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 Performance Analysis


Learning Image Descriptors with the Boosting-Trick

Neural Information Processing Systems

In this paper we apply boosting to learn complex non-linear local visual feature representations, drawing inspiration from its successful application to visual object detection. The main goal of local feature descriptors is to distinctively represent a salient image region while remaining invariant to viewpoint and illumination changes. This representation can be improved using machine learning, however, past approaches have been mostly limited to learning linear feature mappings in either the original input or a kernelized input feature space. While kernelized methods have proven somewhat effective for learning non-linear local feature descriptors, they rely heavily on the choice of an appropriate kernel function whose selection is often difficult and non-intuitive. We propose to use the boosting-trick to obtain a non-linear mapping of the input to a high-dimensional feature space. The non-linear feature mapping obtained with the boosting-trick is highly intuitive. We employ gradient-based weak learners resulting in a learned descriptor that closely resembles the well-known SIFT. As demonstrated in our experiments, the resulting descriptor can be learned directly from intensity patches achieving state-of-the-art performance.


Learning Kernels Using Local Rademacher Complexity

Neural Information Processing Systems

We use the notion of local Rademacher complexity to design new algorithms for learning kernels. Our algorithms thereby benefit from the sharper learning bounds based on that notion which, under certain general conditions, guarantee a faster convergence rate. We devise two new learning kernel algorithms: one based on a convex optimization problem for which we give an efficient solution using existing learning kernel techniques, and another one that can be formulated as a DC-programming problem for which we describe a solution in detail. We also report the results of experiments with both algorithms in both binary and multi-class classification tasks.


Transferring BCI models from calibration to control: Observing shifts in EEG features

arXiv.org Artificial Intelligence

Public Motor Imagery-based brain-computer interface (BCI) datasets are being used to develop increasingly good classifiers. However, they usually follow discrete paradigms where participants perform Motor Imagery at regularly timed intervals. It is often unclear what changes may happen in the EEG patterns when users attempt to perform a control task with such a BCI. This may lead to generalisation errors. We demonstrate a new paradigm containing a standard calibration session and a novel BCI control session based on EMG. This allows us to observe similarities in sensorimotor rhythms, and observe the additional preparation effects introduced by the control paradigm. In the Movement Related Cortical Potentials we found large differences between the calibration and control sessions. We demonstrate a CSP-based Machine Learning model trained on the calibration data that can make surprisingly good predictions on the BCI-controlled driving data.


Attention-Enhanced Hybrid Feature Aggregation Network for 3D Brain Tumor Segmentation

arXiv.org Artificial Intelligence

Glioblastoma is a highly aggressive and malignant brain tumor type that requires early diagnosis and prompt intervention. Due to its heterogeneity in appearance, developing automated detection approaches is challenging. To address this challenge, Artificial Intelligence (AI)-driven approaches in healthcare have generated interest in efficiently diagnosing and evaluating brain tumors. The Brain Tumor Segmentation Challenge (BraTS) is a platform for developing and assessing automated techniques for tumor analysis using high-quality, clinically acquired MRI data. In our approach, we utilized a multi-scale, attention-guided and hybrid U-Net-shaped model -- GLIMS -- to perform 3D brain tumor segmentation in three regions: Enhancing Tumor (ET), Tumor Core (TC), and Whole Tumor (WT). The multi-scale feature extraction provides better contextual feature aggregation in high resolutions and the Swin Transformer blocks improve the global feature extraction at deeper levels of the model. The segmentation mask generation in the decoder branch is guided by the attention-refined features gathered from the encoder branch to enhance the important attributes. Moreover, hierarchical supervision is used to train the model efficiently. Our model's performance on the validation set resulted in 92.19, 87.75, and 83.18 Dice Scores and 89.09, 84.67, and 82.15 Lesion-wise Dice Scores in WT, TC, and ET, respectively. The code is publicly available at https://github.com/yaziciz/GLIMS.


Random Search as a Baseline for Sparse Neural Network Architecture Search

arXiv.org Artificial Intelligence

Overparameterized neural networks are loosely characterized as networks that have a very high fitting (or memorization) capacity with respect to their training data. Although capable of memorization of their training data, these networks intriguingly achieve very low test error close to their training error rates [1, 2]. Meanwhile, sparse neural networks have shown similar or better generalization performance than their dense counterparts while having higher parameter efficiency [3]. With increasing availability of hardware and software that support sparse computational operations [4, 5], there has been a growing interest in finding sparse sub-networks within large overparameterized models to either improve generalization performance or to gain computational efficiency at the same performance level [6, 7, 8, 3]. Earlier works on creating efficient sparse sub-networks include the now popular pruning technique [9]. These were motivated by the desire to achieve compute efficiency in resource constraint applications by finding smaller networks within a larger network space without losing task performance quality [10]. The original pruning technique involves fully training a larger network on some task, discarding the task-irrelevant connections, and then fine-tuning the remaining sparse sub-network on the task to achieve the a level of performance near that of the larger network. Connections were originally pruned based on loss Hessians [9, 11]. Later on, other techniques were proposed such as the removal of weak connections [12] based on weight value thresholds.


