AI-driven discovery can greatly reduce design time and enhance new therapeutics' effectiveness. Models using simulators explore broad design spaces but risk violating implicit constraints due to a lack of experimental priors. For example, in a new analysis we performed on a diverse set of models on the GuacaMol benchmark using supervised classifiers, over 60\% of molecules proposed had high probability of being mutagenic. In this work, we introduce Medex, a dataset of priors for design problems extracted from literature describing compounds used in lab settings. It is constructed with LLM pipelines for discovering therapeutic entities in relevant paragraphs and summarizing information in concise fair-use facts. Medex consists of 32.3 million pairs of natural language facts, and appropriate entity representations (i.e. SMILES or refseq IDs). To demonstrate the potential of the data, we train LLM, CLIP, and LLava architectures to reason jointly about text and design targets and evaluate on tasks from the Therapeutic Data Commons (TDC). Medex is highly effective for creating models with strong priors: in supervised prediction problems that use our data as pretraining, our best models with 15M learnable parameters outperform larger 2B TxGemma on both regression and classification TDC tasks, and perform comparably to 9B models on average. Models built with Medex can be used as constraints while optimizing for novel molecules in GuacaMol, resulting in proposals that are safer and nearly as effective. We release our dataset at https://huggingface.co/datasets/medexanon/Medex, and will provide expanded versions as available literature grows.

Retrieval Augmented Generation (RAG) systems often struggle with domain-specific knowledge due to performance deterioration of pre-trained embeddings and prohibitive computational costs of large language model (LLM)-based retrievers. While fine-tuning data augmentation embedding models offers a promising direction, its effectiveness is limited by the need for high-quality training data and reliable chunking strategies that preserve contextual integrity. We propose LMAR (Language Model Augmented Retriever), a model-agnostic framework that addresses these challenges by combining LLM-guided data synthesis with contrastive embedding adaptation and efficient text clustering. LMAR consists of a two-stage pipeline: (1) Triplet sampling and synthetic data augmentation, where LLMs act as both labeler and validator to ensure high-fidelity supervision throughout the pipeline. Experimental results across multiple domain-specific benchmark datasets demonstrate that LMAR outperforms multiple baseline models, while maintaining moderate hardware requirements and low latency. Its model-agnostic nature further enables seamless integration with emerging RAG architectures and text embedding models, ensuring continual improvements without redesigning the pipeline. These results highlight LMAR as a practical and cost-effective solution for scalable domain-specific adaptation.

The convergence of Web3 technologies and AI agents represents a rapidly evolving frontier poised to reshape decentralized ecosystems. This paper presents the first and most comprehensive analysis of the intersection between Web3 and AI agents, examining five critical dimensions: landscape, economics, governance, security, and trust mechanisms. Through an analysis of 133 existing projects, we first develop a taxonomy and systematically map the current market landscape (RQ1), identifying distinct patterns in project distribution and capitalization. Building upon these findings, we further investigate four key integrations: (1) the role of AI agents in participating in and optimizing decentralized finance (RQ2); (2) their contribution to enhancing Web3 governance mechanisms (RQ3); (3) their capacity to strengthen Web3 security via intelligent vulnerability detection and automated smart contract auditing (RQ4); and (4) the establishment of robust reliability frameworks for AI agent operations leveraging Web3's inherent trust infrastructure (RQ5). By synthesizing these dimensions, we identify key integration patterns, highlight foundational challenges related to scalability, security, and ethics, and outline critical considerations for future research toward building robust, intelligent, and trustworthy decentralized systems with effective AI agent interactions.

Recent progress in large language models (LLMs) has opened new possibilities for mental health support, yet current approaches lack realism in simulating specialized psychotherapy and fail to capture therapeutic progression over time. Narrative therapy, which helps individuals transform problematic life stories into empowering alternatives, remains underutilized due to limited access and social stigma. We address these limitations through a comprehensive framework with two core components. First, INT (Interactive Narrative Therapist) simulates expert narrative therapists by planning therapeutic stages, guiding reflection levels, and generating contextually appropriate expert-like responses. Second, IMA (Innovative Moment Assessment) provides a therapy-centric evaluation method that quantifies effectiveness by tracking "Innovative Moments" (IMs), critical narrative shifts in client speech signaling therapy progress. Experimental results on 260 simulated clients and 230 human participants reveal that INT consistently outperforms standard LLMs in therapeutic quality and depth. We further demonstrate the effectiveness of INT in synthesizing high-quality support conversations to facilitate social applications.

Humour, as a complex language form, is derived from myriad aspects of life. Whilst existing work on computational humour has focussed almost exclusively on short pun-based jokes, we investigate whether the ability of Large Language Models (LLMs) to explain humour depends on the particular form. We compare models' joke explanation abilities from simple puns to complex topical humour that requires esoteric knowledge of real-world entities and events. To this end, we curate a dataset of 600 jokes across 4 joke types and manually write high-quality explanations. These jokes include heterographic and homographic puns, contemporary internet humour, and topical jokes. Using this dataset, we compare the zero-shot abilities of a range of LLMs to accurately and comprehensively explain jokes of different types, identifying key research gaps in the task of humour explanation. We find that none of the tested models (including reasoning models) are capable of reliably generating adequate explanations of all joke types, further highlighting the narrow focus of most existing works on overly simple joke forms.

