Regression
Multivariate Probabilistic Regression with Natural Gradient Boosting
O'Malley, Michael, Sykulski, Adam M., Lumpkin, Rick, Schuler, Alejandro
Many single-target regression problems require estimates of uncertainty along with the point predictions. Probabilistic regression algorithms are well-suited for these tasks. However, the options are much more limited when the prediction target is multivariate and a joint measure of uncertainty is required. For example, in predicting a 2D velocity vector a joint uncertainty would quantify the probability of any vector in the plane, which would be more expressive than two separate uncertainties on the x- and y- components. To enable joint probabilistic regression, we propose a Natural Gradient Boosting (NGBoost) approach based on nonparametrically modeling the conditional parameters of the multivariate predictive distribution. Our method is robust, works out-of-the-box without extensive tuning, is modular with respect to the assumed target distribution, and performs competitively in comparison to existing approaches. We demonstrate these claims in simulation and with a case study predicting two-dimensional oceanographic velocity data. An implementation of our method is available at https://github.com/stanfordmlgroup/ngboost.
Learning a performance metric of Buchberger's algorithm
Mojsiloviฤ, Jelena, Peifer, Dylan, Petroviฤ, Sonja
What can be (machine) learned about the complexity of Buchberger's algorithm? Given a system of polynomials, Buchberger's algorithm computes a Gr\"obner basis of the ideal these polynomials generate using an iterative procedure based on multivariate long division. The runtime of each step of the algorithm is typically dominated by a series of polynomial additions, and the total number of these additions is a hardware independent performance metric that is often used to evaluate and optimize various implementation choices. In this work we attempt to predict, using just the starting input, the number of polynomial additions that take place during one run of Buchberger's algorithm. Good predictions are useful for quickly estimating difficulty and understanding what features make Gr\"obner basis computation hard. Our features and methods could also be used for value models in the reinforcement learning approach to optimize Buchberger's algorithm introduced in [Peifer, Stillman, and Halpern-Leistner, 2020]. We show that a multiple linear regression model built from a set of easy-to-compute ideal generator statistics can predict the number of polynomial additions somewhat well, better than an uninformed model, and better than regression models built on some intuitive commutative algebra invariants that are more difficult to compute. We also train a simple recursive neural network that outperforms these linear models. Our work serves as a proof of concept, demonstrating that predicting the number of polynomial additions in Buchberger's algorithm is a feasible problem from the point of view of machine learning.
Parameter-free Statistically Consistent Interpolation: Dimension-independent Convergence Rates for Hilbert kernel regression
Mitra, Partha P, Sire, Clรฉment
Previously, statistical textbook wisdom has held that interpolating noisy data will generalize poorly, but recent work has shown that data interpolation schemes can generalize well. This could explain why overparameterized deep nets do not necessarily overfit. Optimal data interpolation schemes have been exhibited that achieve theoretical lower bounds for excess risk in any dimension for large data (Statistically Consistent Interpolation). These are non-parametric Nadaraya-Watson estimators with singular kernels. The recently proposed weighted interpolating nearest neighbors method (wiNN) is in this class, as is the previously studied Hilbert kernel interpolation scheme, in which the estimator has the form $\hat{f}(x)=\sum_i y_i w_i(x)$, where $w_i(x)= \|x-x_i\|^{-d}/\sum_j \|x-x_j\|^{-d}$. This estimator is unique in being completely parameter-free. While statistical consistency was previously proven, convergence rates were not established. Here, we comprehensively study the finite sample properties of Hilbert kernel regression. We prove that the excess risk is asymptotically equivalent pointwise to $\sigma^2(x)/\ln(n)$ where $\sigma^2(x)$ is the noise variance. We show that the excess risk of the plugin classifier is less than $2|f(x)-1/2|^{1-\alpha}\,(1+\varepsilon)^\alpha \sigma^\alpha(x)(\ln(n))^{-\frac{\alpha}{2}}$, for any $0<\alpha<1$, where $f$ is the regression function $x\mapsto\mathbb{E}[y|x]$. We derive asymptotic equivalents of the moments of the weight functions $w_i(x)$ for large $n$, for instance for $\beta>1$, $\mathbb{E}[w_i^{\beta}(x)]\sim_{n\rightarrow \infty}((\beta-1)n\ln(n))^{-1}$. We derive an asymptotic equivalent for the Lagrange function and exhibit the nontrivial extrapolation properties of this estimator. We present heuristic arguments for a universal $w^{-2}$ power-law behavior of the probability density of the weights in the large $n$ limit.