Towards the Reusability and Compositionality of Causal Representations

arXiv.org Artificial Intelligence

Causal Representation Learning (CRL) aims at identifying high-level causal factors and their relationships from high-dimensional observations, e.g., images. While most CRL works focus on learning causal representations in a single environment, in this work we instead propose a first step towards learning causal representations from temporal sequences of images that can be adapted in a new environment, or composed across multiple related environments. In particular, we introduce DECAF, a framework that detects which causal factors can be reused and which need to be adapted from previously learned causal representations. Our approach is based on the availability of intervention targets, that indicate which variables are perturbed at each time step. Experiments on three benchmark datasets show that integrating our framework with four state-of-the-art CRL approaches leads to accurate representations in a new environment with only a few samples.


Robust Subgraph Learning by Monitoring Early Training Representations

arXiv.org Artificial Intelligence

Graph neural networks (GNNs) have attracted significant attention for their outstanding performance in graph learning and node classification tasks. However, their vulnerability to adversarial attacks, particularly through susceptible nodes, poses a challenge in decision-making. The need for robust graph summarization is evident in adversarial challenges resulting from the propagation of attacks throughout the entire graph. In this paper, we address both performance and adversarial robustness in graph input by introducing the novel technique SHERD (Subgraph Learning Hale through Early Training Representation Distances). SHERD leverages information from layers of a partially trained graph convolutional network (GCN) to detect susceptible nodes during adversarial attacks using standard distance metrics. The method identifies "vulnerable (bad)" nodes and removes such nodes to form a robust subgraph while maintaining node classification performance. Through our experiments, we demonstrate the increased performance of SHERD in enhancing robustness by comparing the network's performance on original and subgraph inputs against various baselines alongside existing adversarial attacks. Our experiments across multiple datasets, including citation datasets such as Cora, Citeseer, and Pubmed, as well as microanatomical tissue structures of cell graphs in the placenta, highlight that SHERD not only achieves substantial improvement in robust performance but also outperforms several baselines in terms of node classification accuracy and computational complexity.


Uncertainty Quantification for cross-subject Motor Imagery classification

arXiv.org Artificial Intelligence

Uncertainty Quantification aims to determine when the prediction from a Machine Learning model is likely to be wrong. Computer Vision research has explored methods for determining epistemic uncertainty (also known as model uncertainty), which should correspond with generalisation error. These methods theoretically allow to predict misclassifications due to inter-subject variability. We applied a variety of Uncertainty Quantification methods to predict misclassifications for a Motor Imagery Brain Computer Interface. Deep Ensembles performed best, both in terms of classification performance and cross-subject Uncertainty Quantification performance. However, we found that standard CNNs with Softmax output performed better than some of the more advanced methods.


Standing on FURM ground -- A framework for evaluating Fair, Useful, and Reliable AI Models in healthcare systems

arXiv.org Artificial Intelligence

The impact of using artificial intelligence (AI) to guide patient care or operational processes is an interplay of the AI model's output, the decision-making protocol based on that output, and the capacity of the stakeholders involved to take the necessary subsequent action. Estimating the effects of this interplay before deployment, and studying it in real time afterwards, are essential to bridge the chasm between AI model development and achievable benefit. To accomplish this, the Data Science team at Stanford Health Care has developed a Testing and Evaluation (T&E) mechanism to identify fair, useful and reliable AI models (FURM) by conducting an ethical review to identify potential value mismatches, simulations to estimate usefulness, financial projections to assess sustainability, as well as analyses to determine IT feasibility, design a deployment strategy, and recommend a prospective monitoring and evaluation plan. We report on FURM assessments done to evaluate six AI guided solutions for potential adoption, spanning clinical and operational settings, each with the potential to impact from several dozen to tens of thousands of patients each year. We describe the assessment process, summarize the six assessments, and share our framework to enable others to conduct similar assessments. Of the six solutions we assessed, two have moved into a planning and implementation phase. Our novel contributions - usefulness estimates by simulation, financial projections to quantify sustainability, and a process to do ethical assessments - as well as their underlying methods and open source tools, are available for other healthcare systems to conduct actionable evaluations of candidate AI solutions.


Breast Cancer Classification Using Gradient Boosting Algorithms Focusing on Reducing the False Negative and SHAP for Explainability

arXiv.org Artificial Intelligence

Cancer is one of the diseases that kill the most women in the world, with breast cancer being responsible for the highest number of cancer cases and consequently deaths. However, it can be prevented by early detection and, consequently, early treatment. Any development for detection or perdition this kind of cancer is important for a better healthy life. Many studies focus on a model with high accuracy in cancer prediction, but sometimes accuracy alone may not always be a reliable metric. This study implies an investigative approach to studying the performance of different machine learning algorithms based on boosting to predict breast cancer focusing on the recall metric. Boosting machine learning algorithms has been proven to be an effective tool for detecting medical diseases. The dataset of the University of California, Irvine (UCI) repository has been utilized to train and test the model classifier that contains their attributes. The main objective of this study is to use state-of-the-art boosting algorithms such as AdaBoost, XGBoost, CatBoost and LightGBM to predict and diagnose breast cancer and to find the most effective metric regarding recall, ROC-AUC, and confusion matrix. Furthermore, our study is the first to use these four boosting algorithms with Optuna, a library for hyperparameter optimization, and the SHAP method to improve the interpretability of our model, which can be used as a support to identify and predict breast cancer. We were able to improve AUC or recall for all the models and reduce the False Negative for AdaBoost and LigthGBM the final AUC were more than 99.41\% for all models.