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 Deep Learning


Pay Attention to Small Weights

Neural Information Processing Systems

Finetuning large pretrained neural networks is known to be resource-intensive, both in terms of memory and computational cost. To mitigate this, a common approach is to restrict training to a subset of the model parameters. By analyzing the relationship between gradients and weights during finetuning, we observe a notable pattern: large gradients are often associated with small-magnitude weights. This correlation is more pronounced in finetuning settings than in training from scratch. Motivated by this observation, we propose NANOADAM, which dynamically updates only the small-magnitude weights during finetuning and offers several practical advantages: first, the criterion is gradient-free--the parameter subset can be determined without gradient computation; second, it preserves large-magnitude weights, which are likely to encode critical features learned during pretraining, thereby reducing the risk of catastrophic forgetting; thirdly, it permits the use of larger learning rates and consistently leads to better generalization performance in experiments. We demonstrate this for both NLP and vision tasks.


Embracing Trustworthy Brain Agent Collaboration as Paradigm Extension for Intelligent Assistive Technologies

Neural Information Processing Systems

However, their widespread adoption is hindered by critical limitations, such as low information transfer rates and extensive user-specific calibration. To overcome these challenges, recent research has explored the integration of Large Language Models (LLMs), extending the focus from simple command decoding to understanding complex cognitive states. Despite these advancements, deploying agentic AI faces technical hurdles and ethical concerns. Due to the lack of comprehensive discussion on this emerging direction, this position paper argues that the field is poised for a paradigm extension from BCI to Brain-Agent Collaboration (BAC). We emphasize reframing agents as active and collaborative partners for intelligent assistance rather than passive brain signal data processors, demanding a focus on ethical data handling, model reliability, and a robust human-agent collaboration framework to ensure these systems are safe, trustworthy, and effective.


DETree: DEtecting Human-AI Collaborative Texts via Tree-Structured Hierarchical Representation Learning

Neural Information Processing Systems

Detecting AI-involved text is essential for combating misinformation, plagiarism, and academic misconduct. However, AI text generation includes diverse collaborative processes (AI-written text edited by humans, human-written text edited by AI, and AI-generated text refined by other AI), where various or even new LLMs could be involved. Texts generated through these varied processes exhibit complex characteristics, presenting significant challenges for detection. Current methods model these processes rather crudely, primarily employing binary classification (purely human vs. AI-involved) or multi-classification (treating human-AI collaboration as a new class). We observe that representations of texts generated through different processes exhibit inherent clustering relationships. Therefore, we propose DETree, a novel approach that models the relationships among different processes as a Hierarchical Affinity Tree structure, and introduces a specialized loss function that aligns text representations with this tree. To facilitate this learning, we developed RealBench, a comprehensive benchmark dataset that automatically incorporates a wide spectrum of hybrid texts produced through various human-AI collaboration processes. Our method improves performance in hybrid text detection tasks and significantly enhances robustness and generalization in out-of-distribution scenarios, particularly in few-shot learning conditions, further demonstrating the promise of training-based approaches in OOD settings.


FACE: AGeneral Framework for Mapping Collaborative Filtering Embeddings into LLMTokens

Neural Information Processing Systems

Recently, large language models (LLMs) have been explored for integration with collaborative filtering (CF)-based recommendation systems, which are crucial for personalizing user experiences. However, a key challenge is that LLMs struggle to interpret the latent, non-semantic embeddings produced by CF approaches, limiting recommendation effectiveness and further applications. To address this, we propose FACE, a general interpretable framework that maps CF embeddings into pre-trained LLM tokens. Specifically, we introduce a disentangled projection module to decompose CF embeddings into concept-specific vectors, followed by a quantized autoencoder to convert continuous embeddings into LLM tokens (descriptors). Then, we design a contrastive alignment objective to ensure that the tokens align with corresponding textual signals. Hence, the model-agnostic FACE framework achieves semantic alignment without fine-tuning LLMs and enhances recommendation performance by leveraging their pre-trained capabilities. Empirical results on three real-world recommendation datasets demonstrate performance improvements in benchmark models, with interpretability studies confirming the interpretability of the descriptors. Code is available in https://github.com/YixinRoll/FACE.


d6d26053b977f8c589669fd201615119-Paper-Conference.pdf

Neural Information Processing Systems

Large language models (LLMs) are trained on a vast amount of human-written data, but data providers often remain uncredited. In response to this issue, data valuation (or data attribution2), which quantifies the contribution or value of each data to the model output, has been discussed as a potential solution. Nevertheless, applying existing data valuation methods to recent LLMs and their vast training datasets has been largely limited by prohibitive compute and memory costs. In this work, we focus on influence functions, a popular gradient-based data valuation method, and significantly improve its scalability with an efficient gradient projection strategy called LOGRA that leverages the gradient structure in backpropagation. We then provide a theoretical motivation of gradient projection approaches to influence functions to promote trust in the data valuation process. Lastly, we lower the barrier to implementing data valuation systems by introducing LOGIX, a software package that can transform existing training code into data valuation code with minimal effort. In our data valuation experiments, LOGRA achieves competitive accuracy against more expensive baselines while showing up to 6,500 /5 improvements in compute/memory efficiency in influence computations as well as 2 speed-up in gradient statistics logging when applied to Llama3-8B-Instruct and the 1B-token subset of the OpenWebText dataset.


