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Efficient algorithm to select tuning parameters in sparse regression modeling with regularization

arXiv.org Machine Learning

In sparse regression modeling via regularization such as the lasso, it is important to select appropriate values of tuning parameters including regularization parameters. The choice of tuning parameters can be viewed as a model selection and evaluation problem. Mallows' $C_p$ type criteria may be used as a tuning parameter selection tool in lasso-type regularization methods, for which the concept of degrees of freedom plays a key role. In the present paper, we propose an efficient algorithm that computes the degrees of freedom by extending the generalized path seeking algorithm. Our procedure allows us to construct model selection criteria for evaluating models estimated by regularization with a wide variety of convex and non-convex penalties. Monte Carlo simulations demonstrate that our methodology performs well in various situations. A real data example is also given to illustrate our procedure.


Regularized Laplacian Estimation and Fast Eigenvector Approximation

Neural Information Processing Systems

Recently, Mahoney and Orecchia demonstrated that popular diffusion-based procedures to compute a quick approximation to the first nontrivial eigenvector of a data graph Laplacian exactly solve certain regularized Semi-Definite Programs (SDPs). In this paper, we extend that result by providing a statistical interpretation of their approximation procedure. Our interpretation will be analogous to the manner in which l2-regularized or l1-regularized l2 regression (often called Ridge regression and Lasso regression, respectively) can be interpreted in terms of a Gaussian prior or a Laplace prior, respectively, on the coefficient vector of the regression problem. Our framework will imply that the solutions to the Mahoney-Orecchia regularized SDP can be interpreted as regularized estimates of the pseudoinverse of the graph Laplacian. Conversely, it will imply that the solution to this regularized estimation problem can be computed very quickly by running, e.g., the fast diffusion-based PageRank procedure for computing an approximation to the first nontrivial eigenvector of the graph Laplacian. Empirical results are also provided to illustrate the manner in which approximate eigenvector computation implicitly performs statistical regularization, relative to running the corresponding exact algorithm.


Statistical Tests for Optimization Efficiency

Neural Information Processing Systems

Learning problems such as logistic regression are typically formulated as pure optimization problems defined on some loss function. We argue that this view ignores the fact that the loss function depends on stochastically generated data which in turn determines an intrinsic scale of precision for statistical estimation. By considering the statistical properties of the update variables used during the optimization (e.g. gradients), we can construct frequentist hypothesis tests to determine the reliability of these updates. We utilize subsets of the data for computing updates, and use the hypothesis tests for determining when the batch-size needs to be increased. This provides computational benefits and avoids overfitting by stopping when the batch-size has become equal to size of the full dataset. Moreover, the proposed algorithms depend on a single interpretable parameter โ€“ the probability for an update to be in the wrong direction โ€“ which is set to a single value across all algorithms and datasets. In this paper, we illustrate these ideas on three L1 regularized coordinate algorithms: L1 -regularized L2 -loss SVMs, L1 -regularized logistic regression, and the Lasso, but we emphasize that the underlying methods are much more generally applicable.


Anatomically Constrained Decoding of Finger Flexion from Electrocorticographic Signals

Neural Information Processing Systems

Brain-computer interfaces (BCIs) use brain signals to convey a user's intent. Some BCI approaches begin by decoding kinematic parameters of movements from brain signals, and then proceed to using these signals, in absence of movements, to allow a user to control an output. Recent results have shown that electrocorticographic (ECoG) recordings from the surface of the brain in humans can give information about kinematic parameters (e.g., hand velocity or finger flexion). The decoding approaches in these demonstrations usually employed classical classification/regression algorithms that derive a linear mapping between brain signals and outputs. However, they typically only incorporate little prior information about the target kinematic parameter.


Anatomically Constrained Decoding of Finger Flexion from Electrocorticographic Signals

Neural Information Processing Systems

Brain-computer interfaces (BCIs) use brain signals to convey a user's intent. Some BCI approaches begin by decoding kinematic parameters of movements from brain signals, and then proceed to using these signals, in absence of movements, to allow a user to control an output. Recent results have shown that electrocorticographic (ECoG) recordings from the surface of the brain in humans can give information about kinematic parameters (e.g., hand velocity or finger flexion). The decoding approaches in these demonstrations usually employed classical classification/regression algorithms that derive a linear mapping between brain signals and outputs. However, they typically only incorporate little prior information about the target kinematic parameter.


