Performance Analysis
To Err Is Human: Systematic Quantification of Errors in Published AI Papers via LLM Analysis
Bianchi, Federico, Kwon, Yongchan, Izzo, Zachary, Zhang, Linjun, Zou, James
How many mistakes do published AI papers contain? Peer-reviewed publications form the foundation upon which new research and knowledge are built. Errors that persist in the literature can propagate unnoticed, creating confusion in follow-up studies and complicating reproducibility. The accelerating pace of research and the increasing demands on the peer-review system make such mistakes harder to detect and avoid. To address this, we developed a Paper Correctness Checker based on GPT-5 to systematically identify mistakes in papers previously published at top AI conferences and journals. Our analysis focuses on objective mistakes-e.g., errors in formulas, derivations, calculations, figures, and tables-that have a clearly verifiable ground truth. We intentionally exclude subjective considerations such as novelty, importance, or writing quality. We find that published papers contain a non-negligible number of objective mistakes and that the average number of mistakes per paper has increased over time-from 3.8 in NeurIPS 2021 to 5.9 in NeurIPS 2025 (55.3% increase); from 4.1 in ICLR 2018 to 5.2 in ICLR 2025; and from 5.0 in TMLR 2022/23 to 5.5 in TMLR 2025. Human experts reviewed 316 potential mistakes identified by the AI Checker and confirmed that 263 were actual mistakes, corresponding to a precision of 83.2%. While most identified issues are relatively minor, correcting them would reduce confusion in the literature and strengthen reproducibility. The AI Checker also surfaced potentially more substantive mistakes that could affect the interpretation of results. Moreover, we show that the AI Checker can propose correct fixes for 75.8% of the identified mistakes. Overall, this study highlights the potential of frontier LLMs to detect and correct objective mistakes in published papers, helping to establish a firmer foundation of knowledge.
Bootstrapping Fuzzers for Compilers of Low-Resource Language Dialects Using Language Models
Vaidya, Sairam, Böhme, Marcel, D'Antoni, Loris
Modern extensible compiler frameworks-such as MLIR-enable rapid creation of domain-specific language dialects. This flexibility, however, makes correctness harder to ensure as the same extensibility that accelerates development also complicates maintaining the testing infrastructure. Extensible languages require automated test generation that is both dialect-agnostic (works across dialects without manual adaptation) and dialect-effective (targets dialect-specific features to find bugs). Existing approaches typically sacrifice one of these goals by either requiring manually constructed seed corpora for each dialect, or by failing to be effective. We present a dialect-agnostic and dialect-effective grammar-based and coverage-guided fuzzing approach for extensible compilers that combines two key insights from existing work: (i) the grammars of dialects, which already encode the structural and type constraints, can often be extracted automatically from the dialect specification; and (ii) these grammars can be used in combination with pre-trained large language models to automatically generate representative and diverse seed inputs from the full dialect space without requiring any manual input or training data. These seeds can then be used to bootstrap coverage-guided fuzzers. We built this approach into a tool, Germinator. When evaluated on six MLIR projects spanning 91 dialects, Germinator generated seeds improve line coverage by 10-120% over grammar-based baselines. We compare against grammar-based baselines because they are the only class of existing automatic seed generators that can be applied uniformly across MLIR's heterogeneous dialect ecosystem. Germinator discovers 88 previously unknown bugs (40 confirmed), including 23 in dialects with no prior automated test generators, demonstrating effective and controllable testing of low-resource dialects at scale.
Predicting Price Movements in High-Frequency Financial Data with Spiking Neural Networks
Ezinwoke, Brian, Rhodes, Oliver
Modern high-frequency trading (HFT) environments are characterized by sudden price spikes that present both risk and opportunity, but conventional financial models often fail to capture the required fine temporal structure. Spiking Neural Networks (SNNs) offer a biologically inspired framework well-suited to these challenges due to their natural ability to process discrete events and preserve millisecond-scale timing. This work investigates the application of SNNs to high-frequency price-spike forecasting, enhancing performance via robust hyperparameter tuning with Bayesian Optimization (BO). This work converts high-frequency stock data into spike trains and evaluates three architectures: an established unsupervised STDP-trained SNN, a novel SNN with explicit inhibitory competition, and a supervised backpropagation network. BO was driven by a novel objective, Penalized Spike Accuracy (PSA), designed to ensure a network's predicted price spike rate aligns with the empirical rate of price events. Simulated trading demonstrated that models optimized with PSA consistently outperformed their Spike Accuracy (SA)-tuned counterparts and baselines. Specifically, the extended SNN model with PSA achieved the highest cumulative return (76.8%) in simple backtesting, significantly surpassing the supervised alternative (42.54% return). These results validate the potential of spiking networks, when robustly tuned with task-specific objectives, for effective price spike forecasting in HFT.