Semi-Supervised Statistical Inference for High-Dimensional Linear Regression with Blockwise Missing Data
Xue, Fei, Ma, Rong, Li, Hongzhe
Blockwise missing data occurs frequently when we integrate multisource or multimodality data where different sources or modalities contain complementary information. In this paper, we consider a high-dimensional linear regression model with blockwise missing covariates and a partially observed response variable. Under this semi-supervised framework, we propose a computationally efficient estimator for the regression coefficient vector based on carefully constructed unbiased estimating equations and a multiple blockwise imputation procedure, and obtain its rates of convergence. Furthermore, building upon an innovative semi-supervised projected estimating equation technique that intrinsically achieves bias-correction of the initial estimator, we propose nearly unbiased estimators for the individual regression coefficients that are asymptotically normally distributed under mild conditions. By carefully analyzing these debiased estimators, asymptotically valid confidence intervals and statistical tests about each regression coefficient are constructed. Numerical studies and application analysis of the Alzheimer's Disease Neuroimaging Initiative data show that the proposed method performs better and benefits more from unsupervised samples than existing methods.
Towards an Understanding of Benign Overfitting in Neural Networks
Li, Zhu, Zhou, Zhi-Hua, Gretton, Arthur
Modern machine learning models often employ a huge number of parameters and are typically optimized to have zero training loss; yet surprisingly, they possess near-optimal prediction performance, contradicting classical learning theory. We examine how these benign overfitting phenomena occur in a two-layer neural network setting where sample covariates are corrupted with noise. We address the high dimensional regime, where the data dimension $d$ grows with the number $n$ of data points. Our analysis combines an upper bound on the bias with matching upper and lower bounds on the variance of the interpolator (an estimator that interpolates the data). These results indicate that the excess learning risk of the interpolator decays under mild conditions. We further show that it is possible for the two-layer ReLU network interpolator to achieve a near minimax-optimal learning rate, which to our knowledge is the first generalization result for such networks. Finally, our theory predicts that the excess learning risk starts to increase once the number of parameters $s$ grows beyond $O(n^2)$, matching recent empirical findings.
The Fine-Grained Hardness of Sparse Linear Regression
Gupte, Aparna, Vaikuntanathan, Vinod
Sparse linear regression is the well-studied inference problem where one is given a design matrix $\mathbf{A} \in \mathbb{R}^{M\times N}$ and a response vector $\mathbf{b} \in \mathbb{R}^M$, and the goal is to find a solution $\mathbf{x} \in \mathbb{R}^{N}$ which is $k$-sparse (that is, it has at most $k$ non-zero coordinates) and minimizes the prediction error $||\mathbf{A} \mathbf{x} - \mathbf{b}||_2$. On the one hand, the problem is known to be $\mathcal{NP}$-hard which tells us that no polynomial-time algorithm exists unless $\mathcal{P} = \mathcal{NP}$. On the other hand, the best known algorithms for the problem do a brute-force search among $N^k$ possibilities. In this work, we show that there are no better-than-brute-force algorithms, assuming any one of a variety of popular conjectures including the weighted $k$-clique conjecture from the area of fine-grained complexity, or the hardness of the closest vector problem from the geometry of numbers. We also show the impossibility of better-than-brute-force algorithms when the prediction error is measured in other $\ell_p$ norms, assuming the strong exponential-time hypothesis.
