Learning Graphical Models
Non-convex Statistical Optimization for Sparse Tensor Graphical Model
We consider the estimation of sparse graphical models that characterize the dependency structure of high-dimensional tensor-valued data. To facilitate the estimation of the precision matrix corresponding to each way of the tensor, we assume the data follow a tensor normal distribution whose covariance has a Kronecker product structure. The penalized maximum likelihood estimation of this model involves minimizing a non-convex objective function. In spite of the non-convexity of this estimation problem, we prove that an alternating minimization algorithm, which iteratively estimates each sparse precision matrix while fixing the others, attains an estimator with the optimal statistical rate of convergence as well as consistent graph recovery. Notably, such an estimator achieves estimation consistency with only one tensor sample, which is unobserved in previous work.
Reinforcement Learning with State Observation Costs in Action-Contingent Noiselessly Observable Markov Decision Processes
Many real-world problems that require making optimal sequences of decisions under uncertainty involve costs when the agent wishes to obtain information about its environment. We design and analyze algorithms for reinforcement learning (RL) in Action-Contingent Noiselessly Observable MDPs (ACNO-MDPs), a special class of POMDPs in which the agent can choose to either (1) fully observe the state at a cost and then act; or (2) act without any immediate observation information, relying on past observations to infer the underlying state. ACNO-MDPs arise frequently in important real-world application domains like healthcare, in which clinicians must balance the value of information gleaned from medical tests (e.g., blood-based biomarkers) with the costs of gathering that information (e.g., the costs of labor and materials required to administer such tests). We develop a PAC RL algorithm for tabular ACNO-MDPs that provides substantially tighter bounds, compared to generic POMDP-RL algorithms, on the total number of episodes exhibiting worse than near-optimal performance. For continuous-state ACNO-MDPs, we propose a novel method of incorporating observation information that, when coupled with modern RL algorithms, yields significantly faster learning compared to other POMDP-RL algorithms in several simulated environments.
The Population Posterior and Bayesian Modeling on Streams
Many modern data analysis problems involve inferences from streaming data. However, streaming data is not easily amenable to the standard probabilistic modeling approaches, which assume that we condition on finite data. We develop population variational Bayes, a new approach for using Bayesian modeling to analyze streams of data. It approximates a new type of distribution, the population posterior, which combines the notion of a population distribution of the data with Bayesian inference in a probabilistic model. We study our method with latent Dirichlet allocation and Dirichlet process mixtures on several large-scale data sets.
Efficient Bayesian Learning Curve Extrapolation using Prior-Data Fitted Networks
Learning curve extrapolation aims to predict model performance in later epochs of training, based on the performance in earlier epochs.In this work, we argue that, while the inherent uncertainty in the extrapolation of learning curves warrants a Bayesian approach, existing methods are (i) overly restrictive, and/or (ii) computationally expensive. We describe the first application of prior-data fitted neural networks (PFNs) in this context. A PFN is a transformer, pre-trained on data generated from a prior, to perform approximate Bayesian inference in a single forward pass. We propose LC-PFN, a PFN trained to extrapolate 10 million artificial right-censored learning curves generated from a parametric prior proposed in prior art using MCMC. We demonstrate that LC-PFN can approximate the posterior predictive distribution more accurately than MCMC, while being over 10 000 times faster.
Particle Gibbs for Infinite Hidden Markov Models
Infinite Hidden Markov Models (iHMM's) are an attractive, nonparametric generalization of the classical Hidden Markov Model which can automatically infer the number of hidden states in the system. However, due to the infinite-dimensional nature of the transition dynamics, performing inference in the iHMM is difficult. In this paper, we present an infinite-state Particle Gibbs (PG) algorithm to resample state trajectories for the iHMM. The proposed algorithm uses an efficient proposal optimized for iHMMs, and leverages ancestor sampling to improve the mixing of the standard PG algorithm. Our algorithm demonstrates significant convergence improvements on synthetic and real world data sets.
Bayesian Risk Markov Decision Processes
We consider finite-horizon Markov Decision Processes where parameters, such as transition probabilities, are unknown and estimated from data. The popular distributionally robust approach to addressing the parameter uncertainty can sometimes be overly conservative. In this paper, we propose a new formulation, Bayesian risk Markov decision process (BR-MDP), to address parameter uncertainty in MDPs, where a risk functional is applied in nested form to the expected total cost with respect to the Bayesian posterior distributions of the unknown parameters. The proposed formulation provides more flexible risk attitudes towards parameter uncertainty and takes into account the availability of data in future time stages. To solve the proposed formulation with the conditional value-at-risk (CVaR) risk functional, we propose an efficient approximation algorithm by deriving an analytical approximation of the value function and utilizing the convexity of CVaR.
ColdGANs: Taming Language GANs with Cautious Sampling Strategies
Training regimes based on Maximum Likelihood Estimation (MLE) suffer from known limitations, often leading to poorly generated text sequences that lack of coherence, factualness, and are prone to repetitions. At the root of these limitations is the mismatch between training and inference, i.e. the so-called exposure bias. Another problem lies in considering only the reference text as correct, while in practice several alternative formulations could be as good. Generative Adversarial Networks (GANs) could mitigate those limitations. Nonetheless, the discrete nature of text has hindered their application to language generation: the approaches proposed so far, based on Reinforcement Learning, have been shown to under-perform MLE.
Learning Generative Vision Transformer with Energy-Based Latent Space for Saliency Prediction
Vision transformer networks have shown superiority in many computer vision tasks. In this paper, we take a step further by proposing a novel generative vision transformer with latent variables following an informative energy-based prior for salient object detection. Both the vision transformer network and the energy-based prior model are jointly trained via Markov chain Monte Carlo-based maximum likelihood estimation, in which the sampling from the intractable posterior and prior distributions of the latent variables are performed by Langevin dynamics. Further, with the generative vision transformer, we can easily obtain a pixel-wise uncertainty map from an image, which indicates the model confidence in predicting saliency from the image. Different from the existing generative models which define the prior distribution of the latent variables as a simple isotropic Gaussian distribution, our model uses an energy-based informative prior which can be more expressive to capture the latent space of the data.
Modern Hopfield Networks and Attention for Immune Repertoire Classification
A central mechanism in machine learning is to identify, store, and recognize patterns. How to learn, access, and retrieve such patterns is crucial in Hopfield networks and the more recent transformer architectures. We show that the attention mechanism of transformer architectures is actually the update rule of modern Hopfield networks that can store exponentially many patterns. We exploit this high storage capacity of modern Hopfield networks to solve a challenging multiple instance learning (MIL) problem in computational biology: immune repertoire classification. In immune repertoire classification, a vast number of immune receptors are used to predict the immune status of an individual.
Can I Trust My Fairness Metric? Assessing Fairness with Unlabeled Data and Bayesian Inference
Group fairness is measured via parity of quantitative metrics across different protected demographic groups. In this paper, we investigate the problem of reliably assessing group fairness metrics when labeled examples are few but unlabeled examples are plentiful. We propose a general Bayesian framework that can augment labeled data with unlabeled data to produce more accurate and lower-variance estimates compared to methods based on labeled data alone. Our approach estimates calibrated scores (for unlabeled examples) of each group using a hierarchical latent variable model conditioned on labeled examples. This in turn allows for inference of posterior distributions for an array of group fairness metrics with a notion of uncertainty.