Deep Learning
A Quad-Step Approach to Uncertainty-Aware Deep Learning for Skin Cancer Classification
Asgharnezhad, Hamzeh, Tabarisaadi, Pegah, Khosravi, Abbas, Alizadehsani, Roohallah, Acharya, U. Rajendra
Accurate skin cancer diagnosis is vital for early treatment and improved patient outcomes. Deep learning (DL) models have shown promise in automating skin cancer classification, yet challenges remain due to data scarcity and limited uncertainty awareness. This study presents a comprehensive evaluation of DL-based skin lesion classification with transfer learning and uncertainty quantification (UQ) on the HAM10000 dataset. We benchmark several pre-trained feature extractors -- including CLIP variants, ResNet50, DenseNet121, VGG16, and EfficientNet-V2-Large -- combined with traditional classifiers such as SVM, XGBoost, and logistic regression. Multiple principal component analysis (PCA) settings (64, 128, 256, 512) are explored, with LAION CLIP ViT-H/14 and ViT-L/14 at PCA-256 achieving the strongest baseline results. In the UQ phase, Monte Carlo Dropout (MCD), Ensemble, and Ensemble Monte Carlo Dropout (EMCD) are applied and evaluated using uncertainty-aware metrics (UAcc, USen, USpe, UPre). Ensemble methods with PCA-256 provide the best balance between accuracy and reliability. Further improvements are obtained through feature fusion of top-performing extractors at PCA-256. Finally, we propose a feature-fusion based model trained with a predictive entropy (PE) loss function, which outperforms all prior configurations across both standard and uncertainty-aware evaluations, advancing trustworthy DL-based skin cancer diagnosis.
CellCLIP -- Learning Perturbation Effects in Cell Painting via Text-Guided Contrastive Learning
Lu, Mingyu, Weinberger, Ethan, Kim, Chanwoo, Lee, Su-In
High-content screening (HCS) assays based on high-throughput microscopy techniques such as Cell Painting have enabled the interrogation of cells' morphological responses to perturbations at an unprecedented scale. The collection of such data promises to facilitate a better understanding of the relationships between different perturbations and their effects on cellular state. Towards achieving this goal, recent advances in cross-modal contrastive learning could, in theory, be leveraged to learn a unified latent space that aligns perturbations with their corresponding morphological effects. However, the application of such methods to HCS data is not straightforward due to substantial differences in the semantics of Cell Painting images compared to natural images, and the difficulty of representing different classes of perturbations (e.g., small molecule vs CRISPR gene knockout) in a single latent space. In response to these challenges, here we introduce CellCLIP, a cross-modal contrastive learning framework for HCS data. CellCLIP leverages pre-trained image encoders coupled with a novel channel encoding scheme to better capture relationships between different microscopy channels in image embeddings, along with natural language encoders for representing perturbations. Our framework outperforms current open-source models, demonstrating the best performance in both cross-modal retrieval and biologically meaningful downstream tasks while also achieving significant reductions in computation time.
Urania: Differentially Private Insights into AI Use
Liu, Daogao, Cohen, Edith, Ghazi, Badih, Kairouz, Peter, Kamath, Pritish, Knop, Alexander, Kumar, Ravi, Manurangsi, Pasin, Sealfon, Adam, Yu, Da, Zhang, Chiyuan
We introduce $Urania$, a novel framework for generating insights about LLM chatbot interactions with rigorous differential privacy (DP) guarantees. The framework employs a private clustering mechanism and innovative keyword extraction methods, including frequency-based, TF-IDF-based, and LLM-guided approaches. By leveraging DP tools such as clustering, partition selection, and histogram-based summarization, $Urania$ provides end-to-end privacy protection. Our evaluation assesses lexical and semantic content preservation, pair similarity, and LLM-based metrics, benchmarking against a non-private Clio-inspired pipeline (Tamkin et al., 2024). Moreover, we develop a simple empirical privacy evaluation that demonstrates the enhanced robustness of our DP pipeline. The results show the framework's ability to extract meaningful conversational insights while maintaining stringent user privacy, effectively balancing data utility with privacy preservation.
