Regression
Boosted Stochastic Frank-Wolfe for Constrained Nonconvex Optimization
Nandhan, Navil, Khademi, Abbas, Silveti-Falls, Antonio
The boosted Frank-Wolfe algorithm accelerates the classical Frank-Wolfe algorithm by better aligning the update direction with the negative gradient. Its analysis, however, has been limited to deterministic convex problems, with step sizes that require either line search or knowledge of the Lipschitz constant of the gradient. We develop a novel step size strategy that does not depend on the Lipschitz constant of the gradient, which allows us to extend the boosted Frank-Wolfe algorithm to the stochastic setting. We prove that boosting with this step size strategy can be combined with many modern gradient estimators, including SAGA, L-SVRG, SAG, Heavy Ball momentum, and zeroth-order estimators, among others, while retaining the worst-case convergence rates of ordinary stochastic Frank-Wolfe. Our analysis also yields the first convergence rates for boosted Frank-Wolfe on nonconvex and quasar-convex objectives, results which are new even for deterministic problems. Experiments on sparse logistic regression and quantum process tomography show that stochastic boosted Frank-Wolfe achieves faster convergence per gradient oracle call (and on wall-clock) compared to the non-boosted baseline.
Semi-Parametric Bayesian Additive Regression Trees for Risk Prediction with High-Dimensional Epigenetic Signatures and Low-Dimensional Covariates
Bhandari, Saurabh, Bhatti, Parveen, Chiu, Brian C. -H., Ji, Yuan
In the era of precision medicine, genome-wide epigenetic modifications offer rich data that could inform risk prediction. However, these data are high-dimensional and exhibit complex dependence structures, which makes it difficult to jointly model them with low-dimensional covariates when the goal is to obtain interpretable effect estimates for covariate adjustment. Standard Bayesian additive regression trees (BART) provide strong predictive performance but treat all predictors uniformly within the tree ensemble, obscuring the contributions of significant covariates and complicating variable selection in high-dimensional settings. We propose a semi-parametric BART model (spBART) that addresses this limitation by modeling low-dimensional covariates through a parametric component with interpretable coefficients, while capturing complex nonlinear associations among high-dimensional predictors through the tree ensemble. To perform stable variable selection, we develop a cross-validation-based procedure that aggregates posterior inclusion probabilities across folds and applies Bayesian false discovery rate control. We apply the proposed method to a pooled case--control analysis of high-dimensional genome-wide 5-hydroxymethylcytosine profiles derived from circulating cell-free DNA in two multiple myeloma studies ($N = 869$). The approach identifies a parsimonious set of candidate loci and achieves strong out-of-sample discrimination (AUC $= 0.96$) in a held-out validation set. Overall, spBART provides a unified framework for combining interpretable covariate inference with flexible modeling and variable selection in high-dimensional biomedical studies.
CASCADE Conformal Prediction: Uncertainty-Adaptive Prediction Intervals for Two-Stage Clinical Decision Support
Diaz-Rincon, Ricardo, Liang, Muxuan, Ramirez-Zamora, Adolfo, Shickel, Benjamin
Effective medication management in Parkinson's Disease (PD) is challenging due to heterogeneous disease progression, variable patient response, and medication side effects. While AI models can forecast levodopa equivalent daily dose (LEDD) as a measure of medication needs, standard uncertainty quantification often fails to communicate the reliability of these predictions, treating high and low confidence clinical decisions identically. We introduce CASCADE (Calibrated Adaptive Scaling via Conformal And Distributional Estimation), a novel conformal prediction framework that propagates epistemic uncertainty from a screening classifier to adapt downstream predictions. Unlike standard conformal methods that rely on auxiliary residual regression, we leverage epistemic uncertainty from a primary classification task (identifying whether a medication change is needed) to dynamically scale the prediction intervals of a secondary regression task (predicting how much change). By mapping Venn-Abers multi-probabilistic uncertainty directly to non-conformity scores, our framework achieves continuous risk adaptation. We demonstrate that this ``cascade effect'' produces highly efficient intervals for confident patients (38.9% narrower than standard conformal baselines) while automatically expanding intervals to ensure robust coverage for uncertain cases, bridging the gap between discrete clinical decision-making and continuous dose forecasting in PD.
