Performance Analysis
Unsupervised Learning Approach to Anomaly Detection in Gravitational Wave Data
Gravitational waves (GW), predicted by Einstein's General Theory of Relativity, provide a powerful probe of astrophysical phenomena and fundamental physics. In this work, we propose an unsupervised anomaly detection method using variational autoencoders (VAEs) to analyze GW time-series data. By training on noise-only data, the VAE accurately reconstructs noise inputs while failing to reconstruct anomalies, such as GW signals, which results in measurable spikes in the reconstruction error. The method was applied to data from the LIGO H1 and L1 detectors. Evaluation on testing datasets containing both noise and GW events demonstrated reliable detection, achieving an area under the ROC curve (AUC) of 0.89. This study introduces VAEs as a robust, unsupervised approach for identifying anomalies in GW data, which offers a scalable framework for detecting known and potentially new phenomena in physics.
RowDetr: End-to-End Row Detection Using Polynomials
Cheppally, Rahul Harsha, Sharda, Ajay
The application of autonomous robots in high-throughput phenotyping has experienced a significant surge in recent years, driven by the need for precision and efficiency in agricultural tasks [1]. These advanced robotic systems are transforming the field by automating the complex task of phenotyping with unparalleled accuracy. While autonomous solutions in agriculture have been explored for decades [2], recent advancements have pushed the boundaries of this technology, particularly in addressing challenges related to GPS-denied navigation in dense crop environments. For nearly two decades, GPS-based autonomy has been the cornerstone of agricultural robotics. Studies such as [3] and [4] have showcased the use of RTK and GPS-based systems to guide tractors and harvesters with high precision. The GPS coordinates of rows can either be determined during planting or estimated using systems like [5, 6], which provide accurate crop and row location data.
MANGO: Multimodal Acuity traNsformer for intelliGent ICU Outcomes
Zhang, Jiaqing, Contreras, Miguel, Bandyopadhyay, Sabyasachi, Davidson, Andrea, Sena, Jessica, Ren, Yuanfang, Guan, Ziyuan, Ozrazgat-Baslanti, Tezcan, Loftus, Tyler J., Nerella, Subhash, Bihorac, Azra, Rashidi, Parisa
Estimation of patient acuity in the Intensive Care Unit (ICU) is vital to ensure timely and appropriate interventions. Advances in artificial intelligence (AI) technologies have significantly improved the accuracy of acuity predictions. However, prior studies using machine learning for acuity prediction have predominantly relied on electronic health records (EHR) data, often overlooking other critical aspects of ICU stay, such as patient mobility, environmental factors, and facial cues indicating pain or agitation. To address this gap, we present MANGO: the Multimodal Acuity traNsformer for intelliGent ICU Outcomes, designed to enhance the prediction of patient acuity states, transitions, and the need for life-sustaining therapy. We collected a multimodal dataset ICU-Multimodal, incorporating four key modalities: EHR data, wearable sensor data, video of patient's facial cues, and ambient sensor data, which we utilized to train MANGO. The MANGO model employs a multimodal feature fusion network powered by Transformer masked self-attention method, enabling it to capture and learn complex interactions across these diverse data modalities even when some modalities are absent. Our results demonstrated that integrating multiple modalities significantly improved the model's ability to predict acuity status, transitions, and the need for life-sustaining therapy. The best-performing models achieved an area under the receiver operating characteristic curve (AUROC) of 0.76 (95% CI: 0.72-0.79)
Predicting Internet Connectivity in Schools: A Feasibility Study Leveraging Multi-modal Data and Location Encoders in Low-Resource Settings
Doerksen, Kelsey, Fibaek, Casper, Schneider, Rochelle, Kim, Do-Hyung, Tingzon, Isabelle
Internet connectivity in schools is critical to provide students with the digital literary skills necessary to compete in modern economies. In order for governments to effectively implement digital infrastructure development in schools, accurate internet connectivity information is required. However, traditional survey-based methods can exceed the financial and capacity limits of governments. Open-source Earth Observation (EO) datasets have unlocked our ability to observe and understand socio-economic conditions on Earth from space, and in combination with Machine Learning (ML), can provide the tools to circumvent costly ground-based survey methods to support infrastructure development. In this paper, we present our work on school internet connectivity prediction using EO and ML. We detail the creation of our multi-modal, freely-available satellite imagery and survey information dataset, leverage the latest geographically-aware location encoders, and introduce the first results of using the new European Space Agency phi-lab geographically-aware foundational model to predict internet connectivity in Botswana and Rwanda. We find that ML with EO and ground-based auxiliary data yields the best performance in both countries, for accuracy, F1 score, and False Positive rates, and highlight the challenges of internet connectivity prediction from space with a case study in Kigali, Rwanda. Our work showcases a practical approach to support data-driven digital infrastructure development in low-resource settings, leveraging freely available information, and provide cleaned and labelled datasets for future studies to the community through a unique collaboration between UNICEF and the European Space Agency phi-lab.
