Deep Learning
On knot detection via picture recognition
Dranowski, Anne, Kabkov, Yura, Tubbenhauer, Daniel
Our goal is to one day take a photo of a knot and have a phone automatically recognize it. In this expository work, we explain a strategy to approximate this goal, using a mixture of modern machine learning methods (in particular convolutional neural networks and transformers for image recognition) and traditional algorithms (to compute quantum invariants like the Jones polynomial). We present simple baselines that predict crossing number directly from images, showing that even lightweight CNN and transformer architectures can recover meaningful structural information. The longer-term aim is to combine these perception modules with symbolic reconstruction into planar diagram (PD) codes, enabling downstream invariant computation for robust knot classification. This two-stage approach highlights the complementarity between machine learning, which handles noisy visual data, and invariants, which enforce rigorous topological distinctions.
SER-Diff: Synthetic Error Replay Diffusion for Incremental Brain Tumor Segmentation
Incremental brain tumor segmentation is critical for models that must adapt to evolving clinical datasets without retraining on all prior data. However, catastrophic forgetting, where models lose previously acquired knowledge, remains a major obstacle. Recent incremental learning frameworks with knowledge distillation partially mitigate forgetting but rely heavily on generative replay or auxiliary storage. Meanwhile, diffusion models have proven effective for refining tumor segmentations, but have not been explored in incremental learning contexts. We propose Synthetic Error Replay Diffusion (SER-Diff), the first framework that unifies diffusion-based refinement with incremental learning. SER-Diff leverages a frozen teacher diffusion model to generate synthetic error maps from past tasks, which are replayed during training on new tasks. A dual-loss formulation combining Dice loss for new data and knowledge distillation loss for replayed errors ensures both adaptability and retention. Experiments on BraTS2020, BraTS2021, and BraTS2023 demonstrate that SER-Diff consistently outperforms prior methods. It achieves the highest Dice scores of 95.8\%, 94.9\%, and 94.6\%, along with the lowest HD95 values of 4.4 mm, 4.7 mm, and 4.9 mm, respectively. These results indicate that SER-Diff not only mitigates catastrophic forgetting but also delivers more accurate and anatomically coherent segmentations across evolving datasets.
Improving the Spatial Resolution of GONG Solar Images to GST Quality Using Deep Learning
Li, Chenyang, Li, Qin, Wang, Haimin, Shen, Bo
High-resolution (HR) solar imaging is crucial for capturing fine-scale dynamic features such as filaments and fibrils. However, the spatial resolution of the full-disk H$ฮฑ$ images is limited and insufficient to resolve these small-scale structures. To address this, we propose a GAN-based superresolution approach to enhance low-resolution (LR) full-disk H$ฮฑ$ images from the Global Oscillation Network Group (GONG) to a quality comparable with HR observations from the Big Bear Solar Observatory/Goode Solar Telescope (BBSO/GST). We employ Real-ESRGAN with Residual-in-Residual Dense Blocks and a relativistic discriminator. We carefully aligned GONG-GST pairs. The model effectively recovers fine details within sunspot penumbrae and resolves fine details in filaments and fibrils, achieving an average mean squared error (MSE) of 467.15, root mean squared error (RMSE) of 21.59, and cross-correlation (CC) of 0.7794. Slight misalignments between image pairs limit quantitative performance, which we plan to address in future work alongside dataset expansion to further improve reconstruction quality.
Surgeons Are Indian Males and Speech Therapists Are White Females: Auditing Biases in Vision-Language Models for Healthcare Professionals
Siddiqui, Zohaib Hasan, Nadeem, Dayam, Rahman, Mohammad Masudur, Nadeem, Mohammad, Sohail, Shahab Saquib, Chaudhry, Beenish Moalla
Abstract--Vision language models (VLMs), such as CLIP and OpenCLIP, can encode and reflect stereotypical associations between medical professions and demographic attributes learned from web-scale data. We present an evaluation protocol for healthcare settings that quantifies associated biases and assesses their operational risk. Our methodology (i) defines a taxonomy spanning clinicians and allied healthcare roles (e.g., surgeon, cardiologist, dentist, nurse, pharmacist, technician), (ii) curates a profession-aware prompt suite to probe model behavior, and (iii) benchmarks demographic skew against a balanced face corpus. Empirically, we observe consistent demographic biases across multiple roles and vision models. Our work highlights the importance of bias identification in critical domains such as healthcare as AI-enabled hiring and workforce analytics can have downstream implications for equity, compliance, and patient trust. Vision language models (VLMs) constitute a class of AI architectures that learn joint representation by aligning visual perception with natural language semantics [1]. Typically, an image encoder is paired with a text encoder and trained to inhabit a shared embedding space that supports cross-modal correspondence between images and linguistic descriptions. One such instance is OpenAI's CLIP (Contrastive Language Image Pretraining) which is optimized on roughly 400 million image-text pairs and exhibits strong zero-shot ability for The code can be found at https://github.com/zohaibhasan066/ VLMs enable a broad spectrum of multimodal functionalities, including image captioning, visual question answering, and bidirectional text-image retrieval with downstream applications in search, recommendation, and human-computer interaction.
