Learning Graphical Models
Probabilistic reasoning with answer sets
Baral, Chitta, Gelfond, Michael, Rushton, Nelson
This paper develops a declarative language, P-log, that combines logical and probabilistic arguments in its reasoning. Answer Set Prolog is used as the logical foundation, while causal Bayes nets serve as a probabilistic foundation. We give several non-trivial examples and illustrate the use of P-log for knowledge representation and updating of knowledge. We argue that our approach to updates is more appealing than existing approaches. We give sufficiency conditions for the coherency of P-log programs and show that Bayes nets can be easily mapped to coherent P-log programs.
Kernel Regression by Mode Calculation of the Conditional Probability Distribution
The most direct way to express arbitrary dependencies in datasets is to estimate the joint distribution and to apply afterwards the argmax-function to obtain the mode of the corresponding conditional distribution. This method is in practice difficult, because it requires a global optimization of a complicated function, the joint distribution by fixed input variables. This article proposes a method for finding global maxima if the joint distribution is modeled by a kernel density estimation. Some experiments show advantages and shortcomings of the resulting regression method in comparison to the standard Nadaraya-Watson regression technique, which approximates the optimum by the expectation value.
High-dimensional covariance estimation by minimizing $\ell_1$-penalized log-determinant divergence
Ravikumar, Pradeep, Wainwright, Martin J., Raskutti, Garvesh, Yu, Bin
Given i.i.d. observations of a random vector $X \in \mathbb{R}^p$, we study the problem of estimating both its covariance matrix $\Sigma^*$, and its inverse covariance or concentration matrix {$\Theta^* = (\Sigma^*)^{-1}$.} We estimate $\Theta^*$ by minimizing an $\ell_1$-penalized log-determinant Bregman divergence; in the multivariate Gaussian case, this approach corresponds to $\ell_1$-penalized maximum likelihood, and the structure of $\Theta^*$ is specified by the graph of an associated Gaussian Markov random field. We analyze the performance of this estimator under high-dimensional scaling, in which the number of nodes in the graph $p$, the number of edges $s$ and the maximum node degree $d$, are allowed to grow as a function of the sample size $n$. In addition to the parameters $(p,s,d)$, our analysis identifies other key quantities covariance matrix $\Sigma^*$; and (b) the $\ell_\infty$ operator norm of the sub-matrix $\Gamma^*_{S S}$, where $S$ indexes the graph edges, and $\Gamma^* = (\Theta^*)^{-1} \otimes (\Theta^*)^{-1}$; and (c) a mutual incoherence or irrepresentability measure on the matrix $\Gamma^*$ and (d) the rate of decay $1/f(n,\delta)$ on the probabilities $ \{|\hat{\Sigma}^n_{ij}- \Sigma^*_{ij}| > \delta \}$, where $\hat{\Sigma}^n$ is the sample covariance based on $n$ samples. Our first result establishes consistency of our estimate $\hat{\Theta}$ in the elementwise maximum-norm. This in turn allows us to derive convergence rates in Frobenius and spectral norms, with improvements upon existing results for graphs with maximum node degrees $d = o(\sqrt{s})$. In our second result, we show that with probability converging to one, the estimate $\hat{\Theta}$ correctly specifies the zero pattern of the concentration matrix $\Theta^*$.
Learning Partially Observable Deterministic Action Models
We present exact algorithms for identifying deterministic-actions' effects and preconditions in dynamic partially observable domains. They apply when one does not know the action model(the way actions affect the world) of a domain and must learn it from partial observations over time. Such scenarios are common in real world applications. They are challenging for AI tasks because traditional domain structures that underly tractability (e.g., conditional independence) fail there (e.g., world features become correlated). Our work departs from traditional assumptions about partial observations and action models. In particular, it focuses on problems in which actions are deterministic of simple logical structure and observation models have all features observed with some frequency. We yield tractable algorithms for the modified problem for such domains. Our algorithms take sequences of partial observations over time as input, and output deterministic action models that could have lead to those observations. The algorithms output all or one of those models (depending on our choice), and are exact in that no model is misclassified given the observations. Our algorithms take polynomial time in the number of time steps and state features for some traditional action classes examined in the AI-planning literature, e.g., STRIPS actions. In contrast, traditional approaches for HMMs and Reinforcement Learning are inexact and exponentially intractable for such domains. Our experiments verify the theoretical tractability guarantees, and show that we identify action models exactly. Several applications in planning, autonomous exploration, and adventure-game playing already use these results. They are also promising for probabilistic settings, partially observable reinforcement learning, and diagnosis.