RadialRouter: Structured Representation for Efficient and Robust Large Language Models Routing
Jin, Ruihan, Shao, Pengpeng, Wen, Zhengqi, Wu, Jinyang, Feng, Mingkuan, Zhang, Shuai, Tao, Jianhua
The rapid advancements in large language models (LLMs) have led to the emergence of routing techniques, which aim to efficiently select the optimal LLM from diverse candidates to tackle specific tasks, optimizing performance while reducing costs. Current LLM routing methods are limited in effectiveness due to insufficient exploration of the intrinsic connection between user queries and the characteristics of LLMs. To address this issue, in this paper, we present RadialRouter, a novel framework for LLM routing which employs a lightweight Transformer-based backbone with a radial structure named RadialFormer to articulate the query-LLMs relationship. The optimal LLM selection is performed based on the final states of RadialFormer. The pipeline is further refined by an objective function that combines Kullback-Leibler divergence with the query-query contrastive loss to enhance robustness. Experimental results on RouterBench show that RadialRouter significantly outperforms existing routing methods by 9.2\% and 5.8\% in the Balance and Cost First scenarios, respectively. Additionally, its adaptability toward different performance-cost trade-offs and the dynamic LLM pool demonstrates practical application potential.
OmniSpatial: Towards Comprehensive Spatial Reasoning Benchmark for Vision Language Models
Jia, Mengdi, Qi, Zekun, Zhang, Shaochen, Zhang, Wenyao, Yu, Xinqiang, He, Jiawei, Wang, He, Yi, Li
Spatial reasoning is a key aspect of cognitive psychology and remains a bottleneck for current vision-language models (VLMs). While extensive research has aimed to evaluate or improve VLMs' understanding of basic spatial relations, such as distinguishing left from right, near from far, and object counting, these tasks cover only the most elementary layer of spatial reasoning and are largely approaching saturation in the latest reasoning models. In this work, we introduce OmniSpatial, a comprehensive and challenging benchmark for spatial reasoning, grounded in cognitive psychology. OmniSpatial covers four major categories: dynamic reasoning, complex spatial logic, spatial interaction, and perspective-taking, with 50 fine-grained subcategories. Through careful manual annotation, we construct over 8.4K question-answer pairs. Extensive experiments show that both open- and closed-source VLMs exhibit significant limitations in comprehensive spatial reasoning. We also explore two strategies-PointGraph (explicit scene graph cues) and SpatialCoT (novel-view chain-of-thought)-to bolster spatial reasoning.
mdok of KInIT: Robustly Fine-tuned LLM for Binary and Multiclass AI-Generated Text Detection
The large language models (LLMs) are able to generate high-quality texts in multiple languages. Such texts are often not recognizable by humans as generated, and therefore present a potential of LLMs for misuse (e.g., plagiarism, spams, disinformation spreading). An automated detection is able to assist humans to indicate the machine-generated texts; however, its robustness to out-of-distribution data is still challenging. This notebook describes our mdok approach in robust detection, based on fine-tuning smaller LLMs for text classification. It is applied to both subtasks of Voight-Kampff Generative AI Detection 2025, providing remarkable performance (1st rank) in both, the binary detection as well as the multiclass classification of various cases of human-AI collaboration.
Latent Wavelet Diffusion For Ultra-High-Resolution Image Synthesis
Sigillo, Luigi, He, Shengfeng, Comminiello, Danilo
High-resolution image synthesis remains a core challenge in generative modeling, particularly in balancing computational efficiency with the preservation of fine-grained visual detail. We present Latent Wavelet Diffusion (LWD), a lightweight training framework that significantly improves detail and texture fidelity in ultra-high-resolution (2K-4K) image synthesis. LWD introduces a novel, frequency-aware masking strategy derived from wavelet energy maps, which dynamically focuses the training process on detail-rich regions of the latent space. This is complemented by a scale-consistent VAE objective to ensure high spectral fidelity. The primary advantage of our approach is its efficiency: LWD requires no architectural modifications and adds zero additional cost during inference, making it a practical solution for scaling existing models. Across multiple strong baselines, LWD consistently improves perceptual quality and FID scores, demonstrating the power of signal-driven supervision as a principled and efficient path toward high-resolution generative modeling.
