Neural Information Processing Systems http://nips.cc/

Accurate and efficient registration of whole slide images (WSIs) is essential for high-resolution, nuclei-level analysis in multi-stained tissue slides. We propose a novel coarse-to-fine framework CORE for accurate nuclei-level registration across diverse multimodal whole-slide image (WSI) datasets. The coarse registration stage leverages prompt-based tissue mask extraction to effectively filter out artefacts and non-tissue regions, followed by global alignment using tissue morphology and ac- celerated dense feature matching with a pre-trained feature extractor. From the coarsely aligned slides, nuclei centroids are detected and subjected to fine-grained rigid registration using a custom, shape-aware point-set registration model. Finally, non-rigid alignment at the cellular level is achieved by estimating a non-linear dis- placement field using Coherent Point Drift (CPD). Our approach benefits from automatically generated nuclei that enhance the accuracy of deformable registra- tion and ensure precise nuclei-level correspondence across modalities. The pro- posed model is evaluated on three publicly available WSI registration datasets, and two private datasets. We show that CORE outperforms current state-of-the-art methods in terms of generalisability, precision, and robustness in bright-field and immunofluorescence microscopy WSIs

In real-world scenarios of image recognition, there exists substantial noise interference. Existing works primarily focus on methods such as adjusting networks or training strategies to address noisy image recognition, and the anti-noise performance has reached a bottleneck. However, little is known about the exploration of anti-interference solutions from a neuronal perspective.This paper proposes an anti-noise neuronal convolution. This convolution mimics the dendritic structure of neurons, integrates the neighborhood interaction computation logic of dendrites into the underlying design of convolutional operations, and simulates the XOR logic preprocessing function of biological dendrites through nonlinear interactions between input features, thereby fundamentally reconstructing the mathematical paradigm of feature extraction. Unlike traditional convolution where noise directly interferes with feature extraction and exerts a significant impact, DDC mitigates the influence of noise by focusing on the interaction of neighborhood information. Experimental results demonstrate that in image classification tasks (using YOLOv11-cls, VGG16, and EfficientNet-B0) and object detection tasks (using YOLOv11, YOLOv8, and YOLOv5), after replacing traditional convolution with the dendritic convolution, the accuracy of the EfficientNet-B0 model on noisy datasets is relatively improved by 11.23%, and the mean Average Precision (mAP) of YOLOv8 is increased by 19.80%. The consistency between the computation method of this convolution and the dendrites of biological neurons enables it to perform significantly better than traditional convolution in complex noisy environments.

The word/phrase pairs in this evaluation dataset are collected from the click data with millions of users in an image search system, thus contain rich semantic relationships.

Training large-scale image recognition models is computationally expensive. This raises the question of whether there might be simple ways to improve the test performance of an already trained model without having to re-train or fine-tune it with new data. Here, we show that, surprisingly, this is indeed possible. The key observation we make is that the layers of a deep network close to the output layer contain independent, easily extractable class-relevant information that is not contained in the output layer itself. We propose to extract this extra class-relevant information using a simple key-value cache memory to improve the classification performance of the model at test time.

Neural Information Processing Systems http://nips.cc/

Training large-scale image recognition models is computationally expensive.

Image registration refers to the process of spatially aligning two or more images by mapping them into a common coordinate system, so that corresponding anatomical or tissue structures are matched across images. In digital pathology, registration enables direct comparison and integration of information from different stains or imaging modalities, sup-porting applications such as biomarker analysis and tissue reconstruction. Accurate registration of images from different modalities is an essential step in digital pathology. In this study, we investigated how various color transformation techniques affect image registration between hematoxylin and eosin (H&E) stained images and non-linear multimodal images. We used a dataset of 20 tissue sample pairs, with each pair undergoing several preprocessing steps, including different color transformation (CycleGAN, Macenko, Reinhard, Vahadane), inversion, contrast adjustment, intensity normalization, and denoising. All images were registered using the VALIS registration method, which first applies rigid registration and then performs non-rigid registration in two steps on both low and high-resolution images. Registration performance was evaluated using the relative Target Registration Error (rTRE). We reported the median of median rTRE values (MMrTRE) and the average of median rTRE values (AMrTRE) for each method. In addition, we performed a custom point-based evaluation using ten manually selected key points. Registration was done separately for two scenarios, using either the original or inverted multimodal images. In both scenarios, CycleGAN color transformation achieved the lowest registration errors, while the other methods showed higher errors. These findings show that applying color transformation before registration improves alignment between images from different modalities and supports more reliable analysis in digital pathology.

Deformable retinal image registration is notoriously difficult due to large homogeneous regions and sparse but critical vascular features, which cause limited gradient signals in standard learning-based frameworks. In this paper, we introduce Gaussian Primitive Optimization (GPO), a novel iterative framework that performs structured message passing to overcome these challenges. After an initial coarse alignment, we extract keypoints at salient anatomical structures (e.g., major vessels) to serve as a minimal set of descriptor-based control nodes (DCN). Each node is modelled as a Gaussian primitive with trainable position, displacement, and radius, thus adapting its spatial influence to local deformation scales. A K-Nearest Neighbors (KNN) Gaussian interpolation then blends and propagates displacement signals from these information-rich nodes to construct a globally coherent displacement field; focusing interpolation on the top (K) neighbors reduces computational overhead while preserving local detail. By strategically anchoring nodes in high-gradient regions, GPO ensures robust gradient flow, mitigating vanishing gradient signal in textureless areas. The framework is optimized end-to-end via a multi-term loss that enforces both keypoint consistency and intensity alignment. Experiments on the FIRE dataset show that GPO reduces the target registration error from 6.2\,px to ~2.4\,px and increases the AUC at 25\,px from 0.770 to 0.938, substantially outperforming existing methods. The source code can be accessed via https://github.com/xintian-99/GPOreg.

Prior medical image registration approaches, particularly learning-based methods, often require large amounts of training data, which constrains clinical adoption. To overcome this limitation, we propose a training-free pipeline that relies on a frozen DINOv3 encoder and test-time optimization of the deformation field in feature space. Across two representative benchmarks, the method is accurate and yields regular deformations. On Abdomen MR-CT, it attained the best mean Dice score (DSC) of 0.790 together with the lowest 95th percentile Hausdorff Distance (HD95) of 4.9+-5.0 and the lowest standard deviation of Log-Jacobian (SDLogJ) of 0.08+-0.02. On ACDC cardiac MRI, it improves mean DSC to 0.769 and reduces SDLogJ to 0.11 and HD95 to 4.8, a marked gain over the initial alignment. The results indicate that operating in a compact foundation feature space at test time offers a practical and general solution for clinical registration without additional training.