Learning Graphical Models
Bayesian Estimation of Latently-grouped Parameters in Undirected Graphical Models
In large-scale applications of undirected graphical models, such as social networks and biological networks, similar patterns occur frequently and give rise to similar parameters. In this situation, it is beneficial to group the parameters for more efficient learning. We show that even when the grouping is unknown, we can infer these parameter groups during learning via a Bayesian approach. We impose a Dirichlet process prior on the parameters. Posterior inference usually involves calculating intractable terms, and we propose two approximation algorithms, namely a Metropolis-Hastings algorithm with auxiliary variables and a Gibbs sampling algorithm with stripped Beta approximation (Gibbs SBA's performance is close to Gibbs sampling with exact likelihood calculation. Models learned with Gibbs_SBA also generalize better than the models learned by MLE on real-world Senate voting data.
Discovering Hidden Variables in Noisy-Or Networks using Quartet Tests
We give a polynomial-time algorithm for provably learning the structure and parameters of bipartite noisy-or Bayesian networks of binary variables where the top layer is completely hidden. Unsupervised learning of these models is a form of discrete factor analysis, enabling the discovery of hidden variables and their causal relationships with observed data. We obtain an efficient learning algorithm for a family of Bayesian networks that we call quartet-learnable, meaning that every latent variable has four children that do not have any other parents in common. We show that the existence of such a quartet allows us to uniquely identify each latent variable and to learn all parameters involving that latent variable. Underlying our algorithm are two new techniques for structure learning: a quartet test to determine whether a set of binary variables are singly coupled, and a conditional mutual information test that we use to learn parameters. We also show how to subtract already learned latent variables from the model to create new singly-coupled quartets, which substantially expands the class of structures that we can learn. Finally, we give a proof of the polynomial sample complexity of our learning algorithm, and experimentally compare it to variational EM.
Online Learning in Markov Decision Processes with Adversarially Chosen Transition Probability Distributions
We study the problem of online learning Markov Decision Processes (MDPs) when both the transition distributions and loss functions are chosen by an adversary. We present an algorithm that, under a mixing assumption, achieves O(\sqrt{T\log \Pi } \log \Pi) regret with respect to a comparison set of policies \Pi . The regret is independent of the size of the state and action spaces. When expectations over sample paths can be computed efficiently and the comparison set \Pi has polynomial size, this algorithm is efficient. We also consider the episodic adversarial online shortest path problem.
Bayesian Inference and Learning in Gaussian Process State-Space Models with Particle MCMC
State-space models are successfully used in many areas of science, engineering and economics to model time series and dynamical systems. We present a fully Bayesian approach to inference and learning in nonlinear nonparametric state-space models. We place a Gaussian process prior over the transition dynamics, resulting in a flexible model able to capture complex dynamical phenomena. However, to enable efficient inference, we marginalize over the dynamics of the model and instead infer directly the joint smoothing distribution through the use of specially tailored Particle Markov Chain Monte Carlo samplers. Once an approximation of the smoothing distribution is computed, the state transition predictive distribution can be formulated analytically.
Learning Gaussian Graphical Models with Observed or Latent FVSs
Gaussian Graphical Models (GGMs) or Gauss Markov random fields are widely used in many applications, and the trade-off between the modeling capacity and the efficiency of learning and inference has been an important research problem. In this paper, we study the family of GGMs with small feedback vertex sets (FVSs), where an FVS is a set of nodes whose removal breaks all the cycles. Exact inference such as computing the marginal distributions and the partition function has complexity $O(k^{2}n)$ using message-passing algorithms, where k is the size of the FVS, and n is the total number of nodes. We propose efficient structure learning algorithms for two cases: 1) All nodes are observed, which is useful in modeling social or flight networks where the FVS nodes often correspond to a small number of high-degree nodes, or hubs, while the rest of the networks is modeled by a tree. Regardless of the maximum degree, without knowing the full graph structure, we can exactly compute the maximum likelihood estimate in $O(kn^2+n^2\log n)$ if the FVS is known or in polynomial time if the FVS is unknown but has bounded size.
Learning Time-Varying Coverage Functions
Coverage functions are an important class of discrete functions that capture laws of diminishing returns. In this paper, we propose a new problem of learning time-varying coverage functions which arise naturally from applications in social network analysis, machine learning, and algorithmic game theory. We develop a novel parametrization of the time-varying coverage function by illustrating the connections with counting processes. We present an efficient algorithm to learn the parameters by maximum likelihood estimation, and provide a rigorous theoretic analysis of its sample complexity. Empirical experiments from information diffusion in social network analysis demonstrate that with few assumptions about the underlying diffusion process, our method performs significantly better than existing approaches on both synthetic and real world data.
A Filtering Approach to Stochastic Variational Inference
Stochastic variational inference (SVI) uses stochastic optimization to scale up Bayesian computation to massive data. We present an alternative perspective on SVI as approximate parallel coordinate ascent. SVI trades-off bias and variance to step close to the unknown true coordinate optimum given by batch variational Bayes (VB). We define a model to automate this process.
Signal Aggregate Constraints in Additive Factorial HMMs, with Application to Energy Disaggregation
Blind source separation problems are difficult because they are inherently unidentifiable, yet the entire goal is to identify meaningful sources. We introduce a way of incorporating domain knowledge into this problem, called signal aggregate constraints (SACs). SACs encourage the total signal for each of the unknown sources to be close to a specified value. This is based on the observation that the total signal often varies widely across the unknown sources, and we often have a good idea of what total values to expect. We incorporate SACs into an additive factorial hidden Markov model (AFHMM) to formulate the energy disaggregation problems where only one mixture signal is assumed to be observed. A convex quadratic program for approximate inference is employed for recovering those source signals. On a real-world energy disaggregation data set, we show that the use of SACs dramatically improves the original AFHMM, and significantly improves over a recent state-of-the art approach.
Spectral Learning of Mixture of Hidden Markov Models
In this paper, we propose a learning approach for the Mixture of Hidden Markov Models (MHMM) based on the Method of Moments (MoM). Computational advantages of MoM make MHMM learning amenable for large data sets. It is not possible to directly learn an MHMM with existing learning approaches, mainly due to a permutation ambiguity in the estimation process. We show that it is possible to resolve this ambiguity using the spectral properties of a global transition matrix even in the presence of estimation noise. We demonstrate the validity of our approach on synthetic and real data.
Advances in Learning Bayesian Networks of Bounded Treewidth
This work presents novel algorithms for learning Bayesian networks of bounded treewidth. Both exact and approximate methods are developed. The exact method combines mixed integer linear programming formulations for structure learning and treewidth computation. The approximate method consists in sampling k-trees (maximal graphs of treewidth k), and subsequently selecting, exactly or approximately, the best structure whose moral graph is a subgraph of that k-tree. The approaches are empirically compared to each other and to state-of-the-art methods on a collection of public data sets with up to 100 variables.