Deep Learning
AdaPKC: PeakConv with Adaptive Peak Receptive Field for Radar Semantic Segmentation
Deep learning-based radar detection technology is receiving increasing attention in areas such as autonomous driving, UAV surveillance, and marine monitoring. Among recent efforts, PeakConv (PKC) provides a solution that can retain the peak response characteristics of radar signals and play the characteristics of deep convolution, thereby improving the effect of radar semantic segmentation (RSS). However, due to the use of a pre-set fixed peak receptive field sampling rule, PKC still has limitations in dealing with problems such as inconsistency of target frequency domain response broadening, non-homogeneous and time-varying characteristic of noise/clutter distribution. Therefore, this paper proposes an idea of adaptive peak receptive field, and upgrades PKC to AdaPKC based on this idea. Beyond that, a novel fine-tuning technology to further boost the performance of AdaPKC-based RSS networks is presented. Through experimental verification using various real-measured radar data (including publicly available low-cost millimeter-wave radar dataset for autonomous driving and self-collected Ku-band surveillance radar dataset), we found that the performance of AdaPKC-based models surpasses other SoTA methods in RSS tasks.
Recurrent neural network dynamical systems for biological vision
In neuroscience, recurrent neural networks (RNNs) are modeled as continuous-time dynamical systems to more accurately reflect the dynamics inherent in biological circuits. However, convolutional neural networks (CNNs) remain the preferred architecture in vision neuroscience due to their ability to efficiently process visual information, which comes at the cost of the biological realism provided by RNNs. To address this, we introduce a hybrid architecture that integrates the continuous-time recurrent dynamics of RNNs with the spatial processing capabilities of CNNs. Our models preserve the dynamical characteristics typical of RNNs while having comparable performance with their conventional CNN counterparts on benchmarks like ImageNet. Compared to conventional CNNs, our models demonstrate increased robustness to noise due to noise-suppressing mechanisms inherent in recurrent dynamical systems. Analyzing our architecture as a dynamical system is computationally expensive, so we develop a toolkit consisting of iterative methods specifically tailored for convolutional structures. We also train multi-area RNNs using our architecture as the front-end to perform complex cognitive tasks previously impossible to learn or achievable only with oversimplified stimulus representations. In monkey neural recordings, our models capture time-dependent variations in neural activity in higher-order visual areas. Together, these contributions represent a comprehensive foundation to unify the advances of CNNs and dynamical RNNs in vision neuroscience.
Benchmarking Structural Inference Methods for Interacting Dynamical Systems with Synthetic Data
Understanding complex dynamical systems begins with identifying their topological structures, which expose the organization of the systems. This requires robust structural inference methods that can deduce structure from observed behavior. However, existing methods are often domain-specific and lack a standardized, objective comparison framework. We address this gap by benchmarking 13 structural inference methods from various disciplines on simulations representing two types of dynamics and 11 interaction graph models, supplemented by a biological experimental dataset to mirror real-world application. We evaluated the methods for accuracy, scalability, robustness, and sensitivity to graph properties. Our findings indicate that deep learning methods excel with multi-dimensional data, while classical statistics and information theory based approaches are notably accurate and robust.
GV-Rep: A Large-Scale Dataset for Genetic Variant Representation Learning
Genetic variants (GVs) are defined as differences in the DNA sequences among individuals and play a crucial role in diagnosing and treating genetic diseases. The rapid decrease in next generation sequencing cost, analogous to Moore's Law, has led to an exponential increase in the availability of patient-level GV data. This growth poses a challenge for clinicians who must efficiently prioritize patient-specific GVs and integrate them with existing genomic databases to inform patient management. To addressing the interpretation of GVs, genomic foundation models (GFMs) have emerged. However, these models lack standardized performance assessments, leading to considerable variability in model evaluations. This poses the question: *How effectively do deep learning methods classify unknown GVs and align them with clinically-verified GVs?* We argue that representation learning, which transforms raw data into meaningful feature spaces, is an effective approach for addressing both indexing and classification challenges. We introduce a large-scale Genetic Variant dataset, named $\textsf{GV-Rep}$, featuring variable-length contexts and detailed annotations, designed for deep learning models to learn GV representations across various traits, diseases, tissue types, and experimental contexts. Our contributions are three-fold: (i) $\textbf{Construction}$ of a comprehensive dataset with 7 million records, each labeled with characteristics of the corresponding variants, alongside additional data from 17,548 gene knockout tests across 1,107 cell types, 1,808 variant combinations, and 156 unique clinically-verified GVs from real-world patients.
InfoRM: Mitigating Reward Hacking in RLHF via Information-Theoretic Reward Modeling
Despite the success of reinforcement learning from human feedback (RLHF) in aligning language models with human values, reward hacking, also termed reward overoptimization, remains a critical challenge. This issue primarily arises from reward misgeneralization, where reward models (RMs) compute reward using spurious features that are irrelevant to human preferences. In this work, we tackle this problem from an information-theoretic perspective and propose a framework for reward modeling, namely InfoRM, by introducing a variational information bottleneck objective to filter out irrelevant information.Notably, we further identify a correlation between overoptimization and outliers in the IB latent space of InfoRM, establishing it as a promising tool for detecting reward overoptimization.Inspired by this finding, we propose the Cluster Separation Index (CSI), which quantifies deviations in the IB latent space, as an indicator of reward overoptimization to facilitate the development of online mitigation strategies. Extensive experiments on a wide range of settings and RM scales (70M, 440M, 1.4B, and 7B) demonstrate the effectiveness of InfoRM. Further analyses reveal that InfoRM's overoptimization detection mechanism is not only effective but also robust across a broad range of datasets, signifying a notable advancement in the field of RLHF. The code will be released upon acceptance.
