Image Matching
CORE -- A Cell-Level Coarse-to-Fine Image Registration Engine for Multi-stain Image Alignment
Nasir, Esha Sadia, Elhaminia, Behnaz, Eastwood, Mark, King, Catherine, Cain, Owen, Harper, Lorraine, Moss, Paul, Chanouzas, Dimitrios, Snead, David, Rajpoot, Nasir, Shephard, Adam, Raza, Shan E Ahmed
Accurate and efficient registration of whole slide images (WSIs) is essential for high-resolution, nuclei-level analysis in multi-stained tissue slides. We propose a novel coarse-to-fine framework CORE for accurate nuclei-level registration across diverse multimodal whole-slide image (WSI) datasets. The coarse registration stage leverages prompt-based tissue mask extraction to effectively filter out artefacts and non-tissue regions, followed by global alignment using tissue morphology and ac- celerated dense feature matching with a pre-trained feature extractor. From the coarsely aligned slides, nuclei centroids are detected and subjected to fine-grained rigid registration using a custom, shape-aware point-set registration model. Finally, non-rigid alignment at the cellular level is achieved by estimating a non-linear dis- placement field using Coherent Point Drift (CPD). Our approach benefits from automatically generated nuclei that enhance the accuracy of deformable registra- tion and ensure precise nuclei-level correspondence across modalities. The pro- posed model is evaluated on three publicly available WSI registration datasets, and two private datasets. We show that CORE outperforms current state-of-the-art methods in terms of generalisability, precision, and robustness in bright-field and immunofluorescence microscopy WSIs
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Dendritic Convolution for Noise Image Recognition
Xue, Jiarui, Yang, Dongjian, Sun, Ye, Liu, Gang
In real-world scenarios of image recognition, there exists substantial noise interference. Existing works primarily focus on methods such as adjusting networks or training strategies to address noisy image recognition, and the anti-noise performance has reached a bottleneck. However, little is known about the exploration of anti-interference solutions from a neuronal perspective.This paper proposes an anti-noise neuronal convolution. This convolution mimics the dendritic structure of neurons, integrates the neighborhood interaction computation logic of dendrites into the underlying design of convolutional operations, and simulates the XOR logic preprocessing function of biological dendrites through nonlinear interactions between input features, thereby fundamentally reconstructing the mathematical paradigm of feature extraction. Unlike traditional convolution where noise directly interferes with feature extraction and exerts a significant impact, DDC mitigates the influence of noise by focusing on the interaction of neighborhood information. Experimental results demonstrate that in image classification tasks (using YOLOv11-cls, VGG16, and EfficientNet-B0) and object detection tasks (using YOLOv11, YOLOv8, and YOLOv5), after replacing traditional convolution with the dendritic convolution, the accuracy of the EfficientNet-B0 model on noisy datasets is relatively improved by 11.23%, and the mean Average Precision (mAP) of YOLOv8 is increased by 19.80%. The consistency between the computation method of this convolution and the dendrites of biological neurons enables it to perform significantly better than traditional convolution in complex noisy environments.
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A Simple Cache Model for Image Recognition
Training large-scale image recognition models is computationally expensive. This raises the question of whether there might be simple ways to improve the test performance of an already trained model without having to re-train or fine-tune it with new data. Here, we show that, surprisingly, this is indeed possible. The key observation we make is that the layers of a deep network close to the output layer contain independent, easily extractable class-relevant information that is not contained in the output layer itself. We propose to extract this extra class-relevant information using a simple key-value cache memory to improve the classification performance of the model at test time.
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