Beyond Data Filtering: Knowledge Localization for Capability Removal in LLMs
Shilov, Igor, Cloud, Alex, Gema, Aryo Pradipta, Goldman-Wetzler, Jacob, Panickssery, Nina, Sleight, Henry, Jones, Erik, Anil, Cem
Large Language Models increasingly possess capabilities that carry dual-use risks. While data filtering has emerged as a pretraining-time mitigation, it faces significant challenges: labeling whether data is harmful is expensive at scale, and given improving sample efficiency with larger models, even small amounts of mislabeled content could give rise to dangerous capabilities. To address risks associated with mislabeled harmful content, prior work proposed Gradient Routing (Cloud et al., 2024) -- a technique that localizes target knowledge into a dedicated subset of model parameters so they can later be removed. We explore an improved variant of Gradient Routing, which we call Selective GradienT Masking (SGTM), with particular focus on evaluating its robustness to label noise. SGTM zero-masks selected gradients such that target domain examples only update their dedicated parameters. We test SGTM's effectiveness in two applications: removing knowledge of one language from a model trained on a bilingual synthetic dataset, and removing biology knowledge from a model trained on English Wikipedia. In both cases SGTM provides better retain/forget trade-off in the presence of labeling errors compared to both data filtering and a previously proposed instantiation of Gradient Routing. Unlike shallow unlearning approaches that can be quickly undone through fine-tuning, SGTM exhibits strong robustness to adversarial fine-tuning, requiring seven times more fine-tuning steps to reach baseline performance on the forget set compared to a finetuning-based unlearning method (RMU). Our results suggest SGTM provides a promising pretraining-time complement to existing safety mitigations, particularly in settings where label noise is unavoidable.
Credal and Interval Deep Evidential Classifications
Caprio, Michele, Manchingal, Shireen K., Cuzzolin, Fabio
Uncertainty Quantification (UQ) presents a pivotal challenge in the field of Artificial Intelligence (AI), profoundly impacting decision-making, risk assessment and model reliability. In this paper, we introduce Credal and Interval Deep Evidential Classifications (CDEC and IDEC, respectively) as novel approaches to address UQ in classification tasks. CDEC and IDEC leverage a credal set (closed and convex set of probabilities) and an interval of evidential predictive distributions, respectively, allowing us to avoid overfitting to the training data and to systematically assess both epistemic (reducible) and aleatoric (irreducible) uncertainties. When those surpass acceptable thresholds, CDEC and IDEC have the capability to abstain from classification and flag an excess of epistemic or aleatoric uncertainty, as relevant. Conversely, within acceptable uncertainty bounds, CDEC and IDEC provide a collection of labels with robust probabilistic guarantees. CDEC and IDEC are trained using standard backpropagation and a loss function that draws from the theory of evidence. They overcome the shortcomings of previous efforts, and extend the current evidential deep learning literature. Through extensive experiments on MNIST, CIFAR-10 and CIFAR-100, together with their natural OoD shifts (F-MNIST/K-MNIST, SVHN/Intel, TinyImageNet), we show that CDEC and IDEC achieve competitive predictive accuracy, state-of-the-art OoD detection under epistemic and total uncertainty, and tight, well-calibrated prediction regions that expand reliably under distribution shift. An ablation over ensemble size further demonstrates that CDEC attains stable uncertainty estimates with only a small ensemble.
SEA-SafeguardBench: Evaluating AI Safety in SEA Languages and Cultures
Tasawong, Panuthep, Ngui, Jian Gang, Aji, Alham Fikri, Cohn, Trevor, Limkonchotiwat, Peerat
Safeguard models help large language models (LLMs) detect and block harmful content, but most evaluations remain English-centric and overlook linguistic and cultural diversity. Existing multilingual safety benchmarks often rely on machine-translated English data, which fails to capture nuances in low-resource languages. Southeast Asian (SEA) languages are underrepresented despite the region's linguistic diversity and unique safety concerns, from culturally sensitive political speech to region-specific misinformation. Addressing these gaps requires benchmarks that are natively authored to reflect local norms and harm scenarios. We introduce SEA-SafeguardBench, the first human-verified safety benchmark for SEA, covering eight languages, 21,640 samples, across three subsets: general, in-the-wild, and content generation. The experimental results from our benchmark demonstrate that even state-of-the-art LLMs and guardrails are challenged by SEA cultural and harm scenarios and underperform when compared to English texts.
