Graph convolution networks (GCNs) for recommendations have emerged as an important research topic due to their ability to exploit higher-order neighbors. Despite their success, most of them suffer from the popularity bias brought by a small number of active users and popular items. Also, a real-world user-item bipartite graph contains many noisy interactions, which may hamper the sensitive GCNs. Most existing works typically perform graph augmentation to create multiple views of the original graph by randomly dropping edges/nodes or relying on predefined rules, and these augmented views always serve as an auxiliary task by maximizing their correspondence. However, we argue that the graph structures generated from these vanilla approaches may be suboptimal, and maximizing their correspondence will force the representation to capture information irrelevant for the recommendation task.

Causal structure learning from time series data is a major scientific challenge. Existing algorithms assume that measurements occur sufficiently quickly; more precisely, they assume that the system and measurement timescales are approximately equal. In many scientific domains, however, measurements occur at a significantly slower rate than the underlying system changes. Moreover, the size of the mismatch between timescales is often unknown. This paper provides three distinct causal structure learning algorithms, all of which discover all dynamic graphs that could explain the observed measurement data as arising from undersampling at some rate. That is, these algorithms all learn causal structure without assuming any particular relation between the measurement and system timescales; they are thus rate-agnostic.

A growing body of work has begun to study intervention design for efficient structure learning of causal directed acyclic graphs (DAGs). A typical setting is a \emph{causally sufficient} setting, i.e. a system with no latent confounders, selection bias, or feedback, when the essential graph of the observational equivalence class (EC) is given as an input and interventions are assumed to be noiseless. Most existing works focus on \textit{worst-case} or \textit{average-case} lower bounds for the number of interventions required to orient a DAG. These worst-case lower bounds only establish that the largest clique in the essential graph \textit{could} make it difficult to learn the true DAG. In this work, we develop a \textit{universal} lower bound for single-node interventions that establishes that the largest clique is \textit{always} a fundamental impediment to structure learning.

Discovering ideal Graph Neural Networks (GNNs) architectures for different tasks is labor intensive and time consuming. To save human efforts, Neural Architecture Search (NAS) recently has been used to automatically discover adequate GNN architectures for certain tasks in order to achieve competitive or even better performance compared with manually designed architectures. However, existing works utilizing NAS to search GNN structures fail to answer the question: how NAS is able to select the desired GNN architectures? In this paper, we investigate this question to solve the problem, for the first time. We conduct a measurement study with experiments to discover that gradient based NAS methods tend to select proper architectures based on the usefulness of different types of information with respect to the target task.

We develop a latent variable model and an efficient spectral algorithm motivated by the recent emergence of very large data sets of chromatin marks from multiple human cell types. A natural model for chromatin data in one cell type is a Hidden Markov Model (HMM); we model the relationship between multiple cell types by connecting their hidden states by a fixed tree of known structure. The main challenge with learning parameters of such models is that iterative methods such as EM are very slow, while naive spectral methods result in time and space complexity exponential in the number of cell types. We exploit properties of the tree structure of the hidden states to provide spectral algorithms that are more computationally efficient for current biological datasets. We provide sample complexity bounds for our algorithm and evaluate it experimentally on biological data from nine human cell types.

We introduce the Locally Linear Latent Variable Model (LL-LVM), a probabilistic model for non-linear manifold discovery that describes a joint distribution over observations, their manifold coordinates and locally linear maps conditioned on a set of neighbourhood relationships. The model allows straightforward variational optimisation of the posterior distribution on coordinates and locally linear maps from the latent space to the observation space given the data. Thus, the LL-LVM encapsulates the local-geometry preserving intuitions that underlie non-probabilistic methods such as locally linear embedding (LLE). Its probabilistic semantics make it easy to evaluate the quality of hypothesised neighbourhood relationships, select the intrinsic dimensionality of the manifold, construct out-of-sample extensions and to combine the manifold model with additional probabilistic models that capture the structure of coordinates within the manifold.

Learning structures between groups of variables from data with missing values is an important task in the real world, yet difficult to solve. One typical scenario is discovering the structure among topics in the education domain to identify learning pathways. Here, the observations are student performances for questions under each topic which contain missing values. However, most existing methods focus on learning structures between a few individual variables from the complete data. In this work, we propose VISL, a novel scalable structure learning approach that can simultaneously infer structures between groups of variables under missing data and perform missing value imputations with deep learning. Particularly, we propose a generative model with a structured latent space and a graph neural network-based architecture, scaling to a large number of variables.

Distribution alignment has many applications in deep learning, including domain adaptation and unsupervised image-to-image translation. Most prior work on unsupervised distribution alignment relies either on minimizing simple non-parametric statistical distances such as maximum mean discrepancy or on adversarial alignment. However, the former fails to capture the structure of complex real-world distributions, while the latter is difficult to train and does not provide any universal convergence guarantees or automatic quantitative validation procedures. In this paper, we propose a new distribution alignment method based on a log-likelihood ratio statistic and normalizing flows. We show that, under certain assumptions, this combination yields a deep neural likelihood-based minimization objective that attains a known lower bound upon convergence.

Deep generative networks trained via maximum likelihood on a natural image dataset like CIFAR10 often assign high likelihoods to images from datasets with different objects (e.g., SVHN). We refine previous investigations of this failure at anomaly detection for invertible generative networks and provide a clear explanation of it as a combination of model bias and domain prior: Convolutional networks learn similar low-level feature distributions when trained on any natural image dataset and these low-level features dominate the likelihood. Hence, when the discriminative features between inliers and outliers are on a high-level, e.g., object shapes, anomaly detection becomes particularly challenging. To remove the negative impact of model bias and domain prior on detecting high-level differences, we propose two methods, first, using the log likelihood ratios of two identical models, one trained on the in-distribution data (e.g., CIFAR10) and the other one on a more general distribution of images (e.g., 80 Million Tiny Images). We also derive a novel outlier loss for the in-distribution network on samples from the more general distribution to further improve the performance.

An active learner is given a class of models, a large set of unlabeled examples, and the ability to interactively query labels of a subset of these examples; the goal of the learner is to learn a model in the class that fits the data well. Previous theoretical work has rigorously characterized label complexity of active learning, but most of this work has focused on the PAC or the agnostic PAC model. In this paper, we shift our attention to a more general setting -- maximum likelihood estimation. Provided certain conditions hold on the model class, we provide a two-stage active learning algorithm for this problem. The conditions we require are fairly general, and cover the widely popular class of Generalized Linear Models, which in turn, include models for binary and multi-class classification, regression, and conditional random fields.