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 Learning Graphical Models


Causal-Copilot: An Autonomous Causal Analysis Agent

arXiv.org Artificial Intelligence

Causal analysis plays a foundational role in scientific discovery and reliable decision-making, yet it remains largely inaccessible to domain experts due to its conceptual and algorithmic complexity. This disconnect between causal methodology and practical usability presents a dual challenge: domain experts are unable to leverage recent advances in causal learning, while causal researchers lack broad, real-world deployment to test and refine their methods. To address this, we introduce Causal-Copilot, an autonomous agent that operationalizes expert-level causal analysis within a large language model framework. Causal-Copilot automates the full pipeline of causal analysis for both tabular and time-series data -- including causal discovery, causal inference, algorithm selection, hyperparameter optimization, result interpretation, and generation of actionable insights. It supports interactive refinement through natural language, lowering the barrier for non-specialists while preserving methodological rigor. By integrating over 20 state-of-the-art causal analysis techniques, our system fosters a virtuous cycle -- expanding access to advanced causal methods for domain experts while generating rich, real-world applications that inform and advance causal theory. Empirical evaluations demonstrate that Causal-Copilot achieves superior performance compared to existing baselines, offering a reliable, scalable, and extensible solution that bridges the gap between theoretical sophistication and real-world applicability in causal analysis. A live interactive demo of Causal-Copilot is available at https://causalcopilot.com/.


Bayesian information theoretic model-averaging stochastic item selection for computer adaptive testing: compromise-free item exposure

arXiv.org Machine Learning

The goal of Computer Adaptive Testing (CAT) is to reliably estimate an individual's ability as modeled by an item response theory (IRT) instrument using only a subset of the instrument's items. A secondary goal is to vary the items presented across different testing sessions so that the sequence of items does not become overly stereotypical -- we want all items to have an exposure rate sufficiently far from zero. We formulate the optimization problem for CAT in terms of Bayesian information theory, where one chooses the item at each step based on the criterion of the ability model discrepancy -- the statistical distance between the ability estimate at the next step and the full-test ability estimate. This viewpoint of CAT naturally motivates a stochastic selection procedure that equates choosing the next item to sampling from a model-averaging ensemble ability model. Using the NIH Work Disability Functional Assessment Battery (WD-FAB), we evaluate our new methods in comparison to pre-existing methods found in the literature. We find that our stochastic selector has superior properties in terms of both item exposure and test accuracy/efficiency.


Bayesian Federated Learning for Continual Training

arXiv.org Machine Learning

Bayesian Federated Learning (BFL) enables uncertainty quantification and robust adaptation in distributed learning. In contrast to the frequentist approach, it estimates the posterior distribution of a global model, offering insights into model reliability. However, current BFL methods neglect continual learning challenges in dynamic environments where data distributions shift over time. We propose a continual BFL framework applied to human sensing with radar data collected over several days. Using Stochastic Gradient Langevin Dynamics (SGLD), our approach sequentially updates the model, leveraging past posteriors to construct the prior for the new tasks. We assess the accuracy, the expected calibration error (ECE) and the convergence speed of our approach against several baselines. Results highlight the effectiveness of continual Bayesian updates in preserving knowledge and adapting to evolving data.


Advanced posterior analyses of hidden Markov models: finite Markov chain imbedding and hybrid decoding