An Improved Empirical Fisher Approximation for Natural Gradient Descent
Approximate Natural Gradient Descent (NGD) methods are an important family of optimisers for deep learning models, which use approximate Fisher information matrices to pre-condition gradients during training. The empirical Fisher (EF) method approximates the Fisher information matrix empirically by reusing the per-sample gradients collected during back-propagation. Despite its ease of implementation, the EF approximation has its theoretical and practical limitations. This paper investigates the issue of EF, which is shown to be a major cause of its poor empirical approximation quality. An improved empirical Fisher (iEF) method is proposed to address this issue, which is motivated as a generalised NGD method from a loss reduction perspective, meanwhile retaining the practical convenience of EF.
Exploring the trade-off between deep-learning and explainable models for brain-machine interfaces
People with brain or spinal cord-related paralysis often need to rely on others for basic tasks, limiting their independence. A potential solution is brain-machine interfaces (BMIs), which could allow them to voluntarily control external devices (e.g., robotic arm) by decoding brain activity to movement commands. In the past decade, deep-learning decoders have achieved state-of-the-art results in most BMI applications, ranging from speech production to finger control. However, the'black-box' nature of deep-learning decoders could lead to unexpected behaviors, resulting in major safety concerns in real-world physical control scenarios. In these applications, explainable but lower-performing decoders, such as the Kalman filter (KF), remain the norm. In this study, we designed a BMI decoder based on KalmanNet, an extension of the KF that augments its operation with recurrent neural networks to compute the Kalman gain.
Alleviating Distortion in Image Generation via Multi-Resolution Diffusion Models and Time-Dependent Layer Normalization
This paper presents innovative enhancements to diffusion models by integrating a novel multi-resolution network and time-dependent layer normalization.Diffusion models have gained prominence for their effectiveness in high-fidelity image generation.While conventional approaches rely on convolutional U-Net architectures, recent Transformer-based designs have demonstrated superior performance and scalability.However, Transformer architectures, which tokenize input data (via patchification), face a trade-off between visual fidelity and computational complexity due to the quadratic nature of self-attention operations concerning token length.While larger patch sizes enable attention computation efficiency, they struggle to capture fine-grained visual details, leading to image distortions.To address this challenge, we propose augmenting the **Di**ffusion model with the **M**ulti-**R**esolution network (DiMR), a framework that refines features across multiple resolutions, progressively enhancing detail from low to high resolution.Additionally, we introduce Time-Dependent Layer Normalization (TD-LN), a parameter-efficient approach that incorporates time-dependent parameters into layer normalization to inject time information and achieve superior performance.Our method's efficacy is demonstrated on the class-conditional ImageNet generation benchmark, where DiMR-XL variants surpass previous diffusion models, achieving FID scores of 1.70 on ImageNet $256 \times 256$ and 2.89 on ImageNet $512 \times 512$. Our best variant, DiMR-G, further establishes a state-of-the-art 1.63 FID on ImageNet $256 \times 256$.
DiffuPac: Contextual Mimicry in Adversarial Packets Generation via Diffusion Model
In domains of cybersecurity, recent advancements in Machine Learning (ML) and Deep Learning (DL) have significantly enhanced Network Intrusion Detection Systems (NIDS), improving the effectiveness of cybersecurity operations. However, attackers have also leveraged ML/DL to develop sophisticated models that generate adversarial packets capable of evading NIDS detection. Consequently, defenders must study and analyze these models to prepare for the evasion attacks that exploit NIDS detection mechanisms. Unfortunately, conventional generation models often rely on unrealistic assumptions about attackers' knowledge of NIDS components, making them impractical for real-world scenarios. To address this issue, we present DiffuPac, a first-of-its-kind generation model designed to generate adversarial packets that evade detection without relying on specific NIDS components. DiffuPac integrates a pre-trained Bidirectional Encoder Representations from Transformers (BERT) with diffusion model, which, through its capability for conditional denoising and classifier-free guidance, effectively addresses the real-world constraint of limited attacker knowledge. By concatenating malicious packets with contextually relevant normal packets and applying targeted noising only to the malicious packets, DiffuPac seamlessly blends adversarial packets into genuine network traffic. Through evaluations on real-world datasets, we demonstrate that DiffuPac achieves strong evasion capabilities against sophisticated NIDS, outperforming conventional methods by an average of 6.69 percentage points, while preserving the functionality and practicality of the generated adversarial packets.
Is Multiple Object Tracking a Matter of Specialization?
End-to-end transformer-based trackers have achieved remarkable performance on most human-related datasets. However, training these trackers in heterogeneous scenarios poses significant challenges, including negative interference - where the model learns conflicting scene-specific parameters - and limited domain generalization, which often necessitates expensive fine-tuning to adapt the models to new domains. In response to these challenges, we introduce Parameter-efficient Scenario-specific Tracking Architecture (PASTA), a novel framework that combines Parameter-Efficient Fine-Tuning (PEFT) and Modular Deep Learning (MDL). Specifically, we define key scenario attributes (e.g, camera-viewpoint, lighting condition) and train specialized PEFT modules for each attribute. These expert modules are combined in parameter space, enabling systematic generalization to new domains without increasing inference time. Extensive experiments on MOTSynth, along with zero-shot evaluations on MOT17 and PersonPath22 demonstrate that a neural tracker built from carefully selected modules surpasses its monolithic counterpart. We release models and code.