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 Deep Learning


Unraveling Misinformation Propagation in LLM Reasoning

arXiv.org Artificial Intelligence

Large Language Models (LLMs) have demonstrated impressive capabilities in reasoning, positioning them as promising tools for supporting human problem-solving. However, what happens when their performance is affected by misinformation, i.e., incorrect inputs introduced by users due to oversights or gaps in knowledge? Such misinformation is prevalent in real-world interactions with LLMs, yet how it propagates within LLMs' reasoning process remains underexplored. Focusing on mathematical reasoning, we present a comprehensive analysis of how misinformation affects intermediate reasoning steps and final answers. We also examine how effectively LLMs can correct misinformation when explicitly instructed to do so. Even with explicit instructions, LLMs succeed less than half the time in rectifying misinformation, despite possessing correct internal knowledge, leading to significant accuracy drops (10.02% - 72.20%), and the degradation holds with thinking models (4.30% - 19.97%). Further analysis shows that applying factual corrections early in the reasoning process most effectively reduces misinformation propagation, and fine-tuning on synthesized data with early-stage corrections significantly improves reasoning factuality. Our work offers a practical approach to mitigating misinformation propagation.


Graph Data Modeling: Molecules, Proteins, & Chemical Processes

arXiv.org Artificial Intelligence

Graphs are central to the chemical sciences, providing a natural language to describe molecules, proteins, reactions, and industrial processes. They capture interactions and structures that underpin materials, biology, and medicine. This primer, Graph Data Modeling: Molecules, Proteins, & Chemical Processes, introduces graphs as mathematical objects in chemistry and shows how learning algorithms (particularly graph neural networks) can operate on them. We outline the foundations of graph design, key prediction tasks, representative examples across chemical sciences, and the role of machine learning in graph-based modeling. Together, these concepts prepare readers to apply graph methods to the next generation of chemical discovery.


DRO-REBEL: Distributionally Robust Relative-Reward Regression for Fast and Efficient LLM Alignment

arXiv.org Machine Learning

Reinforcement learning with human feedback (RLHF) has become crucial for aligning Large Language Models (LLMs) with human intent. However, existing offline RLHF approaches suffer from overoptimization, where models overfit to reward misspecification and drift from preferred behaviors observed during training. We introduce DRO-REBEL, a unified family of robust REBEL updates with type-$p$ Wasserstein, KL, and $ฯ‡^2$ ambiguity sets. Using Fenchel duality, each update reduces to a simple relative-reward regression, preserving scalability and avoiding PPO-style clipping or auxiliary value networks. Under standard linear-reward and log-linear policy classes with a data-coverage condition, we establish $O(n^{-1/4})$ estimation bounds with tighter constants than prior DRO-DPO approaches, and recover the minimax-optimal $O(n^{-1/2})$ rate via a localized Rademacher complexity analysis. The same analysis closes the gap for Wasserstein-DPO and KL-DPO, showing both also attain optimal parametric rates. We derive practical SGD algorithms for all three divergences: gradient regularization (Wasserstein), importance weighting (KL), and a fast 1-D dual solve ($ฯ‡^2$). Experiments on Emotion Alignment, the large-scale ArmoRM multi-objective benchmark, and HH-Alignment demonstrate strong worst-case robustness across unseen preference mixtures, model sizes, and data scales, with $ฯ‡^2$-REBEL showing consistently strong empirical performance. A controlled radius--coverage study validates a no-free-lunch trade-off: radii shrinking faster than empirical divergence concentration rates achieve minimax-optimal parametric rates but forfeit coverage, while coverage-guaranteeing radii incur $O(n^{-1/4})$ rates.


