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 Deep Learning


Does Bigger Mean Better? Comparitive Analysis of CNNs and Biomedical Vision Language Modles in Medical Diagnosis

arXiv.org Artificial Intelligence

The accurate interpretation of chest radiographs using automated methods is a critical task in medical imaging. This paper presents a comparative analysis between a supervised lightweight Convolutional Neural Network (CNN) and a state-of-the-art, zero-shot medical Vision-Language Model (VLM), BiomedCLIP, across two distinct diagnostic tasks: pneumonia detection on the PneumoniaMNIST benchmark and tuberculosis detection on the Shenzhen TB dataset. Our experiments show that supervised CNNs serve as highly competitive baselines in both cases. While the default zero-shot performance of the VLM is lower, we demonstrate that its potential can be unlocked via a simple yet crucial remedy: decision threshold calibration. By optimizing the classification threshold on a validation set, the performance of BiomedCLIP is significantly boosted across both datasets. For pneumonia detection, calibration enables the zero-shot VLM to achieve a superior F1-score of 0.8841, surpassing the supervised CNN's 0.8803. For tuberculosis detection, calibration dramatically improves the F1-score from 0.4812 to 0.7684, bringing it close to the supervised baseline's 0.7834. This work highlights a key insight: proper calibration is essential for leveraging the full diagnostic power of zero-shot VLMs, enabling them to match or even outperform efficient, task-specific supervised models.


MSCoD: An Enhanced Bayesian Updating Framework with Multi-Scale Information Bottleneck and Cooperative Attention for Structure-Based Drug Design

arXiv.org Artificial Intelligence

Structure-Based Drug Design (SBDD) is a powerful strategy in computational drug discovery, utilizing three-dimensional protein structures to guide the design of molecules with improved binding affinity. However, capturing complex protein-ligand interactions across multiple scales remains challenging, as current methods often overlook the hierarchical organization and intrinsic asymmetry of these interactions. To address these limitations, we propose MSCoD, a novel Bayesian updating-based generative framework for structure-based drug design. In our MSCoD, Multi-Scale Information Bottleneck (MSIB) was developed, which enables semantic compression at multiple abstraction levels for efficient hierarchical feature extraction. Furthermore, a multi-head cooperative attention (MHCA) mechanism was developed, which employs asymmetric protein-to-ligand attention to capture diverse interaction types while addressing the dimensionality disparity between proteins and ligands. Empirical studies showed that MSCoD outperforms state-of-the-art methods on the benchmark dataset. Its real-world applicability is confirmed by case studies on difficult targets like KRAS G12D (7XKJ). Additionally, the MSIB and MHCA modules prove transferable, boosting the performance of GraphDTA on standard drug target affinity prediction benchmarks (Davis and Kiba). The code and data underlying this article are freely available at https://github.com/xulong0826/MSCoD.


Echo Flow Networks

arXiv.org Artificial Intelligence

At the heart of time-series forecasting (TSF) lies a fundamental challenge: how can models efficiently and effectively capture long-range temporal dependencies across ever-growing sequences? While deep learning has brought notable progress, conventional architectures often face a trade-off between computational complexity and their ability to retain accumulative information over extended horizons. Echo State Networks (ESNs), a class of reservoir computing models, have recently regained attention for their exceptional efficiency, offering constant memory usage and per-step training complexity regardless of input length. This makes them particularly attractive for modeling extremely long-term event history in TSF. However, traditional ESNs fall short of state-of-the-art performance due to their limited nonlinear capacity, which constrains both their expressiveness and stability. We introduce Echo Flow Networks (EFNs), a framework composed of a group of extended Echo State Networks (X-ESNs) with MLP readouts, enhanced by our novel Matrix-Gated Composite Random Activation (MCRA), which enables complex, neuron-specific temporal dynamics, significantly expanding the network's representational capacity without compromising computational efficiency. In addition, we propose a dual-stream architecture in which recent input history dynamically selects signature reservoir features from an infinite-horizon memory, leading to improved prediction accuracy and long-term stability. Extensive evaluations on five benchmarks demonstrate that EFNs achieve up to 4x faster training and 3x smaller model size compared to leading methods like PatchTST, reducing forecasting error from 43% to 35%, a 20% relative improvement. One instantiation of our framework, EchoFormer, consistently achieves new state-of-the-art performance across five benchmark datasets: ETTh, ETTm, DMV, Weather, and Air Quality.


