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 Learning Graphical Models


Pruning for Monte Carlo Distributed Reinforcement Learning in Decentralized POMDPs

AAAI Conferences

Decentralized partially observable Markov decision processes (Dec-POMDPs) offer a powerful modeling technique for realistic multi-agent coordination problems under uncertainty. Prevalent solution techniques are centralized and assume prior knowledge of the model. Recently a Monte Carlo based distributed reinforcement learning approach was proposed, where agents take turns to learn best responses to each other’s policies. This promotes decentralization of the policy computation problem, and relaxes reliance on the full knowledge of the problem parameters. However, this Monte Carlo approach has a large sample complexity, which we address in this paper. In particular, we propose and analyze a modified version of the previous algorithm that adaptively eliminates parts of the experience tree from further exploration, thus requiring fewer samples while ensuring unchanged confidence in the learned value function. Experiments demonstrate significant reduction in sample complexity – the maximum reductions ranging from 61% to 91% over different benchmark Dec-POMDP problems – with the final policies being often better due to more focused exploration.


Controlling the Precision-Recall Tradeoff in Differential Dependency Network Analysis

arXiv.org Machine Learning

Graphical models have gained a lot of attention recently as a tool for learning and representing dependencies among variables in multivariate data. Often, domain scientists are looking specifically for differences among the dependency networks of different conditions or populations (e.g. differences between regulatory networks of different species, or differences between dependency networks of diseased versus healthy populations). The standard method for finding these differences is to learn the dependency networks for each condition independently and compare them. We show that this approach is prone to high false discovery rates (low precision) that can render the analysis useless. We then show that by imposing a bias towards learning similar dependency networks for each condition the false discovery rates can be reduced to acceptable levels, at the cost of finding a reduced number of differences. Algorithms developed in the transfer learning literature can be used to vary the strength of the imposed similarity bias and provide a natural mechanism to smoothly adjust this differential precision-recall tradeoff to cater to the requirements of the analysis conducted. We present real case studies (oncological and neurological) where domain experts use the proposed technique to extract useful differential networks that shed light on the biological processes involved in cancer and brain function.


Lifted Variable Elimination: Decoupling the Operators from the Constraint Language

Journal of Artificial Intelligence Research

Lifted probabilistic inference algorithms exploit regularities in the structure of graphical models to perform inference more efficiently. More specifically, they identify groups of interchangeable variables and perform inference once per group, as opposed to once per variable. The groups are defined by means of constraints, so the flexibility of the grouping is determined by the expressivity of the constraint language. Existing approaches for exact lifted inference use specific languages for (in)equality constraints, which often have limited expressivity. In this article, we decouple lifted inference from the constraint language. We define operators for lifted inference in terms of relational algebra operators, so that they operate on the semantic level (the constraints' extension) rather than on the syntactic level, making them language-independent. As a result, lifted inference can be performed using more powerful constraint languages, which provide more opportunities for lifting. We empirically demonstrate that this can improve inference efficiency by orders of magnitude, allowing exact inference where until now only approximate inference was feasible.


Bayesian Discovery of Multiple Bayesian Networks via Transfer Learning

arXiv.org Machine Learning

Bayesian network structure learning algorithms with limited data are being used in domains such as systems biology and neuroscience to gain insight into the underlying processes that produce observed data. Learning reliable networks from limited data is difficult, therefore transfer learning can improve the robustness of learned networks by leveraging data from related tasks. Existing transfer learning algorithms for Bayesian network structure learning give a single maximum a posteriori estimate of network models. Yet, many other models may be equally likely, and so a more informative result is provided by Bayesian structure discovery. Bayesian structure discovery algorithms estimate posterior probabilities of structural features, such as edges. We present transfer learning for Bayesian structure discovery which allows us to explore the shared and unique structural features among related tasks. Efficient computation requires that our transfer learning objective factors into local calculations, which we prove is given by a broad class of transfer biases. Theoretically, we show the efficiency of our approach. Empirically, we show that compared to single task learning, transfer learning is better able to positively identify true edges. We apply the method to whole-brain neuroimaging data.


Bridging Information Criteria and Parameter Shrinkage for Model Selection

arXiv.org Machine Learning

Model selection based on classical information criteria, such as BIC, is generally computationally demanding, but its properties are well studied. On the other hand, model selection based on parameter shrinkage by $\ell_1$-type penalties is computationally efficient. In this paper we make an attempt to combine their strengths, and propose a simple approach that penalizes the likelihood with data-dependent $\ell_1$ penalties as in adaptive Lasso and exploits a fixed penalization parameter. Even for finite samples, its model selection results approximately coincide with those based on information criteria; in particular, we show that in some special cases, this approach and the corresponding information criterion produce exactly the same model. One can also consider this approach as a way to directly determine the penalization parameter in adaptive Lasso to achieve information criteria-like model selection. As extensions, we apply this idea to complex models including Gaussian mixture model and mixture of factor analyzers, whose model selection is traditionally difficult to do; by adopting suitable penalties, we provide continuous approximators to the corresponding information criteria, which are easy to optimize and enable efficient model selection.