ALIGNVLM: Bridging Vision and Language Latent Spaces for Multimodal Document Understanding

Neural Information Processing Systems

Aligning visual features with language embeddings is a key challenge in visionlanguage models (VLMs). The performance of such models hinges on having a good connector that maps visual features generated by a vision encoder to a shared embedding space with the LLM while preserving semantic similarity. Existing connectors, such as multilayer perceptrons (MLPs), lack inductive bias to constrain visual features within the linguistic structure of the LLM's embedding space, making them data-hungry and prone to cross-modal misalignment. In this work, we propose a novel vision-text alignment method, ALIGNVLM, that maps visual features to a weighted average of LLM text embeddings. Our approach leverages the linguistic priors encoded by the LLM to ensure that visual features are mapped to regions of the space that the LLM can effectively interpret. ALIGNVLM is particularly effective for document understanding tasks, where visual and textual modalities are highly correlated. Our extensive experiments show that ALIGNVLM achieves state-of-the-art performance compared to prior alignment methods, with larger gains on document understanding tasks and under low-resource setups. We provide further analysis demonstrating its efficiency and robustness to noise.


RrED: Black-box Unsupervised Domain Adaptation via Rectifying-reasoning Errors of Diffusion

Neural Information Processing Systems

Black-box Unsupervised Domain Adaptation (BUDA) aims to transfer source domain knowledge to an unlabeled target domain, without accessing the source data or trained source model. Recent diffusion models have significantly advanced the ability to generate images from texts. While they can produce realistic visuals across diverse prompts and demonstrate impressive compositional generalization, these diffusion-based domain adaptation methods focus solely on composition, overlooking their sensitivity to textual nuances. In this work, we propose a novel diffusion-based method, called Rectifying-reasoning Errors of Diffusion (RrED) for BUDA. RrED is a two-stage learning strategy under diffusion supervision to effectively enhance the target model via the decomposed text and visual encoders from the diffusion model. Specifically, RrED consists of two stages: DiffusionTarget model Rectification (DTR) and Self-rectifying Reasoning Model (SRM). In DTR, we decouple the image and text encoders within the diffusion model: the visual encoder integrates our proposed feature-sensitive module to generate inferentially-enhanced visuals, while the text encoder enables multi-modal joint fine-tuning.


PRESCRIBE: Predicting Single-Cell Responses with Bayesian Estimation

Neural Information Processing Systems

In single-cell perturbation prediction, a central task is to forecast the effects of perturbing a gene unseen in the training data. The efficacy of such predictions depends on two factors: (1) the similarity of the target gene to those covered in the training data, which informs model (epistemic) uncertainty, and (2) the quality of the corresponding training data, which reflects data (aleatoric) uncertainty. Both factors are critical for determining the reliability of a prediction, particularly as gene perturbation is an inherently stochastic biochemical process. In this paper, we propose PRESCRIBE (PREdicting Single-Cell Response wIth Bayesian Estimation), a multivariate deep evidential regression framework designed to measure both sources of uncertainty jointly. Our analysis demonstrates that PRESCRIBE effectively estimates a confidence score for each prediction, which strongly correlates with its empirical accuracy. This capability enables the filtering of untrustworthy results, and in our experiments, it achieves steady accuracy improvements of over 3% compared to comparable baselines.


Steering Generative Models with Experimental Data for Protein Fitness Optimization

Neural Information Processing Systems

Protein fitness optimization involves finding a protein sequence that maximizes desired quantitative properties in a combinatorially large design space of possible sequences. Recent advances in steering protein generative models (e.g., diffusion models and language models) with labeled data offer a promising approach. However, most previous studies have optimized surrogate rewards and/or utilized large amounts of labeled data for steering, making it unclear how well existing methods perform and compare to each other in real-world optimization campaigns where fitness is measured through low-throughput wet-lab assays. In this study, we explore fitness optimization using small amounts (hundreds) of labeled sequencefitness pairs and comprehensively evaluate strategies such as classifier guidance and posterior sampling for guiding generation from different discrete diffusion models of protein sequences. We also demonstrate how guidance can be integrated into adaptive sequence selection akin to Thompson sampling in Bayesian optimization, showing that plug-and-play guidance strategies offer advantages over alternatives such as reinforcement learning with protein language models. Overall, we provide practical insights into how to effectively steer modern generative models for next-generation protein fitness optimization.


d61819e9b4a607b8448de762235148c4-Paper-Conference.pdf

Neural Information Processing Systems

Leveraging the lottery ticket hypothesis, novel training GMV pipeline, activates which diverse includes sub-net mix works ed-vie within w generation, a single GNN and multi-vie through w a decomposition and learning. This approach simultaneously broadens "views" from the data, model, and optimization perspectives during training to enhance the generalization additional prediction capabilities heads of into GNNs.