Edge AI-based Radio Frequency Fingerprinting for IoT Networks
Hussain, Ahmed Mohamed, Abughanam, Nada, Papadimitratos, Panos
The deployment of the Internet of Things (IoT) in smart cities and critical infrastructure has enhanced connectivity and real-time data exchange but introduced significant security challenges. While effective, cryptography can often be resource-intensive for small-footprint resource-constrained (i.e., IoT) devices. Radio Frequency Fingerprinting (RFF) offers a promising authentication alternative by using unique RF signal characteristics for device identification at the Physical (PHY)-layer, without resorting to cryptographic solutions. The challenge is two-fold: how to deploy such RFF in a large scale and for resource-constrained environments. Edge computing, processing data closer to its source, i.e., the wireless device, enables faster decision-making, reducing reliance on centralized cloud servers. Considering a modest edge device, we introduce two truly lightweight Edge AI-based RFF schemes tailored for resource-constrained devices. We implement two Deep Learning models, namely a Convolution Neural Network and a Transformer-Encoder, to extract complex features from the IQ samples, forming device-specific RF fingerprints. We convert the models to TensorFlow Lite and evaluate them on a Raspberry Pi, demonstrating the practicality of Edge deployment. Evaluations demonstrate the Transformer-Encoder outperforms the CNN in identifying unique transmitter features, achieving high accuracy (> 0.95) and ROC-AUC scores (> 0.90) while maintaining a compact model size of 73KB, appropriate for resource-constrained devices.
A Review of Fairness and A Practical Guide to Selecting Context-Appropriate Fairness Metrics in Machine Learning
Barr, Caleb J. S., Erdelyi, Olivia, Docherty, Paul D., Grace, Randolph C.
Recent regulatory proposals for artificial intelligence emphasize fairness requirements for machine learning models. However, precisely defining the appropriate measure of fairness is challenging due to philosophical, cultural and political contexts. Biases can infiltrate machine learning models in complex ways depending on the model's context, rendering a single common metric of fairness insufficient. This ambiguity highlights the need for criteria to guide the selection of context-aware measures, an issue of increasing importance given the proliferation of ever tighter regulatory requirements. To address this, we developed a flowchart to guide the selection of contextually appropriate fairness measures. Twelve criteria were used to formulate the flowchart. This included consideration of model assessment criteria, model selection criteria, and data bias. We also review fairness literature in the context of machine learning and link it to core regulatory instruments to assist policymakers, AI developers, researchers, and other stakeholders in appropriately addressing fairness concerns and complying with relevant regulatory requirements.
Performance evaluation of predictive AI models to support medical decisions: Overview and guidance
Van Calster, Ben, Collins, Gary S., Vickers, Andrew J., Wynants, Laure, Kerr, Kathleen F., Barreรฑada, Lasai, Varoquaux, Gael, Singh, Karandeep, Moons, Karel G. M., Hernandez-boussard, Tina, Timmerman, Dirk, Mclernon, David J., Van Smeden, Maarten, Steyerberg, Ewout W.
A myriad of measures to illustrate performance of predictive artificial intelligence (AI) models have been proposed in the literature. Selecting appropriate performance measures is essential for predictive AI models that are developed to be used in medical practice, because poorly performing models may harm patients and lead to increased costs. We aim to assess the merits of classic and contemporary performance measures when validating predictive AI models for use in medical practice. We focus on models with a binary outcome. We discuss 32 performance measures covering five performance domains (discrimination, calibration, overall, classification, and clinical utility) along with accompanying graphical assessments. The first four domains cover statistical performance, the fifth domain covers decision-analytic performance. We explain why two key characteristics are important when selecting which performance measures to assess: (1) whether the measure's expected value is optimized when it is calculated using the correct probabilities (i.e., a "proper" measure), and (2) whether they reflect either purely statistical performance or decision-analytic performance by properly considering misclassification costs. Seventeen measures exhibit both characteristics, fourteen measures exhibited one characteristic, and one measure possessed neither characteristic (the F1 measure). All classification measures (such as classification accuracy and F1) are improper for clinically relevant decision thresholds other than 0.5 or the prevalence. We recommend the following measures and plots as essential to report: AUROC, calibration plot, a clinical utility measure such as net benefit with decision curve analysis, and a plot with probability distributions per outcome category.