How to Build your First Machine Learning Model in Python
So what machine learning model are we building today? In this article, we are going to be building a regression model using the random forest algorithm on the solubility dataset. After model building, we are going to apply the model to make predictions followed by model performance evaluation and data visualization of its results. So which dataset are we going to use? The default answer may be to use a toy dataset as an example such as the Iris dataset (classification) or the Boston housing dataset (regression).
Evaluation of Local Model-Agnostic Explanations Using Ground Truth
Rahnama, Amir Hossein Akhavan, Butepage, Judith, Geurts, Pierre, Bostrom, Henrik
Explanation techniques are commonly evaluated using human-grounded methods, limiting the possibilities for large-scale evaluations and rapid progress in the development of new techniques. We propose a functionally-grounded evaluation procedure for local model-agnostic explanation techniques. In our approach, we generate ground truth for explanations when the black-box model is Logistic Regression and Gaussian Naive Bayes and compare how similar each explanation is to the extracted ground truth. In our empirical study, explanations of Local Interpretable Model-agnostic Explanations (LIME), SHapley Additive exPlanations (SHAP), and Local Permutation Importance (LPI) are compared in terms of how similar they are to the extracted ground truth. In the case of Logistic Regression, we find that the performance of the explanation techniques is highly dependent on the normalization of the data. In contrast, Local Permutation Importance outperforms the other techniques on Naive Bayes, irrespective of normalization. We hope that this work lays the foundation for further research into functionally-grounded evaluation methods for explanation techniques.
Adiabatic Quantum Feature Selection for Sparse Linear Regression
Desu, Surya Sai Teja, Srijith, P. K., Rao, M. V. Panduranga, Sivadasan, Naveen
Linear regression is a popular machine learning approach to learn and predict real valued outputs or dependent variables from independent variables or features. In many real world problems, its beneficial to perform sparse linear regression to identify important features helpful in predicting the dependent variable. It not only helps in getting interpretable results but also avoids overfitting when the number of features is large, and the amount of data is small. The most natural way to achieve this is by using `best subset selection' which penalizes non-zero model parameters by adding $\ell_0$ norm over parameters to the least squares loss. However, this makes the objective function non-convex and intractable even for a small number of features. This paper aims to address the intractability of sparse linear regression with $\ell_0$ norm using adiabatic quantum computing, a quantum computing paradigm that is particularly useful for solving optimization problems faster. We formulate the $\ell_0$ optimization problem as a Quadratic Unconstrained Binary Optimization (QUBO) problem and solve it using the D-Wave adiabatic quantum computer. We study and compare the quality of QUBO solution on synthetic and real world datasets. The results demonstrate the effectiveness of the proposed adiabatic quantum computing approach in finding the optimal solution. The QUBO solution matches the optimal solution for a wide range of sparsity penalty values across the datasets.
Model-agnostic and Scalable Counterfactual Explanations via Reinforcement Learning
Samoilescu, Robert-Florian, Van Looveren, Arnaud, Klaise, Janis
Counterfactual instances are a powerful tool to obtain valuable insights into automated decision processes, describing the necessary minimal changes in the input space to alter the prediction towards a desired target. Most previous approaches require a separate, computationally expensive optimization procedure per instance, making them impractical for both large amounts of data and high-dimensional data. Moreover, these methods are often restricted to certain subclasses of machine learning models (e.g. differentiable or tree-based models). In this work, we propose a deep reinforcement learning approach that transforms the optimization procedure into an end-to-end learnable process, allowing us to generate batches of counterfactual instances in a single forward pass. Our experiments on real-world data show that our method i) is model-agnostic (does not assume differentiability), relying only on feedback from model predictions; ii) allows for generating target-conditional counterfactual instances; iii) allows for flexible feature range constraints for numerical and categorical attributes, including the immutability of protected features (e.g. gender, race); iv) is easily extended to other data modalities such as images.