arXiv.org Machine Learning

Two major tasks in applications of hidden Markov models are to (i) com pute distributions of summary statistics of the hidden state sequence, and (ii) decode the hidden state sequence. We describe finite Markov chain imbedding (FMCI) and hybrid decoding to solve each of t hese two tasks. In the first part of our paper we use FMCI to compute posterior distributions o f summary statistics such as the number of visits to a hidden state, the total time spent in a hidden st ate, the dwell time in a hidden state, and the longest run length. We use simulations from the hidde n state sequence, conditional on the observed sequence, to establish the FMCI framework. In the second part of our paper we apply hybrid segmentation for improved decoding of a HMM. We demonstra te that hybrid decoding shows increased performance compared to Viterbi or Posterior decodin g (often also referred to as global or local decoding), and we introduce a novel procedure for choosing the tuning parameter in the hybrid procedure. Furthermore, we provide an alternative derivation of the hybrid loss function based on weighted geometric means. We demonstrate and apply FMCI and hyb rid decoding on various classical data sets, and supply accompanying code for reproducibility. Key words: Artemis analysis, decoding, finite Markov chain imbedding, hidden Mar kov model, hybrid decoding, pattern distributions.


Human-aligned Deep Learning: Explainability, Causality, and Biological Inspiration

arXiv.org Artificial Intelligence

This work aligns deep learning (DL) with human reasoning capabilities and needs to enable more efficient, interpretable, and robust image classification. We approach this from three perspectives: explainability, causality, and biological vision. Introduction and background open this work before diving into operative chapters. First, we assess neural networks' visualization techniques for medical images and validate an explainable-by-design method for breast mass classification. A comprehensive review at the intersection of XAI and causality follows, where we introduce a general scaffold to organize past and future research, laying the groundwork for our second perspective. In the causality direction, we propose novel modules that exploit feature co-occurrence in medical images, leading to more effective and explainable predictions. We further introduce CROCODILE, a general framework that integrates causal concepts, contrastive learning, feature disentanglement, and prior knowledge to enhance generalization. Lastly, we explore biological vision, examining how humans recognize objects, and propose CoCoReco, a connectivity-inspired network with context-aware attention mechanisms. Overall, our key findings include: (i) simple activation maximization lacks insight for medical imaging DL models; (ii) prototypical-part learning is effective and radiologically aligned; (iii) XAI and causal ML are deeply connected; (iv) weak causal signals can be leveraged without a priori information to improve performance and interpretability; (v) our framework generalizes across medical domains and out-of-distribution data; (vi) incorporating biological circuit motifs improves human-aligned recognition. This work contributes toward human-aligned DL and highlights pathways to bridge the gap between research and clinical adoption, with implications for improved trust, diagnostic accuracy, and safe deployment.


Controlled Territory and Conflict Tracking (CONTACT): (Geo-)Mapping Occupied Territory from Open Source Intelligence

arXiv.org Artificial Intelligence

Open-source intelligence provides a stream of unstructured textual data that can inform assessments of territorial control. We present CONTACT, a framework for territorial control prediction using large language models (LLMs) and minimal supervision. We evaluate two approaches: SetFit, an embedding-based few-shot classifier, and a prompt tuning method applied to BLOOMZ-560m, a multilingual generative LLM. Our model is trained on a small hand-labeled dataset of news articles covering ISIS activity in Syria and Iraq, using prompt-conditioned extraction of control-relevant signals such as military operations, casualties, and location references. We show that the BLOOMZ-based model outperforms the SetFit baseline, and that prompt-based supervision improves generalization in low-resource settings. CONTACT demonstrates that LLMs fine-tuned using few-shot methods can reduce annotation burdens and support structured inference from open-ended OSINT streams. Our code is available at https://github.com/PaulKMandal/CONTACT/.


MSTIM: A MindSpore-Based Model for Traffic Flow Prediction

arXiv.org Artificial Intelligence

Aiming at the problems of low accuracy and large error fluctuation of traditional traffic flow predictionmodels when dealing with multi-scale temporal features and dynamic change patterns. this paperproposes a multi-scale time series information modelling model MSTIM based on the Mindspore framework, which integrates long and short-term memory networks (LSTMs), convolutional neural networks (CNN), and the attention mechanism to improve the modelling accuracy and stability. The Metropolitan Interstate Traffic Volume (MITV) dataset was used for the experiments and compared and analysed with typical LSTM-attention models, CNN-attention models and LSTM-CNN models. The experimental results show that the MSTIM model achieves better results in the metrics of Mean Absolute Error (MAE), Mean Square Error (MSE), and Root Mean Square Error (RMSE), which significantly improves the accuracy and stability of the traffic volume prediction.