In this work, we study the problem pertaining to personalized classification of subclinical atherosclerosis by developing a hierarchical graph neural network framework to leverage two characteristic modalities of a patient: clinical features within the context of the cohort, and molecular data unique to individual patients. Current graph-based methods for disease classification detect patient-specific molecular fingerprints, but lack consistency and comprehension regarding cohort-wide features, which are an essential requirement for understanding pathogenic phenotypes across diverse atherosclerotic trajectories. Furthermore, understanding patient subtypes often considers clinical feature similarity in isolation, without integration of shared pathogenic interdependencies among patients. To address these challenges, we introduce ATHENA: Atherosclerosis Through Hierarchical Explainable Neural Network Analysis, which constructs a novel hierarchical network representation through integrated modality learning; subsequently, it optimizes learned patient-specific molecular fingerprints that reflect individual omics data, enforcing consistency with cohort-wide patterns. With a primary clinical dataset of 391 patients, we demonstrate that this heterogeneous alignment of clinical features with molecular interaction patterns has significantly boosted subclinical atherosclerosis classification performance across various baselines by up to 13% in area under the receiver operating curve (AUC) and 20% in F1 score. Taken together, ATHENA enables mechanistically-informed patient subtype discovery through explainable AI (XAI)-driven subnetwork clustering; this novel integration framework strengthens personalized intervention strategies, thereby improving the prediction of atherosclerotic disease progression and management of their clinical actionable outcomes.

Multivariate long-term time series forecasting has been suffering from the challenge of capturing both temporal dependencies within variables and spatial correlations across variables simultaneously [1]. Current approaches predominantly repurpose backbones from natural language processing or computer vision (e.g., Transformers), which fail to adequately address the unique properties of time series (e.g., periodicity) [2]. The research community lacks a dedicated backbone with temporal-specific inductive biases, instead relying on domain-agnostic backbones supplemented with auxiliary techniques (e.g., signal decomposition). We introduce Fourier Neural Filter (FNF) as the backbone and Dual Branch Design (DBD) as the architecture to provide excellent learning capabilities and optimal learning pathways for spatio-temporal modeling, respectively. Our theoretical analysis proves that FNF unifies local time-domain and global frequency-domain information processing within a single backbone that extends naturally to spatial modeling, while information bottleneck theory demonstrates that DBD provides superior gradient flow and representation capacity compared to existing unified or sequential architectures. Our empirical evaluation across 11 public benchmark datasets spanning five domains (energy, meteorology, transportation, environment, and nature) confirms state-of-the-art performance with consistent hyperparameter settings. Notably, our approach achieves these results without any auxiliary techniques, suggesting that properly designed neural architectures can capture the inherent properties of time series, potentially transforming time series modeling in scientific and industrial applications.

Language models deployed in real-world systems often require post-hoc updates to incorporate new or corrected knowledge. However, editing such models efficiently and reliably-without retraining or forgetting previous information-remains a major challenge. Existing methods for lifelong model editing either compromise generalization, interfere with past edits, or fail to scale to long editing sequences. We propose MEMOIR, a novel scalable framework that injects knowledge through a residual memory, i.e., a dedicated parameter module, while preserving the core capabilities of the pre-trained model. By sparsifying input activations through sample-dependent masks, MEMOIR confines each edit to a distinct subset of the memory parameters, minimizing interference among edits. At inference, it identifies relevant edits by comparing the sparse activation patterns of new queries to those stored during editing. This enables generalization to rephrased queries by activating only the relevant knowledge while suppressing unnecessary memory activation for unrelated prompts. Experiments on question answering, hallucination correction, and out-of-distribution generalization benchmarks for LLaMA-3 and Mistral backbones demonstrate that MEMOIR achieves state-of-the-art performance across reliability, generalization, and locality metrics, scaling to thousands of sequential edits with minimal forgetting.

Foundation models represent the most prominent and recent paradigm shift in artificial intelligence. Foundation models are large models, trained on broad data that deliver high accuracy in many downstream tasks, often without fine-tuning. For this reason, models such as CLIP , DINO or Vision Transfomers (ViT), are becoming the bedrock of many industrial AI-powered applications. However, the reliance on pre-trained foundation models also introduces significant security concerns, as these models are vulnerable to adversarial attacks. Such attacks involve deliberately crafted inputs designed to deceive AI systems, jeopardizing their reliability. This paper studies the vulnerabilities of vision foundation models, focusing specifically on CLIP and ViTs, and explores the transferability of adversarial attacks to downstream tasks. We introduce a novel attack, targeting the structure of transformer-based architectures in a task-agnostic fashion. We demonstrate the effectiveness of our attack on several downstream tasks: classification, captioning, image/text retrieval, segmentation and depth estimation. Code available at:https://github.com/HondamunigePrasannaSilva/attack-attention

Test-Time Scaling (TTS) has proven effective in improving the performance of Large Language Models (LLMs) during inference. However, existing research has overlooked the efficiency of TTS from a latency-sensitive perspective. Through a latency-aware evaluation of representative TTS methods, we demonstrate that a compute-optimal TTS does not always result in the lowest latency in scenarios where latency is critical. To address this gap and achieve latency-optimal TTS, we propose two key approaches by optimizing the concurrency configurations: (1) branch-wise parallelism, which leverages multiple concurrent inference branches, and (2) sequence-wise parallelism, enabled by speculative decoding. By integrating these two approaches and allocating computational resources properly to each, our latency-optimal TTS enables a 32B model to reach 82.3% accuracy on MATH-500 within 1 minute and a smaller 3B model to achieve 72.4% within 10 seconds. Our work emphasizes the importance of latency-aware TTS and demonstrates its ability to deliver both speed and accuracy in latency-sensitive scenarios.