Fine-Grained Uncertainty Decomposition in Large Language Models: A Spectral Approach

arXiv.org Artificial Intelligence

As Large Language Models (LLMs) are increasingly integrated in diverse applications, obtaining reliable measures of their predictive uncertainty has become critically important. A precise distinction between aleatoric uncertainty, arising from inherent ambiguities within input data, and epistemic uncertainty, originating exclusively from model limitations, is essential to effectively address each uncertainty source. In this paper, we introduce Spectral Uncertainty, a novel approach to quantifying and decomposing uncertainties in LLMs. Leveraging the V on Neumann entropy from quantum information theory, Spectral Uncertainty provides a rigorous theoretical foundation for separating total uncertainty into distinct aleatoric and epistemic components. Unlike existing baseline methods, our approach incorporates a fine-grained representation of semantic similarity, enabling nuanced differentiation among various semantic interpretations in model responses. Empirical evaluations demonstrate that Spectral Uncertainty outperforms state-of-the-art methods in estimating both aleatoric and total uncertainty across diverse models and benchmark datasets.


MASt3R-Fusion: Integrating Feed-Forward Visual Model with IMU, GNSS for High-Functionality SLAM

arXiv.org Artificial Intelligence

Visual SLAM is a cornerstone technique in robotics, autonomous driving and extended reality (XR), yet classical systems often struggle with low-texture environments, scale ambiguity, and degraded performance under challenging visual conditions. Recent advancements in feed-forward neural network-based pointmap regression have demonstrated the potential to recover high-fidelity 3D scene geometry directly from images, leveraging learned spatial priors to overcome limitations of traditional multi-view geometry methods. However, the widely validated advantages of probabilistic multi-sensor information fusion are often discarded in these pipelines. In this work, we propose MASt3R-Fusion,a multi-sensor-assisted visual SLAM framework that tightly integrates feed-forward pointmap regression with complementary sensor information, including inertial measurements and GNSS data. The system introduces Sim(3)-based visualalignment constraints (in the Hessian form) into a universal metric-scale SE(3) factor graph for effective information fusion. A hierarchical factor graph design is developed, which allows both real-time sliding-window optimization and global optimization with aggressive loop closures, enabling real-time pose tracking, metric-scale structure perception and globally consistent mapping. We evaluate our approach on both public benchmarks and self-collected datasets, demonstrating substantial improvements in accuracy and robustness over existing visual-centered multi-sensor SLAM systems. The code will be released open-source to support reproducibility and further research (https://github.com/GREAT-WHU/MASt3R-Fusion).


VIR-Bench: Evaluating Geospatial and Temporal Understanding of MLLMs via Travel Video Itinerary Reconstruction

arXiv.org Artificial Intelligence

Recent advances in multimodal large language models (MLLMs) have significantly enhanced video understanding capabilities, opening new possibilities for practical applications. Yet current video benchmarks focus largely on indoor scenes or short-range outdoor activities, leaving the challenges associated with long-distance travel largely unexplored. Mastering extended geospatial-temporal trajectories is critical for next-generation MLLMs, underpinning real-world tasks such as embodied-AI planning and navigation. To bridge this gap, we present VIR-Bench, a novel benchmark consisting of 200 travel videos that frames itinerary reconstruction as a challenging task designed to evaluate and push forward MLLMs' geospatial-temporal intelligence. Experimental results reveal that state-of-the-art MLLMs, including proprietary ones, struggle to achieve high scores, underscoring the difficulty of handling videos that span extended spatial and temporal scales. Moreover, we conduct an in-depth case study in which we develop a prototype travel-planning agent that leverages the insights gained from VIR-Bench. The agent's markedly improved itinerary recommendations verify that our evaluation protocol not only benchmarks models effectively but also translates into concrete performance gains in user-facing applications.


