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 Discriminant Analysis


Robust Feature-Sample Linear Discriminant Analysis for Brain Disorders Diagnosis

Neural Information Processing Systems

A wide spectrum of discriminative methods is increasingly used in diverse applications for classification or regression tasks. However, many existing discriminative methods assume that the input data is nearly noise-free, which limits their applications to solve real-world problems. Particularly for disease diagnosis, the data acquired by the neuroimaging devices are always prone to different sources of noise. Robust discriminative models are somewhat scarce and only a few attempts have been made to make them robust against noise or outliers. These methods focus on detecting either the sample-outliers or feature-noises. Moreover, they usually use unsupervised de-noising procedures, or separately de-noise the training and the testing data. All these factors may induce biases in the learning process, and thus limit its performance. In this paper, we propose a classification method based on the least-squares formulation of linear discriminant analysis, which simultaneously detects the sample-outliers and feature-noises. The proposed method operates under a semi-supervised setting, in which both labeled training and unlabeled testing data are incorporated to form the intrinsic geometry of the sample space. Therefore, the violating samples or feature values are identified as sample-outliers or feature-noises, respectively. We test our algorithm on one synthetic and two brain neurodegenerative databases (particularly for Parkinson's disease and Alzheimer's disease). The results demonstrate that our method outperforms all baseline and state-of-the-art methods, in terms of both accuracy and the area under the ROC curve.


Sparse Fisher's Linear Discriminant Analysis for Partially Labeled Data

arXiv.org Machine Learning

Classification is an important tool with many useful applications. Among the many classification methods, Fisher's Linear Discriminant Analysis (LDA) is a traditional model-based approach which makes use of the covariance information. However, in the high-dimensional, low-sample size setting, LDA cannot be directly deployed because the sample covariance is not invertible. While there are modern methods designed to deal with high-dimensional data, they may not fully use the covariance information as LDA does. Hence in some situations, it is still desirable to use a model-based method such as LDA for classification. This article exploits the potential of LDA in more complicated data settings. In many real applications, it is costly to manually place labels on observations; hence it is often that only a small portion of labeled data is available while a large number of observations are left without a label. It is a great challenge to obtain good classification performance through the labeled data alone, especially when the dimension is greater than the size of the labeled data. In order to overcome this issue, we propose a semi-supervised sparse LDA classifier to take advantage of the seemingly useless unlabeled data. They provide additional information which helps to boost the classification performance in some situations. A direct estimation method is used to reconstruct LDA and achieve the sparsity; meanwhile we employ the difference-convex algorithm to handle the non-convex loss function associated with the unlabeled data. Theoretical properties of the proposed classifier are studied. Our simulated examples help to understand when and how the information extracted from the unlabeled data can be useful. A real data example further illustrates the usefulness of the proposed method.


On the Equivalence of Linear Discriminant Analysis and Least Squares

AAAI Conferences

Linear discriminant analysis (LDA) is a popular dimensionality reduction and classification method that simultaneously maximizes between-class scatter and minimizes within-class scatter. In this paper, we verify the equivalence of LDA and least squares (LS) with a set of dependent variable matrices. The equivalence is in the sense that the LDA solution matrix and the LS solution matrix have the same range. The resulting LS provides an intuitive interpretation in which its solution performs data clustering according to class labels. Further, the fact that LDA and LS have the same range allows us to design a two-stage algorithm that computes the LDA solution given by generalized eigenvalue decomposition (GEVD), much faster than computing the original GEVD. Experimental results demonstrate the equivalence of the LDA solution and the proposed LS solution.


Exploring Sparsity in Multi-class Linear Discriminant Analysis

arXiv.org Machine Learning

Recent studies in the literature have paid much attention to the sparsity in linear classification tasks. One motivation of imposing sparsity assumption on the linear discriminant direction is to rule out the noninformative features, making hardly contribution to the classification problem. Most of those work were focused on the scenarios of binary classification, such as Fan et al. (2012), Cai and Liu (2011) and Mai et al. (2012). In the presence of multi-class data, preceding researches recommended individually pairwise sparse linear discriminant analysis(LDA), such as Cai and Liu(2011),Fan et al.(2012). However, further sparsity should be explored. In this paper, an estimator of grouped LASSO type is proposed to take advantage of sparsity for multi-class data. It enjoys appealing non-asymptotic properties which allows insignificant correlations among features. This estimator exhibits superior capability on both simulated and real data.


