We utilize the ensemble of trees framework, a tractable mixture over superexponential number of tree-structured distributions [1], to develop a new model for multivariate density estimation. The model is based on a construction of treestructured copulas - multivariate distributions with uniform on [0, 1] marginals.

We introduce a new Bayesian model for hierarchical clustering based on a prior over trees called Kingman's coalescent. We develop novel greedy and sequential Monte Carlo inferences which operate in a bottom-up agglomerative fashion. We show experimentally the superiority of our algorithms over the state-of-the-art, and demonstrate our approach in document clustering and phylolinguistics.

Although theorists have interpreted classical conditioning as a laboratory model of Bayesian belief updating, a recent reanalysis showed that the key features that theoretical models capture about learning are artifacts of averaging over subjects. Rather than learning smoothly to asymptote (reflecting, according to Bayesian models, the gradual tradeoff from prior to posterior as data accumulate), subjects learn suddenly and their predictions fluctuate perpetually. We suggest that abrupt and unstable learning can be modeled by assuming subjects are conducting inference using sequential Monte Carlo sampling with a small number of samples -- one, in our simulations. Ensemble behavior resembles exact Bayesian models since, as in particle filters, it averages over many samples. Further, the model is capable of exhibiting sophisticated behaviors like retrospective revaluation at the ensemble level, even given minimally sophisticated individuals that do not track uncertainty in their beliefs over trials.

Permutations are ubiquitous in many real world problems, such as voting, rankings and data association. Representing uncertainty over permutations is challenging, since there are n! possibilities, and typical compact representations such as graphical models cannot efficiently capture the mutual exclusivity constraints associated with permutations. In this paper, we use the "low-frequency" terms of a Fourier decomposition to represent such distributions compactly.

A wide variety of Dirichlet-multinomial'topic' models have found interesting applications in recent years. While Gibbs sampling remains an important method of inference in such models, variational techniques have certain advantages such as easy assessment of convergence, easy optimization without the need to maintain detailed balance, a bound on the marginal likelihood, and sidestepping of issues with topic-identifiability. The most accurate variational technique thus far, namely collapsed variational latent Dirichlet allocation, did not deal with model selection nor did it include inference for hyperparameters. We address both issues by generalizing the technique, obtaining the first variational algorithm to deal with the hierarchical Dirichlet process and to deal with hyperparameters of Dirichlet variables. Experiments show a significant improvement in accuracy.

We present a nonparametric Bayesian method of estimating variable order Markov processes up to a theoretically infinite order. By extending a stick-breaking prior, which is usually defined on a unit interval, "vertically" to the trees of infinite depth associated with a hierarchical Chinese restaurant process, our model directly infers the hidden orders of Markov dependencies from which each symbol originated. Experiments on character and word sequences in natural language showed that the model has a comparative performance with an exponentially large full-order model, while computationally much efficient in both time and space. We expect that this basic model will also extend to the variable order hierarchical clustering of general data.

When predicting class labels for objects within a relational database, it is often helpful to consider a model for relationships: this allows for information between class labels to be shared and to improve prediction performance. However, there are different ways by which objects can be related within a relational database. One traditional way corresponds to a Markov network structure: each existing relation is represented by an undirected edge. This encodes that, conditioned on input features, each object label is independent of other object labels given its neighbors in the graph. However, there is no reason why Markov networks should be the only representation of choice for symmetric dependence structures. Here we discuss the case when relationships are postulated to exist due to hidden common causes. We discuss how the resulting graphical model differs from Markov networks, and how it describes different types of real-world relational processes. A Bayesian nonparametric classification model is built upon this graphical representation and evaluated with several empirical studies.

The problem of obtaining the maximum a posteriori estimate of a general discrete random field (i.e. a random field defined using a finite and discrete set of labels) is known to be

Bayesian model averaging, model selection and their approximations such as BIC are generally statistically consistent, but sometimes achieve slower rates of convergence than other methods such as AIC and leave-one-out cross-validation. On the other hand, these other methods can be inconsistent. We identify the catchup phenomenon as a novel explanation for the slow convergence of Bayesian methods. Based on this analysis we define the switch-distribution, a modification of the Bayesian model averaging distribution. We prove that in many situations model selection and prediction based on the switch-distribution is both consistent and achieves optimal convergence rates, thereby resolving the AIC-BIC dilemma. The method is practical; we give an efficient algorithm.

A method is proposed for semiparametric estimation where parametric and nonparametric criteria are exploited in density estimation and unsupervised learning. This is accomplished by making sampling assumptions on a dataset that smoothly interpolate between the extreme of independently distributed (or id) sample data (as in nonparametric kernel density estimators) to the extreme of independent identically distributed (or iid) sample data. This article makes independent similarly distributed (or isd) sampling assumptions and interpolates between these two using a scalar parameter. The parameter controls a Bhattacharyya affinity penalty between pairs of distributions on samples. Surprisingly, the isd method maintains certain consistency and unimodality properties akin to maximum likelihood estimation. The proposed isd scheme is an alternative for handling nonstationarity in data without making drastic hidden variable assumptions which often make estimation difficult and laden with local optima. Experiments in density estimation on a variety of datasets confirm the value of isd over iid estimation, id estimation and mixture modeling.