A Neural Network for the Identical Kuramoto Equation: Architectural Considerations and Performance Evaluation

arXiv.org Artificial Intelligence

In this paper, we investigate the efficiency of Deep Neural Networks (DNNs) to approximate the solution of a nonlocal conservation law derived from the identical-oscillator Kuramoto model, focusing on the evaluation of an architectural choice and its impact on solution accuracy based on the energy norm and computation time. Through systematic experimentation, we demonstrate that network configuration parameters-specifically, activation function selection (tanh vs. sin vs. ReLU), network depth (4-8 hidden layers), width (64-256 neurons), and training methodology (collocation points, epoch count)-significantly influence convergence characteristics. We observe that tanh activation yields stable convergence across configurations, whereas sine activation can attain marginally lower errors and training times in isolated cases, but occasionally produce nonphysical artefacts. Our comparative analysis with traditional numerical methods shows that optimally configured DNNs offer competitive accuracy with notably different computational trade-offs. Furthermore, we identify fundamental limitations of standard feed-forward architectures when handling singular or piecewise-constant solutions, providing empirical evidence that such networks inherently oversmooth sharp features due to the natural function space limitations of standard activation functions. This work contributes to the growing body of research on neural network-based scientific computing by providing practitioners with empirical guidelines for DNN implementation while illuminating fundamental theoretical constraints that must be overcome to expand their applicability to more challenging physical systems with discontinuities.


MedFact: Benchmarking the Fact-Checking Capabilities of Large Language Models on Chinese Medical Texts

arXiv.org Artificial Intelligence

Deploying Large Language Models (LLMs) in medical applications requires fact-checking capabilities to ensure patient safety and regulatory compliance. We introduce MedFact, a challenging Chinese medical fact-checking benchmark with 2,116 expert-annotated instances from diverse real-world texts, spanning 13 specialties, 8 error types, 4 writing styles, and 5 difficulty levels. Construction uses a hybrid AI-human framework where iterative expert feedback refines AI-driven, multi-criteria filtering to ensure high quality and difficulty. We evaluate 20 leading LLMs on veracity classification and error localization, and results show models often determine if text contains errors but struggle to localize them precisely, with top performers falling short of human performance. Our analysis reveals the "over-criticism" phenomenon, a tendency for models to misidentify correct information as erroneous, which can be exacerbated by advanced reasoning techniques such as multi-agent collaboration and inference-time scaling. MedFact highlights the challenges of deploying medical LLMs and provides resources to develop factually reliable medical AI systems.


A GPU-Accelerated RAG-Based Telegram Assistant for Supporting Parallel Processing Students

arXiv.org Artificial Intelligence

This project addresses a critical pedagogical need: offering students continuous, on-demand academic assistance beyond conventional reception hours. I present a domain-specific Retrieval-Augmented Generation (RAG) system powered by a quantized Mistral-7B Instruct model and deployed as a Telegram bot. The assistant enhances learning by delivering real-time, personalized responses aligned with the "Introduction to Parallel Processing" course materials. GPU acceleration significantly improves inference latency, enabling practical deployment on consumer hardware. This approach demonstrates how consumer GPUs can enable affordable, private, and effective AI tutoring for HPC education.


Realism Control One-step Diffusion for Real-World Image Super-Resolution

arXiv.org Artificial Intelligence

Pre-trained diffusion models have shown great potential in real-world image super-resolution (Real-ISR) tasks by enabling high-resolution reconstructions. While one-step diffusion (OSD) methods significantly improve efficiency compared to traditional multi-step approaches, they still have limitations in balancing fidelity and realism across diverse scenarios. Since the OSDs for SR are usually trained or distilled by a single timestep, they lack flexible control mechanisms to adaptively prioritize these competing objectives, which are inherently manageable in multi-step methods through adjusting sampling steps. To address this challenge, we propose a Realism Controlled One-step Diffusion (RCOD) framework for Real-ISR. RCOD provides a latent domain grouping strategy that enables explicit control over fidelity-realism trade-offs during the noise prediction phase with minimal training paradigm modifications and original training data. A degradation-aware sampling strategy is also introduced to align distillation regularization with the grouping strategy and enhance the controlling of trade-offs. Moreover, a visual prompt injection module is used to replace conventional text prompts with degradation-aware visual tokens, enhancing both restoration accuracy and semantic consistency. Our method achieves superior fidelity and perceptual quality while maintaining computational efficiency. Extensive experiments demonstrate that RCOD outperforms state-of-the-art OSD methods in both quantitative metrics and visual qualities, with flexible realism control capabilities in the inference stage.