Worst-Case Linear Discriminant Analysis as Scalable Semidefinite Feasibility Problems

arXiv.org Artificial Intelligence

In this paper, we propose an efficient semidefinite programming (SDP) approach to worst-case linear discriminant analysis (WLDA). Compared with the traditional LDA, WLDA considers the dimensionality reduction problem from the worst-case viewpoint, which is in general more robust for classification. However, the original problem of WLDA is non-convex and difficult to optimize. In this paper, we reformulate the optimization problem of WLDA into a sequence of semidefinite feasibility problems. To efficiently solve the semidefinite feasibility problems, we design a new scalable optimization method with quasi-Newton methods and eigen-decomposition being the core components. The proposed method is orders of magnitude faster than standard interior-point based SDP solvers. Experiments on a variety of classification problems demonstrate that our approach achieves better performance than standard LDA. Our method is also much faster and more scalable than standard interior-point SDP solvers based WLDA. The computational complexity for an SDP with $m$ constraints and matrices of size $d$ by $d$ is roughly reduced from $\mathcal{O}(m^3+md^3+m^2d^2)$ to $\mathcal{O}(d^3)$ ($m>d$ in our case).


Implicitly Constrained Semi-Supervised Linear Discriminant Analysis

arXiv.org Machine Learning

Abstract--Semi-supervised learning is an important and active topic of research in pattern recognition. For classification using linear discriminant analysis specifically, several semi-supervised variants have been proposed. Using any one of these methods is not guaranteed to outperform the supervised classifier which does not take the additional unlabeled data into account. In this work we compare traditional Expectation Maximization type approaches for semi-supervised linear discriminant analysis with approaches based on intrinsic constraints and propose a new principled approach for semi-supervised linear discriminant analysis, using so-called implicit constraints. We explore the relationships between these methods and consider the question if and in what sense we can expect improvement in performance over the supervised procedure. The constraint based approaches are more robust to misspecification of the model, and may outperform alternatives that make more assumptions on the data in terms of the log-likelihood of unseen objects. In many real-world pattern recognition tasks, obtaining labeled examples to train classification algorithms is much more expensive than obtaining unlabeled examples.


Pairwise-Covariance Linear Discriminant Analysis

AAAI Conferences

In machine learning, linear discriminant analysis (LDA) is a popular dimension reduction method. In this paper, we first provide a new perspective of LDA from an information theory perspective. From this new perspective, we propose a new formulation of LDA, which uses the pairwise averaged class covariance instead of theglobally averaged class covariance used in standard LDA. This pairwise (averaged) covariance describes data distribution more accurately. The new perspective also provides a natural way to properly weigh different pairwise distances, which emphasizes the pairs of class with small distances, and this leads to the proposed pairwise covariance properly weighted LDA (pcLDA). The kernel version of pcLDA is presented to handle nonlinear projections. Efficient algorithms are presented to efficiently compute the proposed models.


Learning ELM network weights using linear discriminant analysis

arXiv.org Machine Learning

We present an alternative to the pseudo-inverse method for determining the hidden to output weight values for Extreme Learning Machines performing classification tasks. The method is based on linear discriminant analysis and provides Bayes optimal single point estimates for the weight values.


An Efficient Approach to Sparse Linear Discriminant Analysis

arXiv.org Machine Learning

We present a novel approach to the formulation and the resolution of sparse Linear Discriminant Analysis (LDA). Our proposal, is based on penalized Optimal Scoring. It has an exact equivalence with penalized LDA, contrary to the multi-class approaches based on the regression of class indicator that have been proposed so far. Sparsity is obtained thanks to a group-Lasso penalty that selects the same features in all discriminant directions. Our experiments demonstrate that this approach generates extremely parsimonious models without compromising prediction performances. Besides prediction, the resulting sparse discriminant directions are also amenable to low-dimensional representations of data. Our algorithm is highly efficient for medium to large number of variables, and is thus particularly well suited to the analysis of gene expression data.


Communications Inspired Linear Discriminant Analysis

arXiv.org Machine Learning

We study the problem of supervised linear dimensionality reduction, taking an information-theoretic viewpoint. The linear projection matrix is designed by maximizing the mutual information between the projected signal and the class label (based on a Shannon entropy measure). By harnessing a recent theoretical result on the gradient of mutual information, the above optimization problem can be solved directly using gradient descent, without requiring simplification of the objective function. Theoretical analysis and empirical comparison are made between the proposed method and two closely related methods (Linear Discriminant Analysis and Information Discriminant Analysis), and comparisons are also made with a method in which Renyi entropy is used to define the mutual information (in this case the gradient may be computed simply, under a special parameter setting). Relative to these alternative approaches, the proposed method achieves promising results on real datasets.