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 Learning Graphical Models


Austerity in MCMC Land: Cutting the Metropolis-Hastings Budget

arXiv.org Machine Learning

Markov chain Monte Carlo (MCMC) sampling has been the main workhorse of Bayesian computation since the 1990s. A canonical MCMC algorithm proposes samples from a distribution q and then accepts or rejects these proposals with a certain probability given by the Metropolis-Hastings (MH) formula [Metropolis et al., 1953, Hastings, 1970]. For each proposed sample, the MH rule needs to examine the likelihood of all dataitems. When the number of data-cases is large this is an awful lot of computation for one bit of information, namely whether to accept or reject a proposal. In today's Big Data world, we need to rethink our Bayesian inference algorithms. Standard MCMC methods do not meet the Big Data challenge for the reason described above. Researchers have made some progress in terms of making MCMC more efficient, mostly by focusing on parallelization. Very few question the algorithm itself: is the standard MCMC paradigm really optimally efficient in achieving its goals?


Gaussian Process Volatility Model

arXiv.org Machine Learning

The accurate prediction of time-changing variances is an important task in the modeling of financial data. Standard econometric models are often limited as they assume rigid functional relationships for the variances. Moreover, function parameters are usually learned using maximum likelihood, which can lead to overfitting. To address these problems we introduce a novel model for time-changing variances using Gaussian Processes. A Gaussian Process (GP) defines a distribution over functions, which allows us to capture highly flexible functional relationships for the variances. In addition, we develop an online algorithm to perform inference. The algorithm has two main advantages. First, it takes a Bayesian approach, thereby avoiding overfitting. Second, it is much quicker than current offline inference procedures. Finally, our new model was evaluated on financial data and showed significant improvement in predictive performance over current standard models.


Grid Topology Identification using Electricity Prices

arXiv.org Machine Learning

The potential of recovering the topology of a grid using solely publicly available market data is explored here. In contemporary whole-sale electricity markets, real-time prices are typically determined by solving the network-constrained economic dispatch problem. Under a linear DC model, locational marginal prices (LMPs) correspond to the Lagrange multipliers of the linear program involved. The interesting observation here is that the matrix of spatiotemporally varying LMPs exhibits the following property: Once premultiplied by the weighted grid Laplacian, it yields a low-rank and sparse matrix. Leveraging this rich structure, a regularized maximum likelihood estimator (MLE) is developed to recover the grid Laplacian from the LMPs. The convex optimization problem formulated includes low rank- and sparsity-promoting regularizers, and it is solved using a scalable algorithm. Numerical tests on prices generated for the IEEE 14-bus benchmark provide encouraging topology recovery results.


Prediction with Missing Data via Bayesian Additive Regression Trees

arXiv.org Machine Learning

This article addresses prediction problems where covariate information is missing during model construction and is also missing in future observations for which we are obligated to generate a forecast. Our aim is to innovate a nonparametric statistical learning extension which incorporates missingness into both the training and the forecasting phases. In the spirit of nonparametric learning, we wish to incorporate the missingness in both phases automatically, without the need for pre-specified modeling. We limit our focus to tree-based statistical learning, which has demonstrated strong predictive performance and has consequently received considerable attention in recent years. State-of-the-art algorithms include Random Forests (RF, Breiman, 2001b), stochastic gradient boosting (Friedman, 2002), and Bayesian Additive and Regression Trees (BART, Chipman et al., 2010), the algorithm of interest in this study.


Planning for Decentralized Control of Multiple Robots Under Uncertainty

arXiv.org Artificial Intelligence

We describe a probabilistic framework for synthesizing control policies for general multi-robot systems, given environment and sensor models and a cost function. Decentralized, partially observable Markov decision processes (Dec-POMDPs) are a general model of decision processes where a team of agents must cooperate to optimize some objective (specified by a shared reward or cost function) in the presence of uncertainty, but where communication limitations mean that the agents cannot share their state, so execution must proceed in a decentralized fashion. While Dec-POMDPs are typically intractable to solve for real-world problems, recent research on the use of macro-actions in Dec-POMDPs has significantly increased the size of problem that can be practically solved as a Dec-POMDP. We describe this general model, and show how, in contrast to most existing methods that are specialized to a particular problem class, it can synthesize control policies that use whatever opportunities for coordination are present in the problem, while balancing off uncertainty in outcomes, sensor information, and information about other agents. We use three variations on a warehouse task to show that a single planner of this type can generate cooperative behavior using task allocation, direct communication, and signaling, as appropriate.


Bayesian Inference with Posterior Regularization and applications to Infinite Latent SVMs

arXiv.org Artificial Intelligence

Existing Bayesian models, especially nonparametric Bayesian methods, rely on specially conceived priors to incorporate domain knowledge for discovering improved latent representations. While priors can affect posterior distributions through Bayes' rule, imposing posterior regularization is arguably more direct and in some cases more natural and general. In this paper, we present regularized Bayesian inference (RegBayes), a novel computational framework that performs posterior inference with a regularization term on the desired post-data posterior distribution under an information theoretical formulation. RegBayes is more flexible than the procedure that elicits expert knowledge via priors, and it covers both directed Bayesian networks and undirected Markov networks whose Bayesian formulation results in hybrid chain graph models. When the regularization is induced from a linear operator on the posterior distributions, such as the expectation operator, we present a general convex-analysis theorem to characterize the solution of RegBayes. Furthermore, we present two concrete examples of RegBayes, infinite latent support vector machines (iLSVM) and multi-task infinite latent support vector machines (MT-iLSVM), which explore the large-margin idea in combination with a nonparametric Bayesian model for discovering predictive latent features for classification and multi-task learning, respectively. We present efficient inference methods and report empirical studies on several benchmark datasets, which appear to demonstrate the merits inherited from both large-margin learning and Bayesian nonparametrics. Such results were not available until now, and contribute to push forward the interface between these two important subfields, which have been largely treated as isolated in the community.


Better Optimism By Bayes: Adaptive Planning with Rich Models

arXiv.org Machine Learning

The computational costs of inference and planning have confined Bayesian model-based reinforcement learning to one of two dismal fates: powerful Bayes-adaptive planning but only for simplistic models, or powerful, Bayesian non-parametric models but using simple, myopic planning strategies such as Thompson sampling. We ask whether it is feasible and truly beneficial to combine rich probabilistic models with a closer approximation to fully Bayesian planning. First, we use a collection of counterexamples to show formal problems with the over-optimism inherent in Thompson sampling. Then we leverage state-of-the-art techniques in efficient Bayes-adaptive planning and non-parametric Bayesian methods to perform qualitatively better than both existing conventional algorithms and Thompson sampling on two contextual bandit-like problems.


Linear and Parallel Learning of Markov Random Fields

arXiv.org Machine Learning

We introduce a new embarrassingly parallel parameter learning algorithm for Markov random fields with untied parameters which is efficient for a large class of practical models. Our algorithm parallelizes naturally over cliques and, for graphs of bounded degree, its complexity is linear in the number of cliques. Unlike its competitors, our algorithm is fully parallel and for log-linear models it is also data efficient, requiring only the local sufficient statistics of the data to estimate parameters.


Sequential Model-Based Ensemble Optimization

arXiