Information about the contributions of individual authors to scientific publications is important for assessing authors' achievements. Some biomedical publications have a short section that describes authors' roles and contributions. It is usually written in natural language and hence author contributions cannot be trivially extracted in a machine-readable format. In this paper, we present 1) A statistical analysis of roles in author contributions sections, and 2) Na\"iveRole, a novel approach to extract structured authors' roles from author contribution sections. For the first part, we used co-clustering techniques, as well as Open Information Extraction, to semi-automatically discover the popular roles within a corpus of 2,000 contributions sections from PubMed Central. The discovered roles were used to automatically build a training set for Na\"iveRole, our role extractor approach, based on Na\"ive Bayes. Na\"iveRole extracts roles with a micro-averaged precision of 0.68, recall of 0.48 and F1 of 0.57. It is, to the best of our knowledge, the first attempt to automatically extract author roles from research papers. This paper is an extended version of a previous poster published at JCDL 2018.

The evidence says that liver disease detection using CAD is one of the most efficient techniques but the presence of better organization of studies and the performance parameters to represent the result analysis of the proposed techniques are pointedly missing in most of the recent studies. Few benchmarked studies have been found in some of the papers as benchmarking makes a reader understand that under which circumstances their experimental results or outcomes are better and useful for the future implementation and adoption of the work. Liver diseases and image processing algorithms, especially in medicine, are the most important and important topics of the day. Unfortunately, the necessary data and data, as they are invoked in the articles, are low in this area and require the revision and implementation of policies in order to gather and do more research in this field. Detection with ultrasound is quite normal in liver diseases and depends on the physician's experience and skills. CAD systems are very important for doctors to understand medical images and improve the accuracy of diagnosing various diseases. In the following, we describe the techniques used in the various stages of a CAD system, namely: extracting features, selecting features, and classifying them. Although there are many techniques that are used to classify medical images, it is still a challenging issue for creating a universally accepted approach.

Spike-and-wave discharge (SWD) pattern classification in electroencephalography (EEG) signals is a key problem in signal processing. It is particularly important to develop a SWD automatic detection method in long-term EEG recordings since the task of marking the patters manually is time consuming, difficult and error-prone. This paper presents a new detection method with a low computational complexity that can be easily trained if standard medical protocols are respected. The detection procedure is as follows: First, each EEG signal is divided into several time segments and for each time segment, the Morlet 1-D decomposition is applied. Then three parameters are extracted from the wavelet coefficients of each segment: scale (using a generalized Gaussian statistical model), variance and median. This is followed by a k-nearest neighbors (k-NN) classifier to detect the spike-and-wave pattern in each EEG channel from these three parameters. A total of 106 spike-and-wave and 106 non-spike-and-wave were used for training, while 69 new annotated EEG segments from six subjects were used for classification. In these circumstances, the proposed methodology achieved 100% accuracy. These results generate new research opportunities for the underlying causes of the so-called absence epilepsy in long-term EEG recordings.

A two-layer neural network model that systematically includes correlations among input variables to arbitrary order and is designed to implement Bayes inference has been adapted to classify breast cancer tumors as malignant or benign, assigning a probability for either outcome. The inputs to the network represent measured characteristics of cell nuclei imaged in Fine Needle Aspiration biopsies. The present machine-learning approach to diagnosis (known as HOPP, for higher-order probabilistic perceptron) is tested on the much-studied, open-access Breast Cancer Wisconsin (Diagnosis) Data Set of Wolberg et al. This set lists, for each tumor, measured physical parameters of the cell nuclei of each sample. The HOPP model can identify the key factors -- input features and their combinations -- most relevant for reliable diagnosis. HOPP networks were trained on 90\% of the examples in the Wisconsin database, and tested on the remaining 10\%. Referred to ensembles of 300 networks, selected randomly for cross-validation, accuracy of classification for the test sets of up to 97\% was readily achieved, with standard deviation around 2\%, together with average Matthews correlation coefficients reaching 0.94 indicating excellent predictive performance. Demonstrably, the HOPP is capable of matching the predictive power attained by other advanced machine-learning algorithms applied to this much-studied database, over several decades. Analysis shows that in this special problem, which is almost linearly separable, the effects of irreducible correlations among the measured features of the Wisconsin database are of relatively minor importance, as the Naive Bayes approximation can itself yield predictive accuracy approaching 95\%. The advantages of the HOPP algorithm will be more clearly revealed in application to more challenging machine-learning problems.

Sufficient dimension reduction (SDR) using distance covariance (DCOV) was recently proposed as an approach to dimension-reduction problems. Compared with other SDR methods, it is model-free without estimating link function and does not require any particular distributions on predictors (see Sheng and Yin, 2013, 2016). However, the DCOV-based SDR method involves optimizing a nonsmooth and nonconvex objective function over the Stiefel manifold. To tackle the numerical challenge, we novelly formulate the original objective function equivalently into a DC (Difference of Convex functions) program and construct an iterative algorithm based on the majorization-minimization (MM) principle. At each step of the MM algorithm, we inexactly solve the quadratic subproblem on the Stiefel manifold by taking one iteration of Riemannian Newton's method. The algorithm can also be readily extended to sufficient variable selection (SVS) using distance covariance. We establish the convergence property of the proposed algorithm under some regularity conditions. Simulation studies show our algorithm drastically improves the computation efficiency and is robust across various settings compared with the existing method. Supplemental materials for this article are available.

