Performance Analysis
Dealing with zero-inflated data: achieving SOTA with a two-fold machine learning approach
Rožanec, Jože M., Petelin, Gašper, Costa, João, Bertalanič, Blaž, Cerar, Gregor, Guček, Marko, Papa, Gregor, Mladenić, Dunja
In many cases, a machine learning model must learn to correctly predict a few data points with particular values of interest in a broader range of data where many target values are zero. Zero-inflated data can be found in diverse scenarios, such as lumpy and intermittent demands, power consumption for home appliances being turned on and off, impurities measurement in distillation processes, and even airport shuttle demand prediction. The presence of zeroes affects the models' learning and may result in poor performance. Furthermore, zeroes also distort the metrics used to compute the model's prediction quality. This paper showcases two real-world use cases (home appliances classification and airport shuttle demand prediction) where a hierarchical model applied in the context of zero-inflated data leads to excellent results. In particular, for home appliances classification, the weighted average of Precision, Recall, F1, and AUC ROC was increased by 27%, 34%, 49%, and 27%, respectively. Furthermore, it is estimated that the proposed approach is also four times more energy efficient than the SOTA approach against which it was compared to. Two-fold models performed best in all cases when predicting airport shuttle demand, and the difference against other models has been proven to be statistically significant.
Rethinking Negative Pairs in Code Search
Li, Haochen, Zhou, Xin, Tuan, Luu Anh, Miao, Chunyan
Recently, contrastive learning has become a key component in fine-tuning code search models for software development efficiency and effectiveness. It pulls together positive code snippets while pushing negative samples away given search queries. Among contrastive learning, InfoNCE is the most widely used loss function due to its better performance. However, the following problems in negative samples of InfoNCE may deteriorate its representation learning: 1) The existence of false negative samples in large code corpora due to duplications. 2). The failure to explicitly differentiate between the potential relevance of negative samples. As an example, a bubble sorting algorithm example is less ``negative'' than a file saving function for the quick sorting algorithm query. In this paper, we tackle the above problems by proposing a simple yet effective Soft-InfoNCE loss that inserts weight terms into InfoNCE. In our proposed loss function, we apply three methods to estimate the weights of negative pairs and show that the vanilla InfoNCE loss is a special case of Soft-InfoNCE. Theoretically, we analyze the effects of Soft-InfoNCE on controlling the distribution of learnt code representations and on deducing a more precise mutual information estimation. We furthermore discuss the superiority of proposed loss functions with other design alternatives. Extensive experiments demonstrate the effectiveness of Soft-InfoNCE and weights estimation methods under state-of-the-art code search models on a large-scale public dataset consisting of six programming languages. Source code is available at \url{https://github.com/Alex-HaochenLi/Soft-InfoNCE}.
SEE-OoD: Supervised Exploration For Enhanced Out-of-Distribution Detection
Song, Xiaoyang, Sun, Wenbo, Nouiehed, Maher, Kontar, Raed Al, Jin, Judy
Current techniques for Out-of-Distribution (OoD) detection predominantly rely on quantifying predictive uncertainty and incorporating model regularization during the training phase, using either real or synthetic OoD samples. However, methods that utilize real OoD samples lack exploration and are prone to overfit the OoD samples at hand. Whereas synthetic samples are often generated based on features extracted from training data, rendering them less effective when the training and OoD data are highly overlapped in the feature space. In this work, we propose a Wasserstein-score-based generative adversarial training scheme to enhance OoD detection accuracy, which, for the first time, performs data augmentation and exploration simultaneously under the supervision of limited OoD samples. Specifically, the generator explores OoD spaces and generates synthetic OoD samples using feedback from the discriminator, while the discriminator exploits both the observed and synthesized samples for OoD detection using a predefined Wasserstein score. We provide theoretical guarantees that the optimal solutions of our generative scheme are statistically achievable through adversarial training in empirical settings. We then demonstrate that the proposed method outperforms state-of-the-art techniques on various computer vision datasets and exhibits superior generalizability to unseen OoD data.