Sepsis Prediction Using Graph Convolutional Networks over Patient-Feature-Value Triplets
Dan, Bozhi, Wu, Di, Xu, Ji, Liu, Xiang, Zhu, Yiziting, Shu, Xin, Li, Yujie, Yi, Bin
In the intensive care setting, sepsis continues to be a major contributor to patient illness and death; however, its timely detection is hindered by the complex, sparse, and heterogeneous nature of electronic health record (EHR) data. We propose Triplet-GCN, a single-branch graph convolutional model that represents each encounter as patient-feature-value triplets, constructs a bipartite EHR graph, and learns patient embeddings via a Graph Convolutional Network (GCN) followed by a lightweight multilayer perceptron (MLP). The pipeline applies type-specific preprocessing -- median imputation and standardization for numeric variables, effect coding for binary features, and mode imputation with low-dimensional embeddings for rare categorical attributes -- and initializes patient nodes with summary statistics, while retaining measurement values on edges to preserve "who measured what and by how much". In a retrospective, multi-center Chinese cohort (N = 648; 70/30 train-test split) drawn from three tertiary hospitals, Triplet-GCN consistently outperforms strong tabular baselines (KNN, SVM, XGBoost, Random Forest) across discrimination and balanced error metrics, yielding a more favorable sensitivity-specificity trade-off and improved overall utility for early warning. These findings indicate that encoding EHR as triplets and propagating information over a patient-feature graph produce more informative patient representations than feature-independent models, offering a simple, end-to-end blueprint for deployable sepsis risk stratification.
Moving object detection from multi-depth images with an attention-enhanced CNN
Shibukawa, Masato, Yoshida, Fumi, Yanagisawa, Toshifumi, Ito, Takashi, Kurosaki, Hirohisa, Yoshikawa, Makoto, Kamiya, Kohki, Jiang, Ji-an, Fraser, Wesley, Kavelaars, JJ, Benecchi, Susan, Verbiscer, Anne, Hatakeyama, Akira, O, Hosei, Ozaki, Naoya
One of the greatest challenges for detecting moving objects in the solar system from wide-field survey data is determining whether a signal indicates a true object or is due to some other source, like noise. Object verification has relied heavily on human eyes, which usually results in significant labor costs. In order to address this limitation and reduce the reliance on manual intervention, we propose a multi-input convolutional neural network integrated with a convolutional block attention module. This method is specifically tailored to enhance the moving object detection system that we have developed and used previously. The current method introduces two innovations. This first one is a multi-input architecture that processes multiple stacked images simultaneously. The second is the incorporation of the convolutional block attention module which enables the model to focus on essential features in both spatial and channel dimensions. These advancements facilitate efficient learning from multiple inputs, leading to more robust detection of moving objects. The performance of the model is evaluated on a dataset consisting of approximately 2,000 observational images. We achieved an accuracy of nearly 99% with AUC (an Area Under the Curve) of >0.99. These metrics indicate that the proposed model achieves excellent classification performance. By adjusting the threshold for object detection, the new model reduces the human workload by more than 99% compared to manual verification.
Enhancing Dimensionality Prediction in Hybrid Metal Halides via Feature Engineering and Class-Imbalance Mitigation
Karabin, Mariia, Armstrong, Isaac, Beck, Leo, Apanel, Paulina, Eisenbach, Markus, Mitzi, David B., Terletska, Hanna, Heinz, Hendrik
We present a machine learning framework for predicting the structural dimensionality of hybrid metal halides (HMHs), including organic-inorganic perovskites, using a combination of chemically-informed feature engineering and advanced class-imbalance handling techniques. The dataset, consisting of 494 HMH structures, is highly imbalanced across dimensionality classes (0D, 1D, 2D, 3D), posing significant challenges to predictive modeling. This dataset was later augmented to 1336 via the Synthetic Minority Oversampling Technique (SMOTE) to mitigate the effects of the class imbalance. We developed interaction-based descriptors and integrated them into a multi-stage workflow that combines feature selection, model stacking, and performance optimization to improve dimensionality prediction accuracy. Our approach significantly improves F1-scores for underrepresented classes, achieving robust cross-validation performance across all dimensionalities.
STAR-GO: Improving Protein Function Prediction by Learning to Hierarchically Integrate Ontology-Informed Semantic Embeddings
Akça, Mehmet Efe, Uludoğan, Gökçe, Özgür, Arzucan, Baytaş, İnci M.
Accurate prediction of protein function is essential for elucidating molecular mechanisms and advancing biological and therapeutic discovery. Yet experimental annotation lags far behind the rapid growth of protein sequence data. Computational approaches address this gap by associating proteins with Gene Ontology (GO) terms, which encode functional knowledge through hierarchical relations and textual definitions. However, existing models often emphasize one modality over the other, limiting their ability to generalize, particularly to unseen or newly introduced GO terms that frequently arise as the ontology evolves, and making the previously trained models outdated. We present STAR-GO, a Transformer-based framework that jointly models the semantic and structural characteristics of GO terms to enhance zero-shot protein function prediction. STAR-GO integrates textual definitions with ontology graph structure to learn unified GO representations, which are processed in hierarchical order to propagate information from general to specific terms. These representations are then aligned with protein sequence embeddings to capture sequence-function relationships. STAR-GO achieves state-of-the-art performance and superior zero-shot generalization, demonstrating the utility of integrating semantics and structure for robust and adaptable protein function prediction. Code is available at https://github.com/boun-tabi-lifelu/stargo.