A Total Variation Regularized Framework for Epilepsy-Related MRI Image Segmentation
Rabiee, Mehdi, Greco, Sergio, Shahbazian, Reza, Trubitsyna, Irina
Focal Cortical Dysplasia (FCD) is a primary cause of drug-resistant epilepsy and is difficult to detect in brain {magnetic resonance imaging} (MRI) due to the subtle and small-scale nature of its lesions. Accurate segmentation of FCD regions in 3D multimodal brain MRI images is essential for effective surgical planning and treatment. However, this task remains highly challenging due to the limited availability of annotated FCD datasets, the extremely small size and weak contrast of FCD lesions, the complexity of handling 3D multimodal inputs, and the need for output smoothness and anatomical consistency, which is often not addressed by standard voxel-wise loss functions. This paper presents a new framework for segmenting FCD regions in 3D brain MRI images. We adopt state-of-the-art transformer-enhanced encoder-decoder architecture and introduce a novel loss function combining Dice loss with an anisotropic {Total Variation} (TV) term. This integration encourages spatial smoothness and reduces false positive clusters without relying on post-processing. The framework is evaluated on a public FCD dataset with 85 epilepsy patients and demonstrates superior segmentation accuracy and consistency compared to standard loss formulations. The model with the proposed TV loss shows an 11.9\% improvement on the Dice coefficient and 13.3\% higher precision over the baseline model. Moreover, the number of false positive clusters is reduced by 61.6%
Reproducibility Study of "XRec: Large Language Models for Explainable Recommendation"
Mishra, Ranjan, Bibo, Julian I., van Engelen, Quinten, Schaapman, Henk
In this study, we reproduced the work done in the paper "XRec: Large Language Models for Explainable Recommendation" by Ma et al. (2024). The original authors introduced XRec, a model-agnostic collaborative instruction-tuning framework that enables large language models (LLMs) to provide users with comprehensive explanations of generated recommendations. Our objective was to replicate the results of the original paper, albeit using Llama 3 as the LLM for evaluation instead of GPT-3.5-turbo. We built on the source code provided by Ma et al. (2024) to achieve our goal. Our work extends the original paper by modifying the input embeddings or deleting the output embeddings of XRec's Mixture of Experts module. Based on our results, XRec effectively generates personalized explanations and its stability is improved by incorporating collaborative information. However, XRec did not consistently outperform all baseline models in every metric. Our extended analysis further highlights the importance of the Mixture of Experts embeddings in shaping the explanation structures, showcasing how collaborative signals interact with language modeling. Through our work, we provide an open-source evaluation implementation that enhances accessibility for researchers and practitioners alike.