Large-Step Training Dynamics of a Two-Factor Linear Transformer Model
Gradient-flow analyses show that simplified linear transformers can learn the in-context linear-regression algorithm, but they do not explain the finite-step behavior of gradient descent at large learning rates. Motivated by empirical work on high-learning-rate transformer instabilities and by the cubic-map phase diagram for quadratic regression, we study an exactly reducible one-prompt linear-transformer training problem. After normalization, the dynamics reduce to a two-factor product map with an effective step-size parameter \(μ\). On the balanced slice, this map recovers the known scalar cubic transition from monotone convergence to catapult convergence, periodic and chaotic bounded nonconvergence, and divergence. We then analyze the full two-dimensional system and show that, for \(0<μ<2\), it has an explicit invariant Chebyshev ellipse separating forward-invariant regions; this ellipse carries off-balanced chaotic dynamics but is transversely repelling, while balanced scalar attractors can be transversely attracting. These results show that large constant learning rates can change the training attractor of the learned transformer rather than merely accelerating convergence: beyond sharp stability thresholds, finite-step training may settle into cycles, bounded chaos, or divergence instead of a single in-context linear-regression solution. We also discuss the consequences for mini-batch gradient descent based training methods.
Learning Interpretable Point-Based Clinical Risk Scores via Direct Optimization
Cui, Ying, Li, Albert M, Charu, Vivek, Hwang, Yeon-Mi, Hernandez-Boussard, Tina, Tian, Lu
Many clinical risk scores are deployed as additive rules with nonnegative integer points assigned to relevant binary predictive features. These integer weights not only make the score easier to use in practice but also promote sparsity in the resulting prediction model. Such risk scores are often derived by first fitting a regression model and then rounding the estimated coefficients to the nearest integer after appropriate scaling. This approach is computationally fast but does not guarantee optimality of the resulting score. Alternatively, one may search over all possible integer weights to directly optimize a value function by posing the problem as an integer programming task. However, the associated computational burden can be substantial, especially when the value function is nonconcave or even discontinuous. In this paper, we develop new machine learning algorithms that employ a flexible greedy optimization strategy to learn such additive scoring directly under explicit and sensible optimality objectives. We apply the proposed method to a large electronic health record (EHR) cohort in Epic Cosmos to construct an integer-weighted comorbidity score for measuring the risk of post-discharge mortality. We also conduct a simulation study to examine the finite-sample operating characteristics.
The Thermodynamic Costs of Simple Linear Regression
D'Ambrosia, Samuel H., Daniels, Sultan M., DeWeese, Michael R., Sahai, Anant
The construction of models from data is a significant contributor to the energetic costs of computation. Because of this, understanding how foundational thermodynamic bounds apply to modeling algorithms will be increasingly important. Here, we study the thermodynamic costs of a basic and fundamental modeling algorithm: simple linear regression. Following Landauer, we approximate the thermodynamic lower bound on irreversibly performing both exact linear regression and linear regression via stochastic gradient descent as implemented on floating-point numbers. From this, we derive energycost aware scaling laws for the optimal dataset size for training a linear regression model given a generalization error dependent demand for inference. Additionally, we discuss a method to lower bound the entropy production from the mismatch cost for algorithms with continuous input variables.
Posterior Contraction of Lévy Adaptive B-spline Regression in Besov Spaces
Oh, Jeunghun, Park, Sewon, Lee, Jaeyong
We investigate the asymptotic properties of the Lévy Adaptive B-spline (LABS) regression model, a Bayesian nonparametric method that incorporates B-spline kernels into the Lévy Adaptive Regression Kernel (LARK) model. LABS applies splines of varying degrees with independently defined knots, yielding a flexible model class capable of adapting to irregular and locally structured features of the true function. Within the nonparametric regression framework with univariate random design and Gaussian errors, we establish that the LABS posterior contracts around the true function in Besov classes at nearly minimax-optimal rates, up to a logarithmic factor, while adapting automatically to unknown smoothness. This study contributes to filling a gap in the literature, where theoretical results on posterior contraction of the LARK model in Besov spaces remain scarce. Simulation experiments on standard test functions in Besov spaces, including Blocks, Bumps, HeaviSine, and Doppler, complement the theoretical results and demonstrate the practical utility of LABS.