Co-Training for Domain Adaptation

Neural Information Processing Systems

Domain adaptation algorithms seek to generalize a model trained in a source domain to a new target domain. In many practical cases, the source and target distributions can differ substantially, and in some cases crucial target features may not have support in the source domain. In this paper we introduce an algorithm that bridges the gap between source and target domains by slowly adding both the target features and instances in which the current algorithm is the most confident. Our algorithm is a variant of co-training, and we name it CODA (Co-training for domain adaptation). Unlike the original co-training work, we do not assume a particular feature split. Instead, for each iteration of co-training, we add target features and formulate a single optimization problem which simultaneously learns a target predictor, a split of the feature space into views, and a shared subset of source and target features to include in the predictor. CODA significantly out-performs the state-of-the-art on the 12-domain benchmark data set of Blitzer et al.. Indeed, over a wide range (65 of 84 comparisons) of target supervision, ranging from no labeled target data to a relatively large number of target labels, CODA achieves the best performance.


Confidence Sets for Network Structure

Neural Information Processing Systems

Latent variable models are frequently used to identify structure in dichotomous network data, in part because they give rise to a Bernoulli product likelihood that is both well understood and consistent with the notion of exchangeable random graphs. In this article we propose conservative confidence sets that hold with respect to these underlying Bernoulli parameters as a function of any given partition of network nodes, enabling us to assess estimates of \emph{residual} network structure, that is, structure that cannot be explained by known covariates and thus cannot be easily verified by manual inspection. We demonstrate the proposed methodology by analyzing student friendship networks from the National Longitudinal Survey of Adolescent Health that include race, gender, and school year as covariates. We employ a stochastic expectation-maximization algorithm to fit a logistic regression model that includes these explanatory variables as well as a latent stochastic blockmodel component and additional node-specific effects. Although maximum-likelihood estimates do not appear consistent in this context, we are able to evaluate confidence sets as a function of different blockmodel partitions, which enables us to qualitatively assess the significance of estimated residual network structure relative to a baseline, which models covariates but lacks block structure.


$\theta$-MRF: Capturing Spatial and Semantic Structure in the Parameters for Scene Understanding

Neural Information Processing Systems

For most scene understanding tasks (such as object detection or depth estimation), the classifiers need to consider contextual information in addition to the local features. We can capture such contextual information by taking as input the features/attributes from all the regions in the image. However, this contextual dependence also varies with the spatial location of the region of interest, and we therefore need a different set of parameters for each spatial location. This results in a very large number of parameters. In this work, we model the independence properties between the parameters for each location and for each task, by defining a Markov Random Field (MRF) over the parameters. In particular, two sets of parameters are encouraged to have similar values if they are spatially close or semantically close. Our method is, in principle, complementary to other ways of capturing context such as the ones that use a graphical model over the labels instead. In extensive evaluation over two different settings, of multi-class object detection and of multiple scene understanding tasks (scene categorization, depth estimation, geometric labeling), our method beats the state-of-the-art methods in all the four tasks.


High-dimensional regression with noisy and missing data: Provable guarantees with non-convexity

Neural Information Processing Systems

Although the standard formulations of prediction problems involve fully-observed and noiseless data drawn in an i.i.d. manner, many applications involve noisy and/or missing data, possibly involving dependencies. We study these issues in the context of high-dimensional sparse linear regression, and propose novel estimators for the cases of noisy, missing, and/or dependent data. Many standard approaches to noisy or missing data, such as those using the EM algorithm, lead to optimization problems that are inherently non-convex, and it is difficult to establish theoretical guarantees on practical algorithms. While our approach also involves optimizing non-convex programs, we are able to both analyze the statistical error associated with any global optimum, and prove that a simple projected gradient descent algorithm will converge in polynomial time to a small neighborhood of the set of global minimizers. On the statistical side, we provide non-asymptotic bounds that hold with high probability for the cases of noisy, missing, and/or dependent data. On the computational side, we prove that under the same types of conditions required for statistical consistency, the projected gradient descent algorithm will converge at geometric rates to a near-global minimizer. We illustrate these theoretical predictions with simulations, showing agreement with the predicted scalings.


Continuous-Time Regression Models for Longitudinal Networks

Neural Information Processing Systems

The development of statistical models for continuous-time longitudinal network data is of increasing interest in machine learning and social science. Leveraging ideas from survival and event history analysis, we introduce a continuous-time regression modeling framework for network event data that can incorporate both time-dependent network statistics and time-varying regression coefficients. We also develop an efficient inference scheme that allows our approach to scale to large networks. On synthetic and real-world data, empirical results demonstrate that the proposed inference approach can accurately estimate the coefficients of the regression model, which is useful for interpreting the evolution of the network; furthermore, the learned model has systematically better predictive performance compared to standard baseline methods.