To assess the performance of load disaggregation algorithms it is common practise to train a candidate algorithm on data from one or multiple households and subsequently apply cross-validation by evaluating the classification and energy estimation performance on unseen portions of the dataset derived from the same households. With an emerging discussion of transferability in Non-Intrusive Load Monitoring (NILM), there is a need for domain-specific metrics to assess the performance of NILM algorithms on new test scenarios being unseen buildings. In this paper, we discuss several metrics to assess the generalisation ability of NILM algorithms. These metrics target different aspects of performance evaluation in NILM and are meant to complement the traditional performance evaluation approach. We demonstrate how our metrics can be utilised to evaluate NILM algorithms by means of two case studies. We conduct our studies on several energy consumption datasets and take into consideration five state-of-the-art as well as four baseline NILM solutions. Finally, we formulate research challenges for future work.

Evidential clustering is an approach to clustering in which cluster-membership uncertainty is represented by a collection of Dempster-Shafer mass functions forming an evidential partition. In this paper, we propose to construct these mass functions by bootstrapping finite mixture models. In the first step, we compute bootstrap percentile confidence intervals for all pairwise probabilities (the probabilities for any two objects to belong to the same class). We then construct an evidential partition such that the pairwise belief and plausibility degrees approximate the bounds of the confidence intervals. This evidential partition is calibrated, in the sense that the pairwise belief-plausibility intervals contain the true probabilities "most of the time", i.e., with a probability close to the defined confidence level. This frequentist property is verified by simulation, and the practical applicability of the method is demonstrated using several real datasets.

Machine learning-based lithography hotspot detection has been deeply studied recently, from varies feature extraction techniques to efficient learning models. It has been observed that such machine learning-based frameworks are providing satisfactory metal layer hotspot prediction results on known public metal layer benchmarks. In this work, we seek to evaluate how these machine learning-based hotspot detectors generalize to complicated patterns. We first introduce a automatic layout generation tool that can synthesize varies layout patterns given a set of design rules. The tool currently supports both metal layer and via layer generation. As a case study, we conduct hotspot detection on the generated via layer layouts with representative machine learning-based hotspot detectors, which shows that continuous study on model robustness and generality is necessary to prototype and integrate the learning engines in DFM flows. The source code of the layout generation tool will be available at https://github. com/phdyang007/layout-generation.

A key requirement for supervised machine learning is labeled training data, which is created by annotating unlabeled data with the appropriate class. Because this process can in many cases not be done by machines, labeling needs to be performed by human domain experts. This process tends to be expensive both in time and money, and is prone to errors. Additionally, reviewing an entire labeled dataset manually is often prohibitively costly, so many real world datasets contain mislabeled instances. To address this issue, we present in this paper a non-parametric end-to-end pipeline to find mislabeled instances in numerical, image and natural language datasets. We evaluate our system quantitatively by adding a small number of label noise to 29 datasets, and show that we find mislabeled instances with an average precision of more than 0.84 when reviewing our system's top 1\% recommendation. We then apply our system to publicly available datasets and find mislabeled instances in CIFAR-100, Fashion-MNIST, and others. Finally, we publish the code and an applicable implementation of our approach.

As the size and richness of available datasets grow larger, the opportunities for solving increasingly challenging problems with algorithms learning directly from data grow at the same pace. Consequently, the capability of learning algorithms to work with large amounts of data has become a crucial scientific and technological challenge for their practical applicability. Hence, it is no surprise that large-scale learning is currently drawing plenty of research effort in the machine learning research community. In this thesis, we focus on kernel methods, a theoretically sound and effective class of learning algorithms yielding nonparametric estimators. Kernel methods, in their classical formulations, are accurate and efficient on datasets of limited size, but do not scale up in a cost-effective manner. Recent research has shown that approximate learning algorithms, for instance random subsampling methods like Nystr\"om and random features, with time-memory-accuracy trade-off mechanisms are more scalable alternatives. In this thesis, we provide analyses of the generalization properties and computational requirements of several types of such approximation schemes. In particular, we expose the tight relationship between statistics and computations, with the goal of tailoring the accuracy of the learning process to the available computational resources. Our results are supported by experimental evidence on large-scale datasets and numerical simulations. We also study how large-scale learning can be applied to enable accurate, efficient, and reactive lifelong learning for robotics. In particular, we propose algorithms allowing robots to learn continuously from experience and adapt to changes in their operational environment. The proposed methods are validated on the iCub humanoid robot in addition to other benchmarks.