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 Deep Learning


Artificial Intelligence and Life Science

#artificialintelligence

Artificial intelligence, or AI, constitutes machine learning and deep learning, which enables computers to learn without being explicitly programmed every step of the way. This type of technology has shown to be very useful in life science industries, such as by sorting different types of cancer cells in laboratories. Naturally, technology, which both serves a function, and removes the need for explicit programming, will affect a host of jobs in the life science industry. There are several types of machine learning and deep learning, which are subcategories of AI. The basic principle dictates that AI is machine intelligence leading to the best outcome when given a problem.


DeepSphere: Efficient spherical Convolutional Neural Network with HEALPix sampling for cosmological applications

arXiv.org Artificial Intelligence

Convolutional Neural Networks (CNNs) are a cornerstone of the Deep Learning toolbox and have led to many breakthroughs in Artificial Intelligence. These networks have mostly been developed for regular Euclidean domains such as those supporting images, audio, or video. Because of their success, CNN-based methods are becoming increasingly popular in Cosmology. Cosmological data often comes as spherical maps, which make the use of the traditional CNNs more complicated. The commonly used pixelization scheme for spherical maps is the Hierarchical Equal Area isoLatitude Pixelisation (HEALPix). We present a spherical CNN for analysis of full and partial HEALPix maps, which we call DeepSphere. The spherical CNN is constructed by representing the sphere as a graph. Graphs are versatile data structures that can act as a discrete representation of a continuous manifold. Using the graph-based representation, we define many of the standard CNN operations, such as convolution and pooling. With filters restricted to being radial, our convolutions are equivariant to rotation on the sphere, and DeepSphere can be made invariant or equivariant to rotation. This way, DeepSphere is a special case of a graph CNN, tailored to the HEALPix sampling of the sphere. This approach is computationally more efficient than using spherical harmonics to perform convolutions. We demonstrate the method on a classification problem of weak lensing mass maps from two cosmological models and compare the performance of the CNN with that of two baseline classifiers. The results show that the performance of DeepSphere is always superior or equal to both of these baselines. For high noise levels and for data covering only a smaller fraction of the sphere, DeepSphere achieves typically 10% better classification accuracy than those baselines. Finally, we show how learned filters can be visualized to introspect the neural network.


Investigation of enhanced Tacotron text-to-speech synthesis systems with self-attention for pitch accent language

arXiv.org Machine Learning

ABSTRACT End-to-end speech synthesis is a promising approach that directly converts raw text to speech. Although it was shown that Tacotron2 outperforms classical pipeline systems with regards to naturalness in English, its applicability to other languages is still unknown. Japanese could be one of the most difficult languages for which to achieve end-to-end speech synthesis, largely due to its character diversity and pitch accents. Therefore, state-of-theart systems are still based on a traditional pipeline framework that requires a separate text analyzer and duration model. Towards endto-end Japanese speech synthesis, we extend Tacotron to systems with self-attention to capture long-term dependencies related to pitch accents and compare their audio quality with classical pipeline systems under various conditions to show their pros and cons. In a large-scale listening test, we investigated the impacts of the presence of accentual-type labels, the use of force or predicted alignments, and acoustic features used as local condition parameters of the Wavenet vocoder. Our results reveal that although the proposed systems still do not match the quality of a top-line pipeline system for Japanese, we show important stepping stones towards end-to-end Japanese speech synthesis. Index Terms-- speech synthesis, deep learning, Tacotron 1. INTRODUCTION Tacotron [1] opened a novel path to end-to-end speech synthesis.


Compositional coding capsule network with k-means routing for text classification

arXiv.org Machine Learning

Text classification is a challenging problem which aims to identify the category of texts. Recently, Capsule Networks (CapsNets) are proposed for image classification. It has been shown that CapsNets have several advantages over Convolutional Neural Networks (CNNs), while, their validity in the domain of text has less been explored. An effective method named deep compositional code learning has been proposed lately. This method can save many parameters about word embeddings without any significant sacrifices in performance. In this paper, we introduce the Compositional Coding (CC) mechanism between capsules, and we propose a new routing algorithm, which is based on k-means clustering theory. Experiments conducted on eight challenging text classification datasets show the proposed method achieves competitive accuracy compared to the state-of-the-art approach with significantly fewer parameters.


Semi-unsupervised Learning of Human Activity using Deep Generative Models

arXiv.org Machine Learning

Here we demonstrate a new deep generative model for classification. We introduce `semi-unsupervised learning', a problem regime related to transfer learning and zero/few shot learning where, in the training data, some classes are sparsely labelled and others entirely unlabelled. Models able to learn from training data of this type are potentially of great use, as many medical datasets are `semi-unsupervised'. Our model demonstrates superior semi-unsupervised classification performance on MNIST to model M2 from Kingma and Welling (2014). We apply the model to human accelerometer data, performing activity classification and structure discovery on windows of time series data.


