Deep Learning
Exploring the limits of strong membership inference attacks on large language models
State-of-the-art membership inference attacks (MIAs) typically require training many reference models, making it difficult to scale these attacks to large pre-trained language models (LLMs). As a result, prior research has either relied on weaker attacks that avoid training references (e.g., fine-tuning attacks), or on stronger attacks applied to small models and datasets. However, weaker attacks have been shown to be brittle and insights from strong attacks in simplified settings do not translate to today's LLMs. These challenges prompt an important question: are the limitations observed in prior work due to attack design choices, or are MIAs fundamentally ineffective on LLMs? We address this question by scaling LiRA--one of the strongest MIAs--to GPT-2 architectures ranging from 10M to 1B parameters, training references on over 20B tokens from the C4 dataset. Our results advance the understanding of MIAs on LLMs in four key ways. While (1) strong MIAs can succeed on pretrained LLMs, (2) their effectiveness, remains limited (e.g., AUC<0.7) in practical settings.
Predicting Functional Brain Connectivity with Context-Aware Deep Neural Networks
Spatial location and molecular interactions have long been linked to the connectivity patterns of neural circuits. Yet, at the macroscale of human brain networks, the interplay between spatial position, gene expression, and connectivity remains incompletely understood. Recent efforts to map the human transcriptome and connectome have yielded spatially resolved brain atlases, however modeling the relationship between high-dimensional transcriptomic data and connectivity while accounting for inherent spatial confounds presents a significant challenge. In this paper, we present the first deep learning approaches for predicting whole-brain functional connectivity from gene expression and regional spatial coordinates, including our proposed Spatiomolecular Transformer (SMT). SMT explicitly models biological context by tokenizing genes based on their transcription start site (TSS) order to capture multi-scale genomic organization, and incorporating regional 3D spatial location via a dedicated context [CLS] token within its multi-head self-attention mechanism. We rigorously benchmark context-aware neural networks, including SMT and a single-gene resolution Multilayer-Perceptron (MLP), to established rules-based and bilinear methods. Crucially, to ensure that learned relationships in any model are not mere artifacts of spatial proximity, we introduce novel spatiomolecular null maps preserving key transcriptomic autocorrelation structure. Context-aware neural networks outperform linear methods, significantly exceed our stringent null map estimates, and generalize across diverse connectomic datasets and parcellation resolutions. Together, these findings demonstrate a strong, predictable link between the spatial distributions of gene expression and functional brain network architecture, and establish a rigorously validated deep learning framework for decoding this relationship.
CXReasonBench: ABenchmark for Evaluating Structured Diagnostic Reasoning in Chest X-rays
Recent progress in Large Vision-Language Models (LVLMs) has enabled promising applications in medical tasks, such as report generation and visual question answering. However, existing benchmarks focus mainly on the final diagnostic answer, offering limited insight into whether models engage in clinically meaningful reasoning. To address this, we present CheXStruct and CXReasonBench, a structured pipeline and benchmark built on the publicly available MIMIC-CXR-JPG dataset. CheXStruct automatically derives a sequence of intermediate reasoning steps directly from chest X-rays, such as segmenting anatomical regions, deriving anatomical landmarks and diagnostic measurements, computing diagnostic indices, and applying clinical thresholds. CXReasonBench leverages this pipeline to evaluate whether models can perform clinically valid reasoning steps and to what extent they can learn from structured guidance, enabling fine-grained and transparent assessment of diagnostic reasoning. The benchmark comprises 18,988 QA pairs across 12 diagnostic tasks and 1,200 cases, each paired with up to 4 visual inputs, and supports multi-path, multi-stage evaluation including visual grounding via anatomical region selection and diagnostic measurements. Even the strongest of 12 evaluated LVLMs struggle with structured reasoning and generalization, often failing to link abstract knowledge with anatomically grounded visual interpretation.
TRiCo: Triadic Game-Theoretic Co-Training for Robust Semi-Supervised Learning
We introduce TRiCo, a novel triadic game-theoretic co-training framework that rethinks the structure of semi-supervised learning by incorporating a teacher, two students, and an adversarial generator into a unified training paradigm. Unlike existing co-training or teacher-student approaches, TRiCo formulates SSL as a structured interaction among three roles: (i) two student classifiers trained on frozen, complementary representations, (ii) a meta-learned teacher that adaptively regulates pseudo-label selection and loss balancing via validation-based feedback, and (iii) a non-parametric generator that perturbs embeddings to uncover decision boundary weaknesses. Pseudo-labels are selected based on mutual information rather than confidence, providing a more robust measure of epistemic uncertainty. This triadic interaction is formalized as a Stackelberg game, where the teacher leads strategy optimization and students follow under adversarial perturbations. By addressing key limitations in existing SSL frameworks--such as static view interactions, unreliable pseudo-labels, and lack of hard sample modeling--TRiCo provides a principled and generalizable solution. Extensive experiments on CIFAR10, SVHN, STL-10, and ImageNet demonstrate that TRiCo consistently achieves state-of-the-art performance in low-label regimes, while remaining architectureagnostic and compatible with frozen vision backbones.
