Deep Learning
Diffusion Transformers for Imputation: Statistical Efficiency and Uncertainty Quantification
Imputation methods play a critical role in enhancing the quality of practical timeseries data, which often suffer from pervasive missing values. Recently, diffusionbased generative imputation methods have demonstrated remarkable success compared to autoregressive and conventional statistical approaches. Despite their empirical success, the theoretical understanding of how well diffusion-based models capture complex spatial and temporal dependencies between the missing values and observed ones remains limited.
RAD: Towards Trustworthy Retrieval-Augmented Multi-modal Clinical Diagnosis
Clinical diagnosis is a highly specialized discipline requiring both domain expertise and strict adherence to rigorous guidelines. While current AI-driven medical research predominantly focuses on knowledge graphs or natural text pretraining paradigms to incorporate medical knowledge, these approaches primarily rely on implicitly encoded knowledge within model parameters, neglecting task-specific knowledge required by diverse downstream tasks. To address this limitation, we propose Retrieval-Augmented Diagnosis (RAD), a novel framework that explicitly injects external knowledge into multimodal models directly on downstream tasks. Specifically, RAD operates through three key mechanisms: retrieval and refinement of disease-centered knowledge from multiple medical sources, a guidelineenhanced contrastive loss that constrains the latent distance between multi-modal features and guideline knowledge, and the dual transformer decoder that employs guidelines as queries to steer cross-modal fusion, aligning the models with clinical diagnostic workflows from guideline acquisition to feature extraction and decision-making. Moreover, recognizing the lack of quantitative evaluation of interpretability for multimodal diagnostic models, we introduce a set of criteria to assess the interpretability from both image and text perspectives. Extensive evaluations across four datasets with different anatomies demonstrate RAD's generalizability, achieving state-of-the-art performance. Furthermore, RAD enables the model to concentrate more precisely on abnormal regions and critical indicators, ensuring evidence-based, trustworthy diagnosis. Our code is available at this repository.
BrainEC-LLM: Brain Effective Connectivity Estimation via Multiscale Mixing LLM
Pre-trained Large language models (LLMs) have shown impressive advancements in functional magnetic resonance imaging (fMRI) analysis and causal discovery. Considering the unique nature of the causal discovery field, which focuses on extracting causal graphs from observed data, research on LLMs in this field is still at an early exploratory stage. As a subfield of causal discovery, effective connectivity (EC) has received even less attention, and LLM-based approaches in EC remain unexplored. Existing LLM-based approaches for causal discovery typically rely on iterative querying to assess the causal influence between variable pairs, without any model adaptation or fine-tuning, making them ill-suited for handling the cross-modal gap and complex causal structures. To this end, we propose BrainECLLM, the first method to fine-tune LLMs for estimating brain EC from fMRI data. Specifically, multiscale decomposition mixing module decomposes fMRI time series data into short-term and long-term multiscale trends, then mixing them in bottom-up (fine to coarse) and top-down (coarse to fine) manner to extract multiscale temporal variations. And cross attention is applied with pre-trained word embeddings to ensure consistency between the fMRI input and pre-trained natural language. The experimental results on simulated and real resting-state fMRI datasets demonstrate that BrainEC-LLM can achieve superior performance when compared to state-of-the-art baselines. The code is available at https: //github.com/XiongWenXww/BrainEC-LLM.
Minitron-SSM: Efficient Hybrid Language Model Compression through Group-Aware SSMPruning
Hybrid language models that combine Attention and State Space Models (SSMs) have been shown to achieve state-of-the-art accuracy and runtime performance. Recent work has also demonstrated that applying pruning and distillation to Attentiononly models yields smaller, more accurate models at a fraction of the training cost. In this work, we explore the effectiveness of compressing Hybrid architectures. To this end, we introduce a novel group-aware pruning method for Mamba layers that preserves the structural integrity of SSM blocks and their sequence modeling capabilities. We combine this method with FFN, embedding dimension, and layer pruning, along with knowledge distillation-based retraining to obtain a unified compression recipe for hybrid models. Using this recipe, we compress the Nemotron-H 8BHybrid model down to 4B parameters with up to 40 fewer training tokens compared to similarly-sized models.