Clapping: Removing Per-sample Storage for Pipeline Parallel Distributed Optimization with Communication Compression

arXiv.org Machine Learning

Pipeline-parallel distributed optimization is essential for large-scale machine learning but is challenged by significant communication overhead from transmitting high-dimensional activations and gradients between workers. Existing approaches often depend on impractical unbiased gradient assumptions or incur sample-size memory overhead. This paper introduces Clapping, a Communication compression algorithm with LAzy samPling for Pipeline-parallel learnING. Clapping adopts a lazy sampling strategy that reuses data samples across steps, breaking sample-wise memory barrier and supporting convergence in few-epoch or online training regimes. Clapping comprises two variants including Clapping-FC and Clapping-FU, both of which achieve convergence without unbiased gradient assumption, effectively addressing compression error propagation in multi-worker settings. Numerical experiments validate the performance of Clapping across different learning tasks.


Surrogate Modelling of Proton Dose with Monte Carlo Dropout Uncertainty Quantification

arXiv.org Machine Learning

Accurate proton dose calculation using Monte Carlo (MC) is computationally demanding in workflows like robust optimisation, adaptive replanning, and probabilistic inference, which require repeated evaluations. To address this, we develop a neural surrogate that integrates Monte Carlo dropout to provide fast, differentiable dose predictions along with voxelwise predictive uncertainty. The method is validated through a series of experiments, starting with a one-dimensional analytic benchmark that establishes accuracy, convergence, and variance decomposition. Two-dimensional bone-water phantoms, generated using TOPAS Geant4, demonstrate the method's behavior under domain heterogeneity and beam uncertainty, while a three-dimensional water phantom confirms scalability for volumetric dose prediction. Across these settings, we separate epistemic (model) from parametric (input) contributions, showing that epistemic variance increases under distribution shift, while parametric variance dominates at material boundaries. The approach achieves significant speedups over MC while retaining uncertainty information, making it suitable for integration into robust planning, adaptive workflows, and uncertainty-aware optimisation in proton therapy.


Augmenting Limited and Biased RCTs through Pseudo-Sample Matching-Based Observational Data Fusion Method

arXiv.org Machine Learning

In the online ride-hailing pricing context, companies often conduct randomized controlled trials (RCTs) and utilize uplift models to assess the effect of discounts on customer orders, which substantially influences competitive market outcomes. However, due to the high cost of RCTs, the proportion of trial data relative to observational data is small, which only accounts for 0.65\% of total traffic in our context, resulting in significant bias when generalizing to the broader user base. Additionally, the complexity of industrial processes reduces the quality of RCT data, which is often subject to heterogeneity from potential interference and selection bias, making it difficult to correct. Moreover, existing data fusion methods are challenging to implement effectively in complex industrial settings due to the high dimensionality of features and the strict assumptions that are hard to verify with real-world data. To address these issues, we propose an empirical data fusion method called pseudo-sample matching. By generating pseudo-samples from biased, low-quality RCT data and matching them with the most similar samples from large-scale observational data, the method expands the RCT dataset while mitigating its heterogeneity. We validated the method through simulation experiments, conducted offline and online tests using real-world data. In a week-long online experiment, we achieved a 0.41\% improvement in profit, which is a considerable gain when scaled to industrial scenarios with hundreds of millions in revenue. In addition, we discuss the harm to model training, offline evaluation, and online economic benefits when the RCT data quality is not high, and emphasize the importance of improving RCT data quality in industrial scenarios. Further details of the simulation experiments can be found in the GitHub repository https://github.com/Kairong-Han/Pseudo-Matching.