Median activation functions for graph neural networks

arXiv.org Machine Learning

Graph neural networks (GNNs) have been shown to replicate convolutional neural networks' (CNNs) superior performance in many problems involving graphs. By replacing regular convolutions with linear shift-invariant graph filters (LSI-GFs), GNNs take into account the (irregular) structure of the graph and provide meaningful representations of network data. However, LSI-GFs fail to encode local nonlinear graph signal behavior, and so do regular activation functions, which are nonlinear but pointwise. To address this issue, we propose median activation functions with support on graph neighborhoods instead of individual nodes. A GNN architecture with a trainable multirresolution version of this activation function is then tested on synthetic and real-word datasets, where we show that median activation functions can improve GNN capacity with marginal increase in complexity.


Learning to Teach with Dynamic Loss Functions

arXiv.org Artificial Intelligence

Teaching is critical to human society: it is with teaching that prospective students are educated and human civilization can be inherited and advanced. A good teacher not only provides his/her students with qualified teaching materials (e.g., textbooks), but also sets up appropriate learning objectives (e.g., course projects and exams) considering different situations of a student. When it comes to artificial intelligence, treating machine learning models as students, the loss functions that are optimized act as perfect counterparts of the learning objective set by the teacher. In this work, we explore the possibility of imitating human teaching behaviors by dynamically and automatically outputting appropriate loss functions to train machine learning models. Different from typical learning settings in which the loss function of a machine learning model is predefined and fixed, in our framework, the loss function of a machine learning model (we call it student) is defined by another machine learning model (we call it teacher). The ultimate goal of teacher model is cultivating the student to have better performance measured on development dataset. Towards that end, similar to human teaching, the teacher, a parametric model, dynamically outputs different loss functions that will be used and optimized by its student model at different training stages. We develop an efficient learning method for the teacher model that makes gradient based optimization possible, exempt of the ineffective solutions such as policy optimization. We name our method as "learning to teach with dynamic loss functions" (L2T-DLF for short). Extensive experiments on real world tasks including image classification and neural machine translation demonstrate that our method significantly improves the quality of various student models.


A Closer Look at Deep Learning Heuristics: Learning rate restarts, Warmup and Distillation

arXiv.org Machine Learning

The convergence rate and final performance of common deep learning models have significantly benefited from heuristics such as learning rate schedules, knowledge distillation, skip connections, and normalization layers. In the absence of theoretical underpinnings, controlled experiments aimed at explaining these strategies can aid our understanding of deep learning landscapes and the training dynamics. Existing approaches for empirical analysis rely on tools of linear interpolation and visualizations with dimensionality reduction, each with their limitations. Instead, we revisit such analysis of heuristics through the lens of recently proposed methods for loss surface and representation analysis, viz., mode connectivity and canonical correlation analysis (CCA), and hypothesize reasons for the success of the heuristics. In particular, we explore knowledge distillation and learning rate heuristics of (cosine) restarts and warmup using mode connectivity and CCA. Our empirical analysis suggests that: (a) the reasons often quoted for the success of cosine annealing are not evidenced in practice; (b) that the effect of learning rate warmup is to prevent the deeper layers from creating training instability; and (c) that the latent knowledge shared by the teacher is primarily disbursed to the deeper layers. The introduction of heuristics such as normalization layers (Ioffe & Szegedy, 2015; Ba et al., 2016), residual connections (He et al., 2016), and learning rate strategies (Loshchilov & Hutter, 2016; Goyal et al., 2017; Smith, 2017) have greatly accelerated progress in Deep Learning.


Differentiable Greedy Networks

arXiv.org Machine Learning

Optimal selection of a subset of items from a given set is a hard problem that requires combinatorial optimization. In this paper, we propose a subset selection algorithm that is trainable with gradient based methods yet achieves near optimal performance via submodular optimization. We focus on the task of identifying a relevant set of sentences for claim verification in the context of the FEVER task. Conventional methods for this task look at sentences on their individual merit and thus do not optimize the informativeness of sentences as a set. We show that our proposed method which builds on the idea of unfolding a greedy algorithm into a computational graph allows both interpretability and gradient based training. The proposed differentiable greedy network (DGN) outperforms discrete optimization algorithms as well as other baseline methods in terms of precision and recall. In this paper, we develop a subset selection algorithm that is differentiable and discrete, which can be trained on supervised data and can model complex dependencies between elements in a straightforward and comprehensible way. This is of particular interest in natural language processing tasks such as fact extraction, fact verification, and question answering where the proposed optimization scheme can be used for evidence retrieval.


Assessing Generalization in Deep Reinforcement Learning

arXiv.org Artificial Intelligence

Deep reinforcement learning (RL) has achieved breakthrough results on many tasks, but has been shown to be sensitive to system changes at test time. As a result, building deep RL agents that generalize has become an active research area. Our aim is to catalyze and streamline community-wide progress on this problem by providing the first benchmark and a common experimental protocol for investigating generalization in RL. Our benchmark contains a diverse set of environments and our evaluation methodology covers both in-distribution and out-of-distribution generalization. To provide a set of baselines for future research, we conduct a systematic evaluation of deep RL algorithms, including those that specifically tackle the problem of generalization.