, long document summarization, multi-modality, etc., and modern LLMs, like Llama 4 Scout, support max sequence length of up to 10 million tokens. However, outside of enterprise labs, long sequence training is challenging for the AI community with limited system support in the open-source space. Out-of-box, even on a modern NVIDIA H100 80GB GPU cluster, training Llama 8B model with sequence over 32K runs out of memory on a basic Hugging Face (HF) model due to two reasons: i) LLM training workloads are not optimized to fully leverage a single GPU memory, ii) existing solutions for leveraging multiple GPU memory are not easily available to HF models, making long sequence training inaccessible. We address this with Arctic Long Sequence Training (ALST). It offers a combination of attention-agnostic single GPU and multi-GPU memory optimizations, that enables it to support out-of-box training of multi-million sequence length for a wide variety of HF models. ALST supports training Meta's Llama 8B model with 500K sequence length on a single H100 GPU, 3.7M on a single 8xH100 GPU node, and over 15M on a 4 node cluster, an increase of over 400x compared to the 32K baseline for the latter. ALST is fully compatible with HF models and open-sourced via Deepspeed https://www.deepspeed.ai/tutorials/ulysses-alst-sequence-pallellism/ and Arctic Training https://github.com/snowflakedb/ArcticTraining/blob/main/projects/sequence-parallelism/README.md.

Enhancing clinical decision support (CDS), reducing documentation burdens, and improving patient health literacy remain persistent challenges in digital health. This paper presents an open-source, agent-based framework that integrates Large Language Models (LLMs) with HL7 FHIR data via the Model Context Protocol (MCP) for dynamic extraction and reasoning over electronic health records (EHRs). Built on the established MCP-FHIR implementation, the framework enables declarative access to diverse FHIR resources through JSON-based configurations, supporting real-time summarization, interpretation, and personalized communication across multiple user personas, including clinicians, caregivers, and patients. To ensure privacy and reproducibility, the framework is evaluated using synthetic EHR data from the SMART Health IT sandbox (https://r4.smarthealthit.org/), which conforms to the FHIR R4 standard. Unlike traditional approaches that rely on hardcoded retrieval and static workflows, the proposed method delivers scalable, explainable, and interoperable AI-powered EHR applications. The agentic architecture further supports multiple FHIR formats, laying a robust foundation for advancing personalized digital health solutions.

The ability of large language models (LLMs) to utilize external tools has enabled them to tackle an increasingly diverse range of tasks. However, as the tasks become more complex and long-horizon, the intricate tool utilization process may trigger various unexpected errors. Therefore, how to effectively handle such errors, including identifying, diagnosing, and recovering from them, has emerged as a key research direction for advancing tool learning. In this work, we first extensively analyze the types of errors encountered during the function-calling process on several competitive tool evaluation benchmarks. Based on it, we introduce CRITICTOOL, a comprehensive critique evaluation benchmark specialized for tool learning. Building upon a novel evolutionary strategy for dataset construction, CRITICTOOL holds diverse tool-use errors with varying complexities, which better reflects real-world scenarios. We conduct extensive experiments on CRITICTOOL, and validate the generalization and effectiveness of our constructed benchmark strategy. We also provide an in-depth analysis of the tool reflection ability on various LLMs, offering a new perspective on the field of tool learning in LLMs. The code is available at \href{https://github.com/Shellorley0513/CriticTool}{https://github.com/Shellorley0513/CriticTool}.

We present the Comprehensive Verilog Design Problems (CVDP) benchmark, a new dataset and infrastructure to advance LLM and agent research in hardware design and verification. CVDP includes 783 problems across 13 task categories, covering RTL generation, verification, debugging, specification alignment, and technical Q&A authored by experienced hardware engineers. Problems are offered in both non-agentic and agentic formats. The benchmark introduces more realistic and challenging contexts than prior work, with state-of-the-art models achieving no more than 34% pass@1 on code generation. Agentic tasks$\unicode{x2013}$especially those involving RTL reuse and verification$\unicode{x2013}$are particularly difficult. Evaluation uses open-source tools and model scoring infrastructure, with comprehension tasks assessed via BLEU and LLM-based judging. CVDP reveals substantial gaps in current model capabilities, underscoring the need for continued research toward robust, real-world hardware design automation.

Instruction-based image editing, which aims to modify the image faithfully according to the instruction while preserving irrelevant content unchanged, has made significant progress. However, there still lacks a comprehensive metric for assessing the editing quality. Existing metrics either require high human evaluation costs, which hinder large-scale evaluation, or are adapted from other tasks and lose task-specific concerns, failing to comprehensively evaluate both instruction-based modification and preservation of irrelevant regions, resulting in biased evaluation. To tackle this, we introduce a new metric called Balancing Preservation and Modification (BPM), tailored for instruction-based image editing by explicitly disentangling the image into editing-relevant and irrelevant regions for specific consideration. We first identify and locate editing-relevant regions, followed by a two-tier process to assess editing quality: Region-Aware Judge evaluates whether the position and size of the edited region align with the instruction, and Semantic-Aware Judge further assesses the instruction content compliance within editing-relevant regions as well as content preservation within irrelevant regions, yielding comprehensive and interpretable quality assessment. Moreover, the editing-relevant region localization in BPM can be integrated into image editing approaches to improve editing quality, demonstrating its broad applicability. We verify the effectiveness of the BPM metric on comprehensive instruction-editing data, and the results show the highest alignment with human evaluation compared to existing metrics, indicating its efficacy. Code is available at: https://joyli-x.github.io/BPM/