Thinking Fast and Slow: An Approach to Energy-Efficient Human Activity Recognition on Mobile Devices

AI Magazine

According to Daniel Kahneman, there are two systems that drive the human decision making process: The intuitive system that performs the fast thinking, and the deliberative system that does more logical and slower thinking. Inspired by this model, we propose a framework for implementing human activity recognition on mobile devices. In this area, the mobile app is usually always-on and the general challenge is how to balance accuracy and energy consumption. However, among existing approaches, those based on cellular IDs consume little power but are less accurate; those based on GPS/WiFi sampling are accurate often at the costs of battery drainage; moreover, previous methods in general do not improve over time. To address these challenges, our framework consists of two modes: In the deliberation mode, the system learns cell ID patterns that are trained by existing GPS/WiFi based methods; in the intuition mode, only the learned cell ID patterns are used for activity recognition, which is both accurate and energy-efficient; system parameters are learned to control the transition from deliberation to intuition, when sufficient confidence is gained, and the transition from intuition to deliberation, when more training is needed. For the scope of this paper, we first elaborate our framework in a subproblem in activity recognition, trip detection, which recognizes significant places and trips between them. For evaluation, we collected real-life traces of six participants over five months. Our experiments demonstrated consistent results across different participants in terms of accuracy and energy efficiency, and, more importantly, its fast improvement on energy efficiency over time due to regularities in human daily activities.


Supervised Learning and Anti-learning of Colorectal Cancer Classes and Survival Rates from Cellular Biology Parameters

arXiv.org Machine Learning

In this paper, we describe a dataset relating to cellular and physical conditions of patients who are operated upon to remove colorectal tumours. This data provides a unique insight into immunological status at the point of tumour removal, tumour classification and post-operative survival. Attempts are made to learn relationships between attributes (physical and immunological) and the resulting tumour stage and survival. Results for conventional machine learning approaches can be considered poor, especially for predicting tumour stages for the most important types of cancer. This poor performance is further investigated and compared with a synthetic, dataset based on the logical exclusive-OR function and it is shown that there is a significant level of 'anti-learning' present in all supervised methods used and this can be explained by the highly dimensional, complex and sparsely representative dataset. For predicting the stage of cancer from the immunological attributes, anti-learning approaches outperform a range of popular algorithms.


An Efficient Model Selection for Gaussian Mixture Model in a Bayesian Framework

arXiv.org Machine Learning

In order to cluster or partition data, we often use Expectation-and-Maximization (EM) or Variational approximation with a Gaussian Mixture Model (GMM), which is a parametric probability density function represented as a weighted sum of $\hat{K}$ Gaussian component densities. However, model selection to find underlying $\hat{K}$ is one of the key concerns in GMM clustering, since we can obtain the desired clusters only when $\hat{K}$ is known. In this paper, we propose a new model selection algorithm to explore $\hat{K}$ in a Bayesian framework. The proposed algorithm builds the density of the model order which any information criterions such as AIC and BIC basically fail to reconstruct. In addition, this algorithm reconstructs the density quickly as compared to the time-consuming Monte Carlo simulation.


Learning Mixed Graphical Models

arXiv.org Machine Learning

We consider the problem of learning the structure of a pairwise graphical model over continuous and discrete variables. We present a new pairwise model for graphical models with both continuous and discrete variables that is amenable to structure learning. In previous work, authors have considered structure learning of Gaussian graphical models and structure learning of discrete models. Our approach is a natural generalization of these two lines of work to the mixed case. The penalization scheme involves a novel symmetric use of the group-lasso norm and follows naturally from a particular parametrization of the model.


Algorithms of the LDA model [REPORT]

arXiv.org Machine Learning

ABSTRACT We review three algorithms for Latent Dirichlet Allocation (LDA). Two of them are variational inference algorithms: V ariational Bayesian inference and Online V ariational Bayesian inference and one is Markov Chain Monte Carlo (MCMC) algorithm - Collapsed Gibbs sampling. We compare their time complexity and performance. We find that online variational Bayesian inference is the fastest algorithm and still returns reasonably good results. 1 INTRODUCTION Nowadays big corpora are used daily. People often search through huge numbers of documents either in libraries or online, using web search engines.