Threading the Needle: Reweaving Chain-of-Thought Reasoning to Explain Human Label Variation
Chen, Beiduo, Liu, Yang Janet, Korhonen, Anna, Plank, Barbara
The recent rise of reasoning-tuned Large Language Models (LLMs)--which generate chains of thought (CoTs) before giving the final answer--has attracted significant attention and offers new opportunities for gaining insights into human label variation, which refers to plausible differences in how multiple annotators label the same data instance. Prior work has shown that LLM-generated explanations can help align model predictions with human label distributions, but typically adopt a reverse paradigm: producing explanations based on given answers. In contrast, CoTs provide a forward reasoning path that may implicitly embed rationales for each answer option, before generating the answers. We thus propose a novel LLM-based pipeline enriched with linguistically-grounded discourse segmenters to extract supporting and opposing statements for each answer option from CoTs with improved accuracy. We also propose a rank-based HLV evaluation framework that prioritizes the ranking of answers over exact scores, which instead favor direct comparison of label distributions. Our method outperforms a direct generation method as well as baselines on three datasets, and shows better alignment of ranking methods with humans, highlighting the effectiveness of our approach.
Multi-Modal Artificial Intelligence of Embryo Grading and Pregnancy Prediction in Assisted Reproductive Technology: A Review
Infertility, a pressing global health concern, affects a substantial proportion of individuals worldwide. While advancements in assisted reproductive technology (ART) have offered effective interventions, conventional in vitro fertilization-embryo transfer (IVF-ET) procedures still encounter significant hurdles in enhancing pregnancy success rates. Key challenges include the inherent subjectivity in embryo grading and the inefficiency of multi-modal data integration. Against this backdrop, the adoption of AI-driven technologies has emerged as a pivotal strategy to address these issues. This article presents a comprehensive review of the progress in AI applications for embryo grading and pregnancy prediction from a novel perspective, with a specific focus on the utilization of different modal data, such as static images, time-lapse videos, and structured tabular data. The reason for this perspective is that reorganizing tasks based on data sources can not only more accurately depict the essence of the problem but also help clarify the rationality and limitations of model design. Furthermore, this review critically examines the core challenges in contemporary research, encompassing the intricacies of multi-modal feature fusion, constraints imposed by data scarcity, limitations in model generalization capabilities, and the dynamically evolving legal and regulatory frameworks. On this basis, it explicitly identifies potential avenues for future research, aiming to provide actionable guidance for advancing the application of multi-modal AI in the field of ART.
Weaver: Interweaving SQL and LLM for Table Reasoning
Khoja, Rohit, Gupta, Devanshu, Fu, Yanjie, Roth, Dan, Gupta, Vivek
Querying tables with unstructured data is challenging due to the presence of text (or image), either embedded in the table or in external paragraphs, which traditional SQL struggles to process, especially for tasks requiring semantic reasoning. While Large Language Models (LLMs) excel at understanding context, they face limitations with long input sequences. Existing approaches that combine SQL and LLMs typically rely on rigid, predefined work-flows, limiting their adaptability to complex queries. To address these issues, we introduce Weaver , a modular pipeline that dynamically integrates SQL and LLMs for table-based question answering (TableQA). Weaver generates a flexible, step-by-step plan that combines SQL for structured data retrieval with LLMs for semantic processing. By decomposing complex queries into manageable subtasks, Weaver improves accuracy and generalization. Our experiments show that Weaver consistently outperforms state-of-the-art methods across four TableQA datasets, reducing both API calls and error rates. The code, along with other associated scripts, are available at https://coral-lab-asu.github.io/weaver.