b238324b309da12c7446d92c14db9f7e-Paper-Conference.pdf
Multimodal hallucination in multimodal large language models (MLLMs) restricts the correctness of MLLMs. However, multimodal hallucinations are multi-sourced and arise from diverse causes. Existing benchmarks fail to adequately distinguish between perception-induced hallucinations and reasoning-induced hallucinations. This failure constitutes a significant issue and hinders the diagnosis of multimodal reasoning failures within MLLMs. To address this, we propose the MIRAGE benchmark, which isolates reasoning hallucinations by constructing questions where input images are correctly perceived by MLLMs yet reasoning errors persist. MIRAGE introduces multi-granular evaluation metrics: accuracy, factuality, and LLMs hallucination score for hallucination quantification. Our analysis reveals that (1) the model scale, data scale, and training stages significantly affect the degree of logical, fabrication, and factual hallucinations; (2) current MLLMs show no effective improvement on spatial hallucinations caused by misinterpreted spatial relationships, indicating their limited visual reasoning capabilities; and (3) question types correlate with distinct hallucination patterns, highlighting targeted challenges and potential mitigation strategies. To address these challenges, we propose Logos, a method that combines curriculum reinforcement fine-tuning to encourage models to generate logic-consistent reasoning chains by stepwise reducing learning difficulty, and collaborative hint inference to reduce reasoning complexity. Logos establishes a baseline on MIRAGE, and reduces the logical hallucinations in original base models.
Mars-Bench: ABenchmark for Evaluating Foundation Models for Mars Science Tasks
Foundation models have enabled rapid progress across many specialized domains by leveraging large-scale pre-training on unlabeled data, demonstrating strong generalization to a variety of downstream tasks. While such models have gained significant attention in fields like Earth Observation, their application to Mars science remains limited. A key enabler of progress in other domains has been the availability of standardized benchmarks that support systematic evaluation. In contrast, Mars science lacks such benchmarks and standardized evaluation frameworks, which have limited progress toward developing foundation models for Martian tasks. To address this gap, we introduce Mars-Bench, the first benchmark designed to systematically evaluate models across a broad range of Mars-related tasks using both orbital and surface imagery.
VideoREPA: Learning Physics for Video Generation through Relational Alignment with Foundation Models
Recent advancements in text-to-video (T2V) diffusion models have enabled highfidelity and realistic video synthesis. However, current T2V models often struggle to generate physically plausible content due to their limited inherent ability to accurately understand physics. We found that while the representations within T2V models possess some capacity for physics understanding, they lag significantly behind those from recent video self-supervised learning methods. To this end, we propose a novel framework called VideoREPA, which distills physics understanding capability from video understanding foundation models into T2V models by aligning token-level relations. This closes the physics understanding gap and enables more physics-plausible generation. Specifically, we introduce the Token Relation Distillation (TRD) loss, leveraging spatio-temporal alignment to provide soft guidance suitable for finetuning powerful pre-trained T2V models--a critical departure from prior representation alignment (REPA) methods.
Bridging Theory and Practice in Link Representation with Graph Neural Networks
Graph Neural Networks (GNNs) are widely used to compute representations of node pairs for downstream tasks such as link prediction. Yet, theoretical understanding of their expressive power has focused almost entirely on graph-level representations. In this work, we shift the focus to links and provide the first comprehensive study of GNN expressiveness in link representation. We introduce a unifying framework, the kϕ-kρ-mframework, that subsumes existing messagepassing link models and enables formal expressiveness comparisons. Using this framework, we derive a hierarchy of state-of-the-art methods and offer theoretical tools to analyze future architectures. To complement our analysis, we propose a synthetic evaluation protocol comprising the first benchmark specifically designed to assess link-level expressiveness. Finally, we ask: does expressiveness matter in practice? We use a graph symmetry metric that quantifies the difficulty of distinguishing links and show that while expressive models may underperform on standard benchmarks, they significantly outperform simpler ones as symmetry increases, highlighting the need for dataset-aware model selection.
MotionBind Multi Modal Human Motion Alignment for Retrieval Recognition and Generation
Recent advances in multi-modal representation learning have led to unified embedding spaces that align modalities such as images, text, audio, and vision. However, human motion sequences, a modality that is fundamental for understanding dynamic human activities, remains largely unrepresented in these frameworks. Semantic understanding of actions requires multi-modal grounding: text conveys descriptive semantics, vision provides visual context, and audio provides environmental cues. To bridge this gap, we propose MotionBind, a novel architecture that extends the LanguageBind embedding space to incorporate human motion. MotionBind has two major components. The first one is a Multi-Scale Temporal Motion Transformer (MuTMoT) that maps motion sequences to semantically meaningful embeddings. Multimodal alignment is achieved via diverse cross-modal supervision, including motion-text pairs from HumanML3D and KIT-ML, motion-video pairs rendered from AMASS, and motion-video-audio triplets from AIST++. The second component is a Retrieval-Augmented Latent diffusion Model (REALM) that can generate motion sequences conditioned on many modalities. MotionBind achieves state-of-the-art or competitive performance across motion reconstruction, cross-modal retrieval, zero-shot action recognition, and text-to-motion generation benchmarks.