Inference with Discriminative Posterior
Salojärvi, Jarkko, Puolamäki, Kai, Savia, Eerika, Kaski, Samuel
We study Bayesian discriminative inference given a model family $p(c,\x, \theta)$ that is assumed to contain all our prior information but still known to be incorrect. This falls in between "standard" Bayesian generative modeling and Bayesian regression, where the margin $p(\x,\theta)$ is known to be uninformative about $p(c|\x,\theta)$. We give an axiomatic proof that discriminative posterior is consistent for conditional inference; using the discriminative posterior is standard practice in classical Bayesian regression, but we show that it is theoretically justified for model families of joint densities as well. A practical benefit compared to Bayesian regression is that the standard methods of handling missing values in generative modeling can be extended into discriminative inference, which is useful if the amount of data is small. Compared to standard generative modeling, discriminative posterior results in better conditional inference if the model family is incorrect. If the model family contains also the true model, the discriminative posterior gives the same result as standard Bayesian generative modeling. Practical computation is done with Markov chain Monte Carlo.
Artificial Intelligence Techniques for Steam Generator Modelling
Wright, Sarah, Marwala, Tshilidzi
This paper investigates the use of different Artificial Intelligence methods to predict the values of several continuous variables from a Steam Generator. The objective was to determine how the different artificial intelligence methods performed in making predictions on the given dataset. The artificial intelligence methods evaluated were Neural Networks, Support Vector Machines, and Adaptive Neuro-Fuzzy Inference Systems. The types of neural networks investigated were Multi-Layer Perceptions, and Radial Basis Function. Bayesian and committee techniques were applied to these neural networks. Each of the AI methods considered was simulated in Matlab. The results of the simulations showed that all the AI methods were capable of predicting the Steam Generator data reasonably accurately. However, the Adaptive Neuro-Fuzzy Inference system out performed the other methods in terms of accuracy and ease of implementation, while still achieving a fast execution time as well as a reasonable training time.
Improved Estimation of High-dimensional Ising Models
We consider the problem of jointly estimating the parameters as well as the structure of binary valued Markov Random Fields, in contrast to earlier work that focus on one of the two problems. We formulate the problem as a maximization of $\ell_1$-regularized surrogate likelihood that allows us to find a sparse solution. Our optimization technique efficiently incorporates the cutting-plane algorithm in order to obtain a tighter outer bound on the marginal polytope, which results in improvement of both parameter estimates and approximation to marginals. On synthetic data, we compare our algorithm on the two estimation tasks to the other existing methods. We analyze the method in the high-dimensional setting, where the number of dimensions $p$ is allowed to grow with the number of observations $n$. The rate of convergence of the estimate is demonstrated to depend explicitly on the sparsity of the underlying graph.
Hierarchical structure and the prediction of missing links in networks
Clauset, Aaron, Moore, Cristopher, Newman, M. E. J.
Networks have in recent years emerged as an invaluable tool for describing and quantifying complex systems in many branches of science. Recent studies suggest that networks often exhibit hierarchical organization, where vertices divide into groups that further subdivide into groups of groups, and so forth over multiple scales. In many cases these groups are found to correspond to known functional units, such as ecological niches in food webs, modules in biochemical networks (protein interaction networks, metabolic networks, or genetic regulatory networks), or communities in social networks. Here we present a general technique for inferring hierarchical structure from network data and demonstrate that the existence of hierarchy can simultaneously explain and quantitatively reproduce many commonly observed topological properties of networks, such as right-skewed degree distributions, high clustering coefficients, and short path lengths. We further show that knowledge of hierarchical structure can be used to predict missing connections in partially known networks with high accuracy, and for more general network structures than competing techniques. Taken together, our results suggest that hierarchy is a central organizing principle of complex networks, capable of offering insight into many network phenomena.
Gibbs posterior for variable selection in high-dimensional classification and data mining
Jiang, Wenxin, Tanner, Martin A.
In the popular approach of "Bayesian variable selection" (BVS), one uses prior and posterior distributions to select a subset of candidate variables to enter the model. A completely new direction will be considered here to study BVS with a Gibbs posterior originating in statistical mechanics. The Gibbs posterior is constructed from a risk function of practical interest (such as the classification error) and aims at minimizing a risk function without modeling the data probabilistically. This can improve the performance over the usual Bayesian approach, which depends on a probability model which may be misspecified. Conditions will be provided to achieve good risk performance, even in the presence of high dimensionality, when the number of candidate variables "$K$" can be much larger than the sample size "$n$." In addition, we develop a convenient Markov chain Monte Carlo algorithm to implement BVS with the Gibbs posterior.
On the Possibility of Learning in Reactive Environments with Arbitrary Dependence
Ryabko, Daniil, Hutter, Marcus
We address the problem of reinforcement learning in which observations may exhibit an arbitrary form of stochastic dependence on past observations and actions, i.e. environments more general than (PO)MDPs. The task for an agent is to attain the best possible asymptotic reward where the true generating environment is unknown but belongs to a known countable family of environments. We find some sufficient conditions on the class of environments under which an agent exists which attains the best asymptotic reward for any environment in the class. We analyze how tight these conditions are and how they relate to different probabilistic assumptions known in reinforcement learning and related fields, such as Markov Decision Processes and mixing conditions.