Bayesian continual learning and forgetting in neural networks

arXiv.org Artificial Intelligence

Biological synapses effortlessly balance memory retention and flexibility, yet artificial neural networks still struggle with the extremes of catastrophic forgetting and catastrophic remembering. Here, we introduce Metaplasticity from Synaptic Uncertainty (MESU), a Bayesian framework that updates network parameters according their uncertainty. This approach allows a principled combination of learning and forgetting that ensures that critical knowledge is preserved while unused or outdated information is gradually released. Unlike standard Bayesian approaches -- which risk becoming overly constrained, and popular continual-learning methods that rely on explicit task boundaries, MESU seamlessly adapts to streaming data. It further provides reliable epistemic uncertainty estimates, allowing out-of-distribution detection, the only computational cost being to sample the weights multiple times to provide proper output statistics. Experiments on image-classification benchmarks demonstrate that MESU mitigates catastrophic forgetting, while maintaining plasticity for new tasks. When training 200 sequential permuted MNIST tasks, MESU outperforms established continual learning techniques in terms of accuracy, capability to learn additional tasks, and out-of-distribution data detection. Additionally, due to its non-reliance on task boundaries, MESU outperforms conventional learning techniques on the incremental training of CIFAR-100 tasks consistently in a wide range of scenarios. Our results unify ideas from metaplasticity, Bayesian inference, and Hessian-based regularization, offering a biologically-inspired pathway to robust, perpetual learning.


Acoustic to Articulatory Inversion of Speech; Data Driven Approaches, Challenges, Applications, and Future Scope

arXiv.org Artificial Intelligence

This review is focused on the data-driven approaches applied in different applications of Acoustic-to-Articulatory Inversion (AAI) of speech. This review paper considered the relevant works published in the last ten years (2011-2021). The selection criteria includes (a) type of AAI - Speaker Dependent and Speaker Independent AAI, (b) objectives of the work - Articulatory approximation, Articulatory Feature space selection and Automatic Speech Recognition (ASR), explore the correlation between acoustic and articulatory features, and framework for Computer-assisted language training, (c) Corpus - Simultaneously recorded speech (wav) and medical imaging models such as ElectroMagnetic Articulography (EMA), Electropalatography (EPG), Laryngography, Electroglottography (EGG), X-ray Cineradiography, Ultrasound, and real-time Magnetic Resonance Imaging (rtMRI), (d) Methods or models - recent works are considered, and therefore all the works are based on machine learning, (e) Evaluation - as AAI is a non-linear regression problem, the performance evaluation is mostly done by Correlation Coefficient (CC), Root Mean Square Error (RMSE), and also considered Mean Square Error (MSE), and Mean Format Error (MFE). The practical application of the AAI model can provide a better and user-friendly interpretable image feedback system of articulatory positions, especially tongue movement. Such trajectory feedback system can be used to provide phonetic, language, and speech therapy for pathological subjects.


Graphical Models for Decision-Making: Integrating Causality and Game Theory

arXiv.org Artificial Intelligence

Causality and game theory are two influential fields that contribute significantly to decision-making in various domains. Causality defines and models causal relationships in complex policy problems, while game theory provides insights into strategic interactions among stakeholders with competing interests. Integrating these frameworks has led to significant theoretical advancements with the potential to improve decision-making processes. However, practical applications of these developments remain underexplored. To support efforts toward implementation, this paper clarifies key concepts in game theory and causality that are essential to their intersection, particularly within the context of probabilistic graphical models. By rigorously examining these concepts and illustrating them with intuitive, consistent examples, we clarify the required inputs for implementing these models, provide practitioners with insights into their application and selection across different scenarios, and reference existing research that supports their implementation. We hope this work encourages broader adoption of these models in real-world scenarios.