The automatic development of phenotype algorithms from Electronic Health Record data with machine learning (ML) techniques is of great interest given the current practice is very time-consuming and resource intensive. The extraction of design patterns from phenotype algorithms is essential to understand their rationale and standard, with great potential to automate the development process. In this pilot study, we perform network visualization on the design patterns and their associations with phenotypes and sites. We classify design patterns using the fragments from previously annotated phenotype algorithms as the ground truth. The classification performance is used as a proxy for coherence at the attribution level. The bag-of-words representation with knowledge-based features generated a good performance in the classification task (0.79 macro-f1 scores). Good classification accuracy with simple features demonstrated the attribution coherence and the feasibility of automatic identification of design patterns. Our results point to both the feasibility and challenges of automatic identification of phenotyping design patterns, which would power the automatic development of phenotype algorithms.

Neural network-based Open-ended conversational agents automatically generate responses based on predictive models learned from a large number of pairs of utterances. The generated responses are typically acceptable as a sentence but are often dull, generic, and certainly devoid of any emotion. In this paper, we present neural models that learn to express a given emotion in the generated response. We propose four models and evaluate them against 3 baselines. An encoder-decoder framework-based model with multiple attention layers provides the best overall performance in terms of expressing the required emotion. While it does not outperform other models on all emotions, it presents promising results in most cases.

In multi-label text classification, each textual document can be assigned with one or more labels. Due to this nature, the multi-label text classification task is often considered to be more challenging compared to the binary or multi-class text classification problems. As an important task with broad applications in biomedicine such as assigning diagnosis codes, a number of different computational methods (e.g. training and combining binary classifiers for each label) have been proposed in recent years. However, many suffered from modest accuracy and efficiency, with only limited success in practical use. We propose ML-Net, a novel deep learning framework, for multi-label classification of biomedical texts. As an end-to-end system, ML-Net combines a label prediction network with an automated label count prediction mechanism to output an optimal set of labels by leveraging both predicted confidence score of each label and the contextual information in the target document. We evaluate ML-Net on three independent, publicly-available corpora in two kinds of text genres: biomedical literature and clinical notes. For evaluation, example-based measures such as precision, recall and f-measure are used. ML-Net is compared with several competitive machine learning baseline models. Our benchmarking results show that ML-Net compares favorably to the state-of-the-art methods in multi-label classification of biomedical texts. ML-NET is also shown to be robust when evaluated on different text genres in biomedicine. Unlike traditional machine learning methods, ML-Net does not require human efforts in feature engineering and is highly efficient and scalable approach to tasks with a large set of labels (no need to build individual classifiers for each separate label). Finally, ML-NET is able to dynamically estimate the label count based on the document context in a more systematic and accurate manner.

Unsupervised representation learning has succeeded with excellent results in many applications. It is an especially powerful tool to learn a good representation of environments with partial or noisy observations. In partially observable domains it is important for the representation to encode a belief state, a sufficient statistic of the observations seen so far. In this paper, we investigate whether it is possible to learn such a belief representation using modern neural architectures. Specifically, we focus on one-step frame prediction and two variants of contrastive predictive coding (CPC) as the objective functions to learn the representations. To evaluate these learned representations, we test how well they can predict various pieces of information about the underlying state of the environment, e.g., position of the agent in a 3D maze. We show that all three methods are able to learn belief representations of the environment, they encode not only the state information, but also its uncertainty, a crucial aspect of belief states. We also find that for CPC multi-step predictions and action-conditioning are critical for accurate belief representations in visually complex environments. The ability of neural representations to capture the belief information has the potential to spur new advances for learning and planning in partially observable domains, where leveraging uncertainty is essential for optimal decision making.

Knowledge tracing is a sequence prediction problem where the goal is to predict the outcomes of students over questions as they are interacting with a learning platform. By tracking the evolution of the knowledge of some student, one can optimize instruction. Existing methods are either based on temporal latent variable models, or factor analysis with temporal features. We here show that factorization machines (FMs), a model for regression or classification, encompasses several existing models in the educational literature as special cases, notably additive factor model, performance factor model, and multidimensional item response theory. We show, using several real datasets of tens of thousands of users and items, that FMs can estimate student knowledge accurately and fast even when student data is sparsely observed, and handle side information such as multiple knowledge components and number of attempts at item or skill level. Our approach allows to fit student models of higher dimension than existing models, and provides a testbed to try new combinations of features in order to improve existing models.