The increasing sophistication of large language models (LLMs) has sparked growing concerns regarding their potential role in exacerbating ideological polarization through the automated generation of persuasive and biased content. This study explores the extent to which fine-tuned LLMs can replicate and amplify polarizing discourse within online environments. Using a curated dataset of politically charged discussions extracted from Reddit, we fine-tune an open-source LLM to produce context-aware and ideologically aligned responses. The model's outputs are evaluated through linguistic analysis, sentiment scoring, and human annotation, with particular attention to credibility and rhetorical alignment with the original discourse. The results indicate that, when trained on partisan data, LLMs are capable of producing highly plausible and provocative comments, often indistinguishable from those written by humans. These findings raise significant ethical questions about the use of AI in political discourse, disinformation, and manipulation campaigns. The paper concludes with a discussion of the broader implications for AI governance, platform regulation, and the development of detection tools to mitigate adversarial fine-tuning risks.

Recent advances in vision language models (VLMs) have enabled broad progress in the general medical field. However, pathology still remains a more challenging subdomain, with current pathology specific VLMs exhibiting limitations in both diagnostic accuracy and reasoning plausibility. Such shortcomings are largely attributable to the nature of current pathology datasets, which are primarily composed of image description pairs that lack the depth and structured diagnostic paradigms employed by real world pathologists. In this study, we leverage pathology textbooks and real world pathology experts to construct high-quality, reasoning-oriented datasets. Building on this, we introduce Patho-R1, a multimodal RL-based pathology Reasoner, trained through a three-stage pipeline: (1) continued pretraining on 3.5 million image-text pairs for knowledge infusion; (2) supervised fine-tuning on 500k high-quality Chain-of-Thought samples for reasoning incentivizing; (3) reinforcement learning using Group Relative Policy Optimization and Decoupled Clip and Dynamic sAmpling Policy Optimization strategies for multimodal reasoning quality refinement. To further assess the alignment quality of our dataset, we propose Patho-CLIP, trained on the same figure-caption corpus used for continued pretraining. Comprehensive experimental results demonstrate that both Patho-CLIP and Patho-R1 achieve robust performance across a wide range of pathology-related tasks, including zero-shot classification, cross-modal retrieval, Visual Question Answering, and Multiple Choice Question. Our project is available at the Patho-R1 repository: https://github.com/Wenchuan-Zhang/Patho-R1.

Low-Rank Adaptation (LoRA) has emerged as a widely adopted parameter-efficient fine-tuning (PEFT) technique for foundation models. Recent work has highlighted an inherent asymmetry in the initialization of LoRA's low-rank factors, which has been present since its inception and was presumably derived experimentally. This paper focuses on providing a comprehensive theoretical characterization of asymmetric LoRA with frozen random factors. First, while existing research provides upper-bound generalization guarantees based on averages over multiple experiments, the behaviour of a single fine-tuning run with specific random factors remains an open question. We address this by investigating the concentration of the typical LoRA generalization gap around its mean. Our main upper bound reveals a sample complexity of $\tilde{\mathcal{O}}\left(\frac{\sqrt{r}}{\sqrt{N}}\right)$ with high probability for rank $r$ LoRAs trained on $N$ samples. Additionally, we also determine the fundamental limits in terms of sample efficiency, establishing a matching lower bound of $\mathcal{O}\left(\frac{1}{\sqrt{N}}\right)$. By more closely reflecting the practical scenario of a single fine-tuning run, our findings offer crucial insights into the reliability and practicality of asymmetric LoRA.

Graph Neural Networks (GNNs) have achieved state-of-the-art performance in node classification tasks but struggle with label noise in real-world data. Existing studies on graph learning with label noise commonly rely on class-dependent label noise, overlooking the complexities of instance-dependent noise and falling short of capturing real-world corruption patterns. We introduce BeGIN (Benchmarking for Graphs with Instance-dependent Noise), a new benchmark that provides realistic graph datasets with various noise types and comprehensively evaluates noise-handling strategies across GNN architectures, noisy label detection, and noise-robust learning. To simulate instance-dependent corruptions, BeGIN introduces algorithmic methods and LLM-based simulations. Our experiments reveal the challenges of instance-dependent noise, particularly LLM-based corruption, and underscore the importance of node-specific parameterization to enhance GNN robustness. By comprehensively evaluating noise-handling strategies, BeGIN provides insights into their effectiveness, efficiency, and key performance factors. We expect that BeGIN will serve as a valuable resource for advancing research on label noise in graphs and fostering the development of robust GNN training methods. The code is available at https://github.com/kimsu55/BeGIN.

This study presents a question-based knowledge encoding approach that improves retrieval-augmented generation (RAG) systems without requiring fine-tuning or traditional chunking. We encode textual content using generated questions that span the lexical and semantic space, creating targeted retrieval cues combined with a custom syntactic reranking method. In single-hop retrieval over 109 scientific papers, our approach achieves a Recall@3 of 0.84, outperforming traditional chunking methods by 60 percent. We also introduce "paper-cards", concise paper summaries under 300 characters, which enhance BM25 retrieval, increasing MRR@3 from 0.56 to 0.85 on simplified technical queries. For multihop tasks, our reranking method reaches an F1 score of 0.52 with LLaMA2-Chat-7B on the LongBench 2WikiMultihopQA dataset, surpassing chunking and fine-tuned baselines which score 0.328 and 0.412 respectively. This method eliminates fine-tuning requirements, reduces retrieval latency, enables intuitive question-driven knowledge access, and decreases vector storage demands by 80%, positioning it as a scalable and efficient RAG alternative.