Deep Learning
DeepLink: A Novel Link Prediction Framework based on Deep Learning
Keikha, Mohammad Mehdi, Rahgozar, Maseud, Asadpour, Masoud
Recently, link prediction has attracted more attentions from various disciplines such as computer science, bioinformatics and economics. In this problem, unknown links between nodes are discovered based on numerous information such as network topology, profile information and user generated contents. Most of the previous researchers have focused on the structural features of the networks. While the recent researches indicate that contextual information can change the network topology. Although, there are number of valuable researches which combine structural and content information, but they face with the scalability issue due to feature engineering. Because, majority of the extracted features are obtained by a supervised or semi supervised algorithm. Moreover, the existing features are not general enough to indicate good performance on different networks with heterogeneous structures. Besides, most of the previous researches are presented for undirected and unweighted networks. In this paper, a novel link prediction framework called "DeepLink" is presented based on deep learning techniques. In contrast to the previous researches which fail to automatically extract best features for the link prediction, deep learning reduces the manual feature engineering. In this framework, both the structural and content information of the nodes are employed. The framework can use different structural feature vectors, which are prepared by various link prediction methods. It considers all proximity orders that are presented in a network during the structural feature learning. We have evaluated the performance of DeepLink on two real social network datasets including Telegram and irBlogs. On both datasets, the proposed framework outperforms several structural and hybrid approaches for link prediction problem.
Detector monitoring with artificial neural networks at the CMS experiment at the CERN Large Hadron Collider
Pol, Adrian Alan, Cerminara, Gianluca, Germain, Cecile, Pierini, Maurizio, Seth, Agrima
Reliable data quality monitoring is a key asset in delivering collision data suitable for physics analysis in any modern large-scale High Energy Physics experiment. This paper focuses on the use of artificial neural networks for supervised and semi-supervised problems related to the identification of anomalies in the data collected by the CMS muon detectors. We use deep neural networks to analyze LHC collision data, represented as images organized geographically. We train a classifier capable of detecting the known anomalous behaviors with unprecedented efficiency and explore the usage of convolutional autoencoders to extend anomaly detection capabilities to unforeseen failure modes. A generalization of this strategy could pave the way to the automation of the data quality assessment process for present and future high-energy physics experiments.
DeepJDOT: Deep Joint Distribution Optimal Transport for Unsupervised Domain Adaptation
Damodaran, Bharath Bhushan, Kellenberger, Benjamin, Flamary, Rémi, Tuia, Devis, Courty, Nicolas
In computer vision, one is often confronted with problems of domain shifts, which occur when one applies a classifier trained on a source dataset to target data sharing similar characteristics (e.g. same classes), but also different latent data structures (e.g. different acquisition conditions). In such a situation, the model will perform poorly on the new data, since the classifier is specialized to recognize visual cues specific to the source domain. In this work we explore a solution, named DeepJDOT, to tackle this problem: through a measure of discrepancy on joint deep representations/labels based on optimal transport, we not only learn new data representations aligned between the source and target domain, but also simultaneously preserve the discriminative information used by the classifier. We applied DeepJDOT to a series of visual recognition tasks, where it compares favorably against state-of-the-art deep domain adaptation methods.
A Unified Approximation Framework for Deep Neural Networks
Ma, Yuzhe, Chen, Ran, Li, Wei, Shang, Fanhua, Yu, Wenjian, Cho, Minsik, Yu, Bei
Deep neural networks (DNNs) have achieved significant success in a variety of real world applications. However, tons of parameters in the networks restrict the efficiency of neural networks due to the large model size and the intensive computation. To address this issue, various compression and acceleration techniques have been investigated, among which low-rank filters and sparse filters are heavily studied. In this paper we propose a unified framework to compress the convolutional neural networks by combining these two strategies, while taking the nonlinear activation into consideration. The filer of a layer is approximated by the sum of a sparse component and a low-rank component, both of which are in favor of model compression. Especially, we constrain the sparse component to be structured sparse which facilitates acceleration. The performance of the network is retained by minimizing the reconstruction error of the feature maps after activation of each layer, using the alternating direction method of multipliers (ADMM). The experimental results show that our proposed approach can compress VGG-16 and AlexNet by over 4X. In addition, 2.2X and 1.1X speedup are achieved on VGG-16 and AlexNet, respectively, at a cost of less increase on error rate.
From Adversarial Training to Generative Adversarial Networks
In this paper, we are interested in two seemingly different concepts: \textit{adversarial training} and \textit{generative adversarial networks (GANs)}. Particularly, how these techniques help to improve each other. To this end, we analyze the limitation of adversarial training as the defense method, starting from questioning how well the robustness of a model can generalize. Then, we successfully improve the generalizability via data augmentation by the ``fake'' images sampled from generative adversarial networks. After that, we are surprised to see that the resulting robust classifier leads to a better generator, for free. We intuitively explain this interesting phenomenon and leave the theoretical analysis for future work. Motivated by these observations, we propose a system that combines generator, discriminator, and adversarial attacker in a single network. After end-to-end training and fine tuning, our method can simultaneously improve the robustness of classifiers, measured by accuracy under strong adversarial attacks; and the quality of generators, evaluated both aesthetically and quantitatively. In terms of the classifier, we achieve better robustness than the state-of-the-art adversarial training algorithm proposed in (Madry etla., 2017), while our generator achieves competitive performance compared with SN-GAN (Miyato and Koyama, 2018). Source code is publicly available online at \url{https://github.com/anonymous}.