Long Short-Term Memory (LSTM) is a well-known method used widely on sequence learning and time series prediction. In this paper we deployed stacked LSTM model in an application of weather forecasting. We propose a 2-layer spatio-temporal stacked LSTM model which consists of independent LSTM models per location in the first LSTM layer. Subsequently, the input of the second LSTM layer is formed based on the combination of the hidden states of the first layer LSTM models. The experiments show that by utilizing the spatial information the prediction performance of the stacked LSTM model improves in most of the cases.

Abstract-- Automatic voice-controlled systems have changed the way humans interact with a computer. Voice or speech recognition systems allow a user to make a hands-free request to the computer, which in turn processes the request and serves the user with appropriate responses. After years of research and developments in machine learning and artificial intelligence, today voice-controlled technologies have become more efficient and are widely applied in many domains to enable and improve human-tohuman andhuman-to-computer interactions. The state-of-the-art e-commerce applications with the help of web technologies offer interactive and user-friendly interfaces. However, there are some instances where people, especially with visual disabilities, are not able to fully experience the serviceability of such applications. A voice-controlled system embedded in a web application can enhance user experience and can provide voice as a means to control the functionality of e-commerce websites. In this paper, we propose a taxonomy of speech recognition systems (SRS) and present a voice-controlled commodity purchase e-commerce application using IBM Watson speech-to-text to demonstrate its usability. The prototype can be extended to other application scenarios such as government service kiosks and enable analytics of the converted text data for scenarios such as medical diagnosis at the clinics. I. INTRODUCTION Voice recognition is used interchangeably with speech recognition, however, voice recognition is primarily the task of determining the identity of a speaker rather than the content of the speaker's speech [1].

We propose an efficient end-to-end convolutional neural network architecture, AclNet, for audio classification. When trained with our data augmentation and regularization, we achieved state-of-the-art performance on the ESC-50 corpus with 85:65% accuracy. Our network allows configurations such that memory and compute requirements are drastically reduced, and a tradeoff analysis of accuracy and complexity is presented. The analysis shows high accuracy at significantly reduced computational complexity compared to existing solutions. For example, a configuration with only 155k parameters and 49:3 million multiply-adds per second is 81:75%, exceeding human accuracy of 81:3%. This improved efficiency can enable always-on inference in energy-efficient platforms.

Understanding and accurately predicting within-field spatial variability of crop yield play a key role in site-specific management of crop inputs such as irrigation water and fertilizer for optimized crop production. However, such a task is challenged by the complex interaction between crop growth and environmental and managerial factors, such as climate, soil conditions, tillage, and irrigation. In this paper, we present a novel Spatial-temporal Multi-Task Learning algorithms for within-field crop yield prediction in west Texas from 2001 to 2003. This algorithm integrates multiple heterogeneous data sources to learn different features simultaneously, and to aggregate spatial-temporal features by introducing a weighted regularizer to the loss functions. Our comprehensive experimental results consistently outperform the results of other conventional methods, and suggest a promising approach, which improves the landscape of crop prediction research fields.

We propose a tensor neural network ($t$-NN) framework that offers an exciting new paradigm for designing neural networks with multidimensional (tensor) data. Our network architecture is based on the $t$-product (Kilmer and Martin, 2011), an algebraic formulation to multiply tensors via circulant convolution. In this $t$-product algebra, we interpret tensors as $t$-linear operators analogous to matrices as linear operators, and hence our framework inherits mimetic matrix properties. To exemplify the elegant, matrix-mimetic algebraic structure of our $t$-NNs, we expand on recent work (Haber and Ruthotto, 2017) which interprets deep neural networks as discretizations of non-linear differential equations and introduces stable neural networks which promote superior generalization. Motivated by this dynamic framework, we introduce a stable $t$-NN which facilitates more rapid learning because of its reduced, more powerful parameterization. Through our high-dimensional design, we create a more compact parameter space and extract multidimensional correlations otherwise latent in traditional algorithms. We further generalize our $t$-NN framework to a family of tensor-tensor products (Kernfeld, Kilmer, and Aeron, 2015) which still induce a matrix-mimetic algebraic structure. Through numerical experiments on the MNIST and CIFAR-10 datasets, we demonstrate the more powerful parameterizations and improved generalizability of stable $t$-NNs.