Bridging Reasoning to Learning: Unmasking Illusions using Complexity Out of Distribution Generalization
Paqaleh, Mohammad Mahdi Samiei, Marioriyad, Arash, Tahmasebi-Zadeh, Arman, Fereydooni, Mohamadreza, Ghaznavai, Mahdi, Baghshah, Mahdieh Soleymani
Recent progress has pushed AI frontiers from pattern recognition tasks toward problems that require step by step, System2 style reasoning, especially with large language models. Yet, unlike learning, where generalization and out of distribution (OoD) evaluation concepts are well formalized, there is no clear, consistent definition or metric for reasoning ability. We propose Complexity Out of Distribution (Complexity OoD) generalization as a framework and problem setting to define and measure reasoning. A model exhibits Complexity OoD generalization when it maintains performance on test instances whose minimal required solution complexity, either representational (richer solution structure) or computational (more reasoning steps/program length), exceeds that of all training examples. We formalize complexity via solution description Kolmogorov complexity and operational proxies (e.g., object/relation counts; reasoning step counts), clarifying how Complexity OoD differs from length and compositional OoD. This lens unifies learning and reasoning: many cases solvable with System1 like processing at low complexity become System2 like under complexity pressure, while System2 can be viewed as generalization over solution structures. We translate this perspective into practice with recommendations for operationalizing Complexity OoD across the stack: incorporating complexity into benchmark and evaluation metric design, rethinking supervision to target solution traces, seeking and designing inductive biases for Complexity OoD generalization, addressing learning to reason spillovers such as spurious shortcuts, semantic robustness, catastrophic forgetting, and step wise calibration. Because Complexity OoD cannot be solved by scaling data alone, progress toward robust reasoning will require architectures and training regimes that explicitly model and allocate computation with respect to complexity.
Vision Transformer for Transient Noise Classification
Srivastava, Divyansh, Niedzielski, Andrzej
Transient noise (glitches) in LIGO data hinders the detection of gravitational waves (GW). The Gravity Spy project has categorized these noise events into various classes. With the O3 run, there is the inclusion of two additional noise classes and thus a need to train new models for effective classification. We aim to classify glitches in LIGO data into 22 existing classes from the first run plus 2 additional noise classes from O3a using the Vision Transformer (ViT) model. We train a pre-trained Vision Transformer (ViT-B/32) model on a combined dataset consisting of the Gravity Spy dataset with the additional two classes from the LIGO O3a run. We achieve a classification efficiency of 92.26%, demonstrating the potential of Vision Transformer to improve the accuracy of gravitational wave detection by effectively distinguishing transient noise. Key words: gravitational waves --vision transformer --machine learning
Language models for longitudinal analysis of abusive content in Billboard Music Charts
Chandra, Rohitash, Suresh, Yathin, Sinha, Divyansh Raj, Jindal, Sanchit
There is no doubt that there has been a drastic increase in abusive and sexually explicit content in music, particularly in Billboard Music Charts. However, there is a lack of studies that validate the trend for effective policy development, as such content has harmful behavioural changes in children and youths. In this study, we utilise deep learning methods to analyse songs (lyrics) from Billboard Charts of the United States in the last seven decades. We provide a longitudinal study using deep learning and language models and review the evolution of content using sentiment analysis and abuse detection, including sexually explicit content. Our results show a significant rise in explicit content in popular music from 1990 onwards. Furthermore, we find an increasing prevalence of songs with lyrics containing profane, sexually explicit, and otherwise inappropriate language. The longitudinal analysis of the ability of language models to capture nuanced patterns in lyrical content, reflecting shifts in societal norms and language use over time.
Dual-stage and Lightweight Patient Chart Summarization for Emergency Physicians
Wu, Jiajun, Zaidi, Swaleh, Teitge, Braden, Leung, Henry, Zhou, Jiayu, Holodinsky, Jessalyn, Drew, Steve
Electronic health records (EHRs) contain extensive unstructured clinical data that can overwhelm emergency physicians trying to identify critical information. We present a two-stage summarization system that runs entirely on embedded devices, enabling offline clinical summarization while preserving patient privacy. In our approach, a dual-device architecture first retrieves relevant patient record sections using the Jetson Nano-R (Retrieve), then generates a structured summary on another Jetson Nano-S (Summarize), communicating via a lightweight socket link. The summarization output is two-fold: (1) a fixed-format list of critical findings, and (2) a context-specific narrative focused on the clinician's query. The retrieval stage uses locally stored EHRs, splits long notes into semantically coherent sections, and searches for the most relevant sections per query. The generation stage uses a locally hosted small language model (SLM) to produce the summary from the retrieved text, operating within the constraints of two NVIDIA Jetson devices. We first benchmarked six open-source SLMs under 7B parameters to identify viable models. We incorporated an LLM-as-Judge evaluation mechanism to assess summary quality in terms of factual accuracy, completeness, and clarity. Preliminary results on MIMIC-IV and de-identified real EHRs demonstrate that our fully offline system can effectively produce useful summaries in under 30 seconds.