The statistical advantage of automatic NLG metrics at the system level
Wei, Johnny Tian-Zheng, Jia, Robin
Estimating the expected output quality of generation systems is central to NLG. This paper qualifies the notion that automatic metrics are not as good as humans in estimating system-level quality. Statistically, humans are unbiased, high variance estimators, while metrics are biased, low variance estimators. We compare these estimators by their error in pairwise prediction (which generation system is better?) using the bootstrap. Measuring this error is complicated: predictions are evaluated against noisy, human predicted labels instead of the ground truth, and metric predictions fluctuate based on the test sets they were calculated on. By applying a bias-variance-noise decomposition, we adjust this error to a noise-free, infinite test set setting. Our analysis compares the adjusted error of metrics to humans and a derived, perfect segment-level annotator, both of which are unbiased estimators dependent on the number of judgments collected. In MT, we identify two settings where metrics outperform humans due to a statistical advantage in variance: when the number of human judgments used is small, and when the quality difference between compared systems is small. The data and code to reproduce our analyses are available at https://github.com/johntzwei/metric-statistical-advantage .
MEATRD: Multimodal Anomalous Tissue Region Detection Enhanced with Spatial Transcriptomics
Xu, Kaichen, Wu, Qilong, Lu, Yan, Zheng, Yinan, Li, Wenlin, Tang, Xingjie, Wang, Jun, Sun, Xiaobo
The detection of anomalous tissue regions (ATRs) within affected tissues is crucial in clinical diagnosis and pathological studies. Conventional automated ATR detection methods, primarily based on histology images alone, falter in cases where ATRs and normal tissues have subtle visual differences. The recent spatial transcriptomics (ST) technology profiles gene expressions across tissue regions, offering a molecular perspective for detecting ATRs. However, there is a dearth of ATR detection methods that effectively harness complementary information from both histology images and ST. To address this gap, we propose MEATRD, a novel ATR detection method that integrates histology image and ST data. MEATRD is trained to reconstruct image patches and gene expression profiles of normal tissue spots (inliers) from their multimodal embeddings, followed by learning a one-class classification AD model based on latent multimodal reconstruction errors. This strategy harmonizes the strengths of reconstruction-based and one-class classification approaches. At the heart of MEATRD is an innovative masked graph dual-attention transformer (MGDAT) network, which not only facilitates cross-modality and cross-node information sharing but also addresses the model over-generalization issue commonly seen in reconstruction-based AD methods. Additionally, we demonstrate that modality-specific, task-relevant information is collated and condensed in multimodal bottleneck encoding generated in MGDAT, marking the first theoretical analysis of the informational properties of multimodal bottleneck encoding. Extensive evaluations across eight real ST datasets reveal MEATRD's superior performance in ATR detection, surpassing various state-of-the-art AD methods. Remarkably, MEATRD also proves adept at discerning ATRs that only show slight visual deviations from normal tissues.
Fair Decentralized Learning
Biswas, Sayan, Kermarrec, Anne-Marie, Sharma, Rishi, Trinca, Thibaud, de Vos, Martijn
Decentralized learning (DL) is an emerging approach that enables nodes to collaboratively train a machine learning model without sharing raw data. In many application domains, such as healthcare, this approach faces challenges due to the high level of heterogeneity in the training data's feature space. Such feature heterogeneity lowers model utility and negatively impacts fairness, particularly for nodes with under-represented training data. In this paper, we introduce \textsc{Facade}, a clustering-based DL algorithm specifically designed for fair model training when the training data exhibits several distinct features. The challenge of \textsc{Facade} is to assign nodes to clusters, one for each feature, based on the similarity in the features of their local data, without requiring individual nodes to know apriori which cluster they belong to. \textsc{Facade} (1) dynamically assigns nodes to their appropriate clusters over time, and (2) enables nodes to collaboratively train a specialized model for each cluster in a fully decentralized manner. We theoretically prove the convergence of \textsc{Facade}, implement our algorithm, and compare it against three state-of-the-art baselines. Our experimental results on three datasets demonstrate the superiority of our approach in terms of model accuracy and fairness compared to all three competitors. Compared to the best-performing baseline, \textsc{Facade} on the CIFAR-10 dataset also reduces communication costs by 32.3\% to reach a target accuracy when cluster sizes are imbalanced.