Multi-task Linear Regression without Eigenvalue Lower Bounds: Adaptivity, Robustness and Safety
We study the multi-task linear regression problem in the presence of contaminated tasks. We address the setting where the unknown parameters of a majority of tasks are close in the $\ell_2$-norm, while a fraction of tasks are arbitrary outliers. Existing theoretical frameworks for this problem rely heavily on the assumption that the empirical second moment of each task has a minimum eigenvalue bounded away from zero (order $Ω(1)$). Crucially, this assumption fails in many high-dimensional scenarios, rendering prior guarantees vacuous. To overcome this limitation, we propose an estimator based on matrix-weighted norm regularization. We also introduce a relative balancedness condition, quantified by a balancedness constant, that compares each task's second moment with the average inlier geometry and relaxes the need for taskwise second-moment lower bounds. In favorable regimes with moderate balancedness, our prediction MSE bounds match the rate of Duan and Wang (2023) under substantially weaker spectral assumptions; the resulting task-overall MSE is minimax optimal up to logarithmic factors. Furthermore, we demonstrate that our estimator enjoys a safety guarantee: when the relevant balancedness constant is large or infinite, or when tasks are unrelated, the method performs no worse than independent task learning. Consequently, our methodology achieves simultaneous adaptivity to task similarity, robustness to outliers, and safety outside favorable transfer regimes.
On efficient robust regression with subquadratic samples
Adil, Deeksha, Błasiok, Jarosław, Chen, Hongjie, Sridharan, Deepak Narayanan
We revisit the problem of robust linear regression under Gaussian covariates with an unknown covariance matrix of condition number $κ$. For this fundamental problem, significant gaps remain in our understanding of the trade-offs among sample complexity, condition number, runtime, and prediction error for efficient algorithms. Our first result is a near-linear-time algorithm that uses $\widetilde{O}(d/ε^4)$ samples, where $d$ is the dimension and $ε$ is the corruption rate, and achieves prediction error $O(\sqrt{εκ})$ under the condition $εκ\lesssim 1$, improving over all prior works. We complement this result with a Statistical Query (SQ) lower bound showing that efficient SQ algorithms achieving error $o(\sqrt{εκ})$ when $εκ\lesssim 1$ require queries that take $Ω(d^2)$ samples to simulate. Finally, we prove a low-degree polynomial lower bound that gives fine-grained evidence that, without assumptions such as $εκ\lesssim 1$, efficient algorithms may require $\tildeΩ\left(\min\{dε^{2}κ^{2},\ ε^{2}d^{2}\}\right)$ samples to significantly outperform the trivial estimator that always guesses $0$.
Statistical Limits and Efficient Algorithms for Differentially Private Federated Learning
Auddy, Arnab, Peng, Xiangni, Paul, Subhadeep
Federated Learning is a leading framework for training ML and AI models collaboratively across numerous user devices or databases. We study the trade-offs among estimation accuracy, privacy constraints, and communication cost for differentially private (DP) federated M estimation. The two standard methods in the literature are FedAvg, which may suffer from high federation bias, and FedSGD, which can incur high communication cost. Aimed at improving accuracy at a reduced communication cost, we propose FedHybrid, which uses FedSGD starting with an improved initialization by the FedAvg estimator. We propose FedNewton, which averages local Newton iterations to reduce bias in FedAvg, achieving an estimation accuracy comparable to FedSGD with much fewer communication rounds when the number of clients grows sufficiently slowly. We establish finite sample upper bounds on the mean-squared error rates of the DP versions of these estimators as functions of the number of clients, local sample sizes, privacy budget, and number of iterations. We further derive a minimax lower bound on the MSE of any iterative private federated procedure that provides a benchmark to assess the optimality gap of these methods. We numerically evaluate our methods for training a logistic regression and a neural network on the computer vision datasets MNIST and CIFAR-10.