Counterfactual reasoning: an analysis of in-context emergence
Large-scale neural language models exhibit remarkable performance in in-context learning: the ability to learn and reason about the input context on the fly. This work studies in-context counterfactual reasoning in language models, that is, the ability to predict consequences of a hypothetical scenario. We focus on a well-defined, synthetic linear regression task that requires noise abduction. Accurate prediction is based on (1) inferring an unobserved latent concept and (2) copying contextual noise from factual observations. We show that language models are capable of counterfactual reasoning. Further, we enhance existing identifiability results and reduce counterfactual reasoning for a broad class of functions to a transformation on in-context observations.
T-norm Selection for Object Detection in Autonomous Driving with Logical Constraints
Integrating logical constraints into object detection models for autonomous driving (AD) is a promising way to enhance their compliance to rules and thus increase the safety of the system. In this, t-norms have been utilized to calculate the constrained loss, i.e., the violations of logical constraints as losses. While prior works have statically selected few t-norms, we conduct an extensive experimental study to identify the most effective choices, as suboptimal t-norms can lead to undesired model behavior. For this, we present MOD-ECL, a neurosymbolic framework that implements a wide range of t-norms and can use them in an adaptive manner, with an algorithm that selects well-performing t-norms during training and a scheduler that regulates the impact of the constrained loss. We evaluate its effectiveness on the ROAD-R and ROAD-Waymo-R datasets for object detection in AD with attached common-sense constraints. Our results show that careful selection of parameters is crucial for good behavior of the constrained loss and that our framework allows us to obtain not only lower constraint violation but in some cases also an increase in detection performance. Furthermore, our methods allow fine control over the tradeoff between accuracy and violation.1
Put CASH on Bandits: AMax K-Armed Problem for Automated Machine Learning
The Combined Algorithm Selection and Hyperparameter optimization (CASH) is a challenging resource allocation problem in the field of AutoML. We propose MaxUCB, a max k-armed bandit method to trade off exploring different model classes and conducting hyperparameter optimization. MaxUCB is specifically designed for the light-tailed and bounded reward distributions arising in this setting and, thus, provides an efficient alternative compared to classic max k-armed bandit methods assuming heavy-tailed reward distributions. We theoretically and empirically evaluate our method on four standard AutoML benchmarks demonstrating superior performance over prior approaches.
Bridging Brains and Concepts: Interpretable Visual Decoding from fMRI with Semantic Bottlenecks
Decoding of visual stimuli from noninvasive neuroimaging techniques such as functional magnetic resonance (fMRI) has advanced rapidly in the last years; yet, most high-performing brain decoding models rely on complicated, non-interpretable latent spaces. In this study we present an interpretable brain decoding framework that inserts a semantic bottleneck into BrainDiffuser, a well established, simple and linear decoding pipeline. We firstly produce a 214 dimensional binary interpretable space L for images, in which each dimension answers to a specific question about the image (e.g., "Is there a person?",
Combining Discrete Adversarial Training for LLMs
Despite recent efforts in Large Language Model (LLM) safety and alignment, current adversarial attacks on frontier LLMs can still consistently force harmful generations. Although adversarial training has been widely studied and shown to significantly improve the robustness of traditional machine learning models, its strengths and weaknesses in the context of LLMs are less understood. Specifically, while existing discrete adversarial attacks are effective at producing harmful content, training LLMs with concrete adversarial prompts is often computationally expensive, leading to reliance on continuous relaxations. At the same time, despite their effectiveness and generalization capabilities, training with continuous perturbations does not always capture the full spectrum of vulnerabilities exploited by discrete attacks. In this work, we aim to bridge this gap by introducing MIXAT, a novel method that combines stronger discrete and faster continuous attacks during training. We rigorously evaluate MIXAT across a wide spectrum of state-of-theart attacks, proposing the At Least One Attack Success Rate (ALO-ASR) metric to capture the worst-case vulnerability of models. We show MIXAT achieves substantially better robustness (ALO-ASR < 20%) compared to prior defenses (ALO-ASR > 50%), while maintaining a runtime comparable to methods based on continuous relaxations. We further analyze MIXAT in realistic deployment settings, exploring how chat templates, quantization, low-rank adapters, and temperature affect both adversarial training and evaluation, revealing additional blind spots in current methodologies. Our results demonstrate that MIXAT's discrete-continuous defense offers a principled and superior robustness-accuracy tradeoff with minimal computational overhead, highlighting its promise for building safer LLMs.