KM-GPT: An Automated Pipeline for Reconstructing Individual Patient Data from Kaplan-Meier Plots

arXiv.org Machine Learning

Reconstructing individual patient data (IPD) from Kaplan-Meier (KM) plots provides valuable insights for evidence synthesis in clinical research. However, existing approaches often rely on manual digitization, which is error-prone and lacks scalability. To address these limitations, we develop KM-GPT, the first fully automated, AI-powered pipeline for reconstructing IPD directly from KM plots with high accuracy, robustness, and reproducibility. KM-GPT integrates advanced image preprocessing, multi-modal reasoning powered by GPT-5, and iterative reconstruction algorithms to generate high-quality IPD without manual input or intervention. Its hybrid reasoning architecture automates the conversion of unstructured information into structured data flows and validates data extraction from complex KM plots. To improve accessibility, KM-GPT is equipped with a user-friendly web interface and an integrated AI assistant, enabling researchers to reconstruct IPD without requiring programming expertise. KM-GPT was rigorously evaluated on synthetic and real-world datasets, consistently demonstrating superior accuracy. To illustrate its utility, we applied KM-GPT to a meta-analysis of gastric cancer immunotherapy trials, reconstructing IPD to facilitate evidence synthesis and biomarker-based subgroup analyses. By automating traditionally manual processes and providing a scalable, web-based solution, KM-GPT transforms clinical research by leveraging reconstructed IPD to enable more informed downstream analyses, supporting evidence-based decision-making.


Extracting Conceptual Spaces from LLMs Using Prototype Embeddings

arXiv.org Artificial Intelligence

Conceptual spaces represent entities and concepts using cognitively meaningful dimensions, typically referring to perceptual features. Such representations are widely used in cognitive science and have the potential to serve as a cornerstone for explainable AI. Unfortunately, they have proven notoriously difficult to learn, although recent LLMs appear to capture the required perceptual features to a remarkable extent. Nonetheless, practical methods for extracting the corresponding conceptual spaces are currently still lacking. While various methods exist for extracting embeddings from LLMs, extracting conceptual spaces also requires us to encode the underlying features. In this paper, we propose a strategy in which features (e.g. sweetness) are encoded by embedding the description of a corresponding prototype (e.g. a very sweet food). To improve this strategy, we fine-tune the LLM to align the prototype embeddings with the corresponding conceptual space dimensions. Our empirical analysis finds this approach to be highly effective.


Efficient Reinforcement Learning by Reducing Forgetting with Elephant Activation Functions

arXiv.org Artificial Intelligence

Catastrophic forgetting has remained a significant challenge for efficient reinforcement learning for decades (Ring 1994, Rivest and Precup 2003). While recent works have proposed effective methods to mitigate this issue, they mainly focus on the algorithmic side. Meanwhile, we do not fully understand what architectural properties of neural networks lead to catastrophic forgetting. This study aims to fill this gap by studying the role of activation functions in the training dynamics of neural networks and their impact on catastrophic forgetting in reinforcement learning setup. Our study reveals that, besides sparse representations, the gradient sparsity of activation functions also plays an important role in reducing forgetting. Based on this insight, we propose a new class of activation functions, elephant activation functions, that can generate both sparse outputs and sparse gradients. We show that by simply replacing classical activation functions with elephant activation functions in the neural networks of value-based algorithms, we can significantly improve the resilience of neural networks to catastrophic forgetting, thus making reinforcement learning more sample-efficient and memory-efficient.


Integrating Stacked Intelligent Metasurfaces and Power Control for Dynamic Edge Inference via Over-The-Air Neural Networks

arXiv.org Artificial Intelligence

This paper introduces a novel framework for Edge Inference (EI) that bypasses the conventional practice of treating the wireless channel as noise. We utilize Stacked Intelligent Metasurfaces (SIMs) to control wireless propagation, enabling the channel itself to perform over-the-air computation. This eliminates the need for symbol estimation at the receiver, significantly reducing computational and communication overhead. Our approach models the transmitter-channel-receiver system as an end-to-end Deep Neural Network (DNN) where the response of the SIM elements are trainable parameters. To address channel variability, we incorporate a dedicated DNN module responsible for dynamically adjusting transmission power leveraging user location information. Our performance evaluations showcase that the proposed metasurfaces-integrated DNN framework with deep SIM architectures are capable of balancing classification accuracy and power consumption under diverse scenarios, offering significant energy efficiency improvements.