Exploring Large Language Models for Multi-Modal Out-of-Distribution Detection
Dai, Yi, Lang, Hao, Zeng, Kaisheng, Huang, Fei, Li, Yongbin
Out-of-distribution (OOD) detection is essential for reliable and trustworthy machine learning. Recent multi-modal OOD detection leverages textual information from in-distribution (ID) class names for visual OOD detection, yet it currently neglects the rich contextual information of ID classes. Large language models (LLMs) encode a wealth of world knowledge and can be prompted to generate descriptive features for each class. Indiscriminately using such knowledge causes catastrophic damage to OOD detection due to LLMs' hallucinations, as is observed by our analysis. In this paper, we propose to apply world knowledge to enhance OOD detection performance through selective generation from LLMs. Specifically, we introduce a consistency-based uncertainty calibration method to estimate the confidence score of each generation. We further extract visual objects from each image to fully capitalize on the aforementioned world knowledge. Extensive experiments demonstrate that our method consistently outperforms the state-of-the-art.
In-Context Unlearning: Language Models as Few Shot Unlearners
Pawelczyk, Martin, Neel, Seth, Lakkaraju, Himabindu
Machine unlearning, the study of efficiently removing the impact of specific training points on the trained model, has garnered increased attention of late, driven by the need to comply with privacy regulations like the Right to be Forgotten. Although unlearning is particularly relevant for LLMs in light of the copyright issues they raise, achieving precise unlearning is computationally infeasible for very large models. To this end, recent work has proposed several algorithms which approximate the removal of training data without retraining the model. These algorithms crucially rely on access to the model parameters in order to update them, an assumption that may not hold in practice due to computational constraints or when the LLM is accessed via API. In this work, we propose a new class of unlearning methods for LLMs we call ''In-Context Unlearning'', providing inputs in context and without having to update model parameters. To unlearn a particular training instance, we provide the instance alongside a flipped label and additional correctly labelled instances which are prepended as inputs to the LLM at inference time. Our experimental results demonstrate that these contexts effectively remove specific information from the training set while maintaining performance levels that are competitive with (or in some cases exceed) state-of-the-art unlearning methods that require access to the LLM parameters.
Seeing-Eye Quadruped Navigation with Force Responsive Locomotion Control
DeFazio, David, Hirota, Eisuke, Zhang, Shiqi
Seeing-eye robots are very useful tools for guiding visually impaired people, potentially producing a huge societal impact given the low availability and high cost of real guide dogs. Although a few seeing-eye robot systems have already been demonstrated, none considered external tugs from humans, which frequently occur in a real guide dog setting. In this paper, we simultaneously train a locomotion controller that is robust to external tugging forces via Reinforcement Learning (RL), and an external force estimator via supervised learning. The controller ensures stable walking, and the force estimator enables the robot to respond to the external forces from the human. These forces are used to guide the robot to the global goal, which is unknown to the robot, while the robot guides the human around nearby obstacles via a local planner. Experimental results in simulation and on hardware show that our controller is robust to external forces, and our seeing-eye system can accurately detect force direction. We demonstrate our full seeing-eye robot system on a real quadruped robot with a blindfolded human. The video can be seen at our project page: https://bu-air-lab.github.io/guide_dog/
Enhancing Chain-of-Thoughts Prompting with Iterative Bootstrapping in Large Language Models
Sun, Jiashuo, Luo, Yi, Gong, Yeyun, Lin, Chen, Shen, Yelong, Guo, Jian, Duan, Nan
Large language models (LLMs) can achieve highly effective performance on various reasoning tasks by incorporating step-by-step chain-of-thought (CoT) prompting as demonstrations. However, the reasoning chains of demonstrations generated by LLMs are prone to errors, which can subsequently lead to incorrect reasoning during inference. Furthermore, inappropriate exemplars (overly simplistic or complex), can affect overall performance among varying levels of difficulty. We introduce Iter-CoT (Iterative bootstrapping in Chain-of-Thoughts Prompting), an iterative bootstrapping approach for selecting exemplars and generating reasoning chains. By utilizing iterative bootstrapping, our approach enables LLMs to autonomously rectify errors, resulting in more precise and comprehensive reasoning chains. Simultaneously, our approach selects challenging yet answerable questions accompanied by reasoning chains as exemplars with a moderate level of difficulty, which enhances the LLMs' generalizability across varying levels of difficulty. Experimental results indicate that Iter-CoT exhibits superiority, achieving competitive performance across three distinct reasoning tasks on ten datasets.