Effectiveness of Scaled Exponentially-Regularized Linear Units (SERLUs)
Recently, self-normalizing neural networks (SNNs) have been proposed with the intention to avoid batch or weight normalization. The key step in SNNs is to properly scale the exponential linear unit (referred to as SELU) to inherently incorporate normalization based on central limit theory. SELU is a monotonically increasing function, where it has an approximately constant negative output for large negative input. In this work, we propose a new activation function to break the monotonicity property of SELU while still preserving the self-normalizing property. Differently from SELU, the new function introduces a bump-shaped function in the region of negative input by regularizing a linear function with a scaled exponential function, which is referred to as a scaled exponentially-regularized linear unit (SERLU). The bump-shaped function has approximately zero response to large negative input while being able to push the output of SERLU towards zero mean statistically. To effectively combat over-fitting, we develop a so-called shift-dropout for SERLU, which includes standard dropout as a special case. Experimental results on MNIST, CIFAR10 and CIFAR100 show that SERLU-based neural networks provide consistently promising results in comparison to other 5 activation functions including ELU, SELU, Swish, Leakly ReLU and ReLU.
A Comparison of Techniques for Language Model Integration in Encoder-Decoder Speech Recognition
Toshniwal, Shubham, Kannan, Anjuli, Chiu, Chung-Cheng, Wu, Yonghui, Sainath, Tara N, Livescu, Karen
Attention-based recurrent neural encoder-decoder models present an elegant solution to the automatic speech recognition problem. This approach folds the acoustic model, pronunciation model, and language model into a single network and requires only a parallel corpus of speech and text for training. However, unlike in conventional approaches that combine separate acoustic and language models, it is not clear how to use additional (unpaired) text. While there has been previous work on methods addressing this problem, a thorough comparison among methods is still lacking. In this paper, we compare a suite of past methods and some of our own proposed methods for using unpaired text data to improve encoder-decoder models. For evaluation, we use the medium-sized Switchboard data set and the large-scale Google voice search and dictation data sets. Our results confirm the benefits of using unpaired text across a range of methods and data sets. Surprisingly, for first-pass decoding, the rather simple approach of shallow fusion performs best across data sets. However, for Google data sets we find that cold fusion has a lower oracle error rate and outperforms other approaches after second-pass rescoring on the Google voice search data set.
Deep nested level sets: Fully automated segmentation of cardiac MR images in patients with pulmonary hypertension
Duan, Jinming, Schlemper, Jo, Bai, Wenjia, Dawes, Timothy J W, Bello, Ghalib, Doumou, Georgia, De Marvao, Antonio, O'Regan, Declan P, Rueckert, Daniel
In this paper we introduce a novel and accurate optimisation method for segmentation of cardiac MR (CMR) images in patients with pulmonary hypertension (PH). The proposed method explicitly takes into account the image features learned from a deep neural network. To this end, we estimate simultaneous probability maps over region and edge locations in CMR images using a fully convolutional network. Due to the distinct morphology of the heart in patients with PH, these probability maps can then be incorporated in a single nested level set optimisation framework to achieve multi-region segmentation with high efficiency. The proposed method uses an automatic way for level set initialisation and thus the whole optimisation is fully automated. We demonstrate that the proposed deep nested level set (DNLS) method outperforms existing state-of-the-art methods for CMR segmentation in PH patients.
Deep reinforcement learning for de novo drug design
We have devised and implemented a novel computational strategy for de novo design of molecules with desired properties termed ReLeaSE (Reinforcement Learning for Structural Evolution). On the basis of deep and reinforcement learning (RL) approaches, ReLeaSE integrates two deep neural networks--generative and predictive--that are trained separately but are used jointly to generate novel targeted chemical libraries. ReLeaSE uses simple representation of molecules by their simplified molecular-input line-entry system (SMILES) strings only. Generative models are trained with a stack-augmented memory network to produce chemically feasible SMILES strings, and predictive models are derived to forecast the desired properties of the de novo–generated compounds. In the first phase of the method, generative and predictive models are trained separately with a supervised learning algorithm. In the second phase, both models are trained jointly with the RL approach to bias the generation of new ...
Inverse molecular design using machine learning: Generative models for matter engineering
The discovery of new materials can bring enormous societal and technological progress. In this context, exploring completely the large space of potential materials is computationally intractable. Here, we review methods for achieving inverse design, which aims to discover tailored materials from the starting point of a particular desired functionality. Recent advances from the rapidly growing field of artificial intelligence, mostly from the subfield of machine learning, have resulted in a fertile exchange of ideas, where approaches to inverse molecular design are being proposed and employed at a rapid pace. Among these, deep generative models have been applied to numerous classes of materials: rational design of prospective drugs, synthetic routes to organic compounds, and optimization of photovoltaics and redox flow batteries, as well as a variety of other solid-state materials.