Deep Learning
Last Week in AI
Every week, Invector Labs publishes a newsletter that covers the most recent developments in AI research and technology. You can find this week's issue below. You can sign up for it below. Vision and language are two of the fundamental pillars of human cognition. Since we are babies, vision and language are intrinsically related as we try to describe objects or create visual representation of a verbal description.
Bias in AI: A Primer - KDnuggets
Bias in AI is as important now as it ever has been; it has always been an important topic, but it seems to be getting more attention as time goes on, attention it rightfully deserves. No longer an afterthought in relevant courseware and texts, AI bias and the related concepts of ethics, inclusion, and diversity are core and early topics in courses such as Stanford's CS224n: Natural Language Processing with Deep Learning, and the upcoming book from the Fast.ai Aside from the gradually-increasing interest and inclusion of AI bias and ethics concerns from and by a wide variety of practitioners in their daily work, numerous researchers today are making a focused and very conscious impact as well. Margaret Mitchell is one such researcher working in this area. Mitchell (@mmitchell_ai) is a Senior Research Scientist in Google's Research & Machine Intelligence group.
Deep DIH : Statistically Inferred Reconstruction of Digital In-Line Holography by Deep Learning
Li, Huayu, Chen, Xiwen, Wu, Haiyu, Chi, Zaoyi, Mann, Christopher, Razi, Abolfazl
Digital in-line holography is commonly used to reconstruct 3D images from 2D holograms for microscopic objects. One of the technical challenges that arise in the signal processing stage is removing the twin image that is caused by the phase-conjugate wavefront from the recorded holograms. Twin image removal is typically formulated as a non-linear inverse problem due to the irreversible scattering process when generating the hologram. Recently, end-to-end deep learning-based methods have been utilized to reconstruct the object wavefront (as a surrogate for the 3D structure of the object) directly from a single-shot in-line digital hologram. However, massive data pairs are required to train deep learning models for acceptable reconstruction precision. In contrast to typical image processing problems, well-curated datasets for in-line digital holography does not exist. Also, the trained model highly influenced by the morphological properties of the object and hence can vary for different applications. Therefore, data collection can be prohibitively cumbersome in practice as a major hindrance to using deep learning for digital holography. In this paper, we proposed a novel implementation of autoencoder-based deep learning architecture for single-shot hologram reconstruction solely based on the current sample without the need for massive datasets to train the model. The simulations results demonstrate the superior performance of the proposed method compared to the state of the art single-shot compressive digital in-line hologram reconstruction method.
Minimal Variance Sampling with Provable Guarantees for Fast Training of Graph Neural Networks
Cong, Weilin, Forsati, Rana, Kandemir, Mahmut, Mahdavi, Mehrdad
Sampling methods (e.g., node-wise, layer-wise, or subgraph) has become an indispensable strategy to speed up training large-scale Graph Neural Networks (GNNs). However, existing sampling methods are mostly based on the graph structural information and ignore the dynamicity of optimization, which leads to high variance in estimating the stochastic gradients. The high variance issue can be very pronounced in extremely large graphs, where it results in slow convergence and poor generalization. In this paper, we theoretically analyze the variance of sampling methods and show that, due to the composite structure of empirical risk, the variance of any sampling method can be decomposed into \textit{embedding approximation variance} in the forward stage and \textit{stochastic gradient variance} in the backward stage that necessities mitigating both types of variance to obtain faster convergence rate. We propose a decoupled variance reduction strategy that employs (approximate) gradient information to adaptively sample nodes with minimal variance, and explicitly reduces the variance introduced by embedding approximation. We show theoretically and empirically that the proposed method, even with smaller mini-batch sizes, enjoys a faster convergence rate and entails a better generalization compared to the existing methods.
Crop Yield Prediction Integrating Genotype and Weather Variables Using Deep Learning
Shook, Johnathon, Gangopadhyay, Tryambak, Wu, Linjiang, Ganapathysubramanian, Baskar, Sarkar, Soumik, Singh, Asheesh K.
Accurate prediction of crop yield supported by scientific and domain-relevant insights, can help improve agricultural breeding, provide monitoring across diverse climatic conditions and thereby protect against climatic challenges to crop production including erratic rainfall and temperature variations. We used historical performance records from Uniform Soybean Tests (UST) in North America spanning 13 years of data to build a Long Short Term Memory - Recurrent Neural Network based model to dissect and predict genotype response in multiple-environments by leveraging pedigree relatedness measures along with weekly weather parameters. Additionally, for providing explainability of the important time-windows in the growing season, we developed a model based on temporal attention mechanism. The combination of these two models outperformed random forest (RF), LASSO regression and the data-driven USDA model for yield prediction. We deployed this deep learning framework as a 'hypotheses generation tool' to unravel GxExM relationships. Attention-based time series models provide a significant advancement in interpretability of yield prediction models. The insights provided by explainable models are applicable in understanding how plant breeding programs can adapt their approaches for global climate change, for example identification of superior varieties for commercial release, intelligent sampling of testing environments in variety development, and integrating weather parameters for a targeted breeding approach. Using DL models as hypothesis generation tools will enable development of varieties with plasticity response in variable climatic conditions. We envision broad applicability of this approach (via conducting sensitivity analysis and "what-if" scenarios) for soybean and other crop species under different climatic conditions.