Optimizing Convolutional Neural Networks for Chronic Obstructive Pulmonary Disease Detection in Clinical Computed Tomography Imaging
Dorosti, Tina, Schultheiss, Manuel, Hofmann, Felix, Thalhammer, Johannes, Kirchner, Luisa, Urban, Theresa, Pfeiffer, Franz, Schaff, Florian, Lasser, Tobias, Pfeiffer, Daniela
We aim to optimize the binary detection of Chronic Obstructive Pulmonary Disease (COPD) based on emphysema presence in the lung with convolutional neural networks (CNN) by exploring manually adjusted versus automated window-setting optimization (WSO) on computed tomography (CT) images. 7,194 CT images (3,597 with COPD; 3,597 healthy controls) from 78 subjects (43 with COPD; 35 healthy controls) were selected retrospectively (10.2018-12.2019) and preprocessed. For each image, intensity values were manually clipped to the emphysema window setting and a baseline 'full-range' window setting. Class-balanced train, validation, and test sets contained 3,392, 1,114, and 2,688 images. The network backbone was optimized by comparing various CNN architectures. Furthermore, automated WSO was implemented by adding a customized layer to the model. The image-level area under the Receiver Operating Characteristics curve (AUC) [lower, upper limit 95% confidence] was utilized to compare model variations. Repeated inference (n=7) on the test set showed that the DenseNet was the most efficient backbone and achieved a mean AUC of 0.80 [0.76, 0.85] without WSO. Comparably, with input images manually adjusted to the emphysema window, the DenseNet model predicted COPD with a mean AUC of 0.86 [0.82, 0.89]. By adding a customized WSO layer to the DenseNet, an optimal window in the proximity of the emphysema window setting was learned automatically, and a mean AUC of 0.82 [0.78, 0.86] was achieved. Detection of COPD with DenseNet models was improved by WSO of CT data to the emphysema window setting range.
Personalised dynamic super learning: an application in predicting hemodiafiltration's convection volumes
Chatton, Arthur, Bally, Michèle, Lévesque, Renée, Malenica, Ivana, Platt, Robert W., Schnitzer, Mireille E.
Obtaining continuously updated predictions is a major challenge for personalised medicine. Leveraging combinations of parametric regressions and machine learning approaches, the personalised online super learner (POSL) can achieve such dynamic and personalised predictions. We adapt POSL to predict a repeated continuous outcome dynamically and propose a new way to validate such personalised or dynamic prediction models. We illustrate its performance by predicting the convection volume of patients undergoing hemodiafiltration. POSL outperformed its candidate learners with respect to median absolute error, calibration-in-the-large, discrimination, and net benefit. We finally discuss the choices and challenges underlying the use of POSL.
Extensions of Heterogeneity in Integration and Prediction (HIP) with R Shiny Application
Butts, J., Wendt, C., Bowler, R., Hersh, C. P., Long, Q., Eberly, L., Safo, S. E.
Multiple data views measured on the same set of participants is becoming more common and has the potential to deepen our understanding of many complex diseases by analyzing these different views simultaneously. Equally important, many of these complex diseases show evidence of subgroup heterogeneity (e.g., by sex or race). HIP (Heterogeneity in Integration and Prediction) is among the first methods proposed to integrate multiple data views while also accounting for subgroup heterogeneity to identify common and subgroup-specific markers of a particular disease. However, HIP is applicable to continuous outcomes and requires programming expertise by the user. Here we propose extensions to HIP that accommodate multi-class, Poisson, and Zero-Inflated Poisson outcomes while retaining the benefits of HIP. Additionally, we introduce an R Shiny application, accessible on shinyapps.io at https://multi-viewlearn.shinyapps.io/HIP_ShinyApp/, that provides an interface with the Python implementation of HIP to allow more researchers to use the method anywhere and on any device. We applied HIP to identify genes and proteins common and specific to males and females that are associated with exacerbation frequency. Although some of the identified genes and proteins show evidence of a relationship with chronic obstructive pulmonary disease (COPD) in existing literature, others may be candidates for future research investigating their relationship with COPD. We demonstrate the use of the Shiny application with a publicly available data. An R-package for HIP would be made available at https://github.com/lasandrall/HIP.