Graphs, Entities, and Step Mixture
Shin, Kyuyong, Shin, Wonyoung, Ha, Jung-Woo, Kwon, Sunyoung
Existing approaches for graph neural networks commonly suffer from the oversmoothing issue, regardless of how neighborhoods are aggregated. Most methods also focus on transductive scenarios for fixed graphs, leading to poor generalization for unseen graphs. To address these issues, we propose a new graph neural network that considers both edge-based neighborhood relationships and node-based entity features, i.e. Graph Entities with Step Mixture via random walk (GESM). GESM employs a mixture of various steps through random walk to alleviate the oversmoothing problem, attention to dynamically reflect interrelations depending on node information, and structure-based regularization to enhance embedding representation. With intensive experiments, we show that the proposed GESM achieves state-of-the-art or comparable performances on eight benchmark graph datasets comprising transductive and inductive learning tasks. Furthermore, we empirically demonstrate the significance of considering global information.
The NetHack Learning Environment
Küttler, Heinrich, Nardelli, Nantas, Miller, Alexander H., Raileanu, Roberta, Selvatici, Marco, Grefenstette, Edward, Rocktäschel, Tim
Progress in Reinforcement Learning (RL) algorithms goes hand-in-hand with the development of challenging environments that test the limits of current methods. While existing RL environments are either sufficiently complex or based on fast simulation, they are rarely both. Here, we present the NetHack Learning Environment (NLE), a scalable, procedurally generated, stochastic, rich, and challenging environment for RL research based on the popular single-player terminal-based roguelike game, NetHack. We argue that NetHack is sufficiently complex to drive long-term research on problems such as exploration, planning, skill acquisition, and language-conditioned RL, while dramatically reducing the computational resources required to gather a large amount of experience. We compare NLE and its task suite to existing alternatives, and discuss why it is an ideal medium for testing the robustness and systematic generalization of RL agents. We demonstrate empirical success for early stages of the game using a distributed Deep RL baseline and Random Network Distillation exploration, alongside qualitative analysis of various agents trained in the environment. NLE is open source at https://github.com/facebookresearch/nle.
DeepMnemonic: Password Mnemonic Generation via Deep Attentive Encoder-Decoder Model
Cheng, Yao, Xu, Chang, Hai, Zhen, Li, Yingjiu
Strong passwords are fundamental to the security of password-based user authentication systems. In recent years, much effort has been made to evaluate password strength or to generate strong passwords. Unfortunately, the usability or memorability of the strong passwords has been largely neglected. In this paper, we aim to bridge the gap between strong password generation and the usability of strong passwords. We propose to automatically generate textual password mnemonics, i.e., natural language sentences, which are intended to help users better memorize passwords. We introduce \textit{DeepMnemonic}, a deep attentive encoder-decoder framework which takes a password as input and then automatically generates a mnemonic sentence for the password. We conduct extensive experiments to evaluate DeepMnemonic on the real-world data sets. The experimental results demonstrate that DeepMnemonic outperforms a well-known baseline for generating semantically meaningful mnemonic sentences. Moreover, the user study further validates that the generated mnemonic sentences by DeepMnemonic are useful in helping users memorize strong passwords.
Generative causal explanations of black-box classifiers
O'Shaughnessy, Matthew, Canal, Gregory, Connor, Marissa, Davenport, Mark, Rozell, Christopher
We develop a method for generating causal post-hoc explanations of black-box classifiers based on a learned low-dimensional representation of the data. The explanation is causal in the sense that changing learned latent factors produces a change in the classifier output statistics. To construct these explanations, we design a learning framework that leverages a generative model and information-theoretic measures of causal influence. Our objective function encourages both the generative model to faithfully represent the data distribution and the latent factors to have a large causal influence on the classifier output. Our method learns both global and local explanations, is compatible with any classifier that admits class probabilities and a gradient, and does not require labeled attributes or knowledge of causal structure. Using carefully controlled test cases, we provide intuition that illuminates the function of our causal objective. We then demonstrate the practical utility of our method on image recognition tasks.
Circuit Routing Using Monte Carlo Tree Search and Deep Neural Networks
He, Youbiao, Bao, Forrest Sheng
Circuit routing is a fundamental problem in designing electronic systems such as integrated circuits (ICs) and printed circuit boards (PCBs) which form the hardware of electronics and computers. Like finding paths between pairs of locations, circuit routing generates traces of wires to connect contacts or leads of circuit components. It is challenging because finding paths between dense and massive electronic components involves a very large search space. Existing solutions are either manually designed with domain knowledge or tailored to specific design rules, hence, difficult to adapt to new problems or design needs. Therefore, a general routing approach is highly desired. In this paper, we model the circuit routing as a sequential decision-making problem, and solve it by Monte Carlo tree search (MCTS) with deep neural network (DNN) guided rollout. It could be easily extended to routing cases with more routing constraints and optimization goals. Experiments on randomly generated single-layer circuits show the potential to route complex circuits. The proposed approach can solve the problems that benchmark methods such as sequential A* method and Lee's algorithm cannot solve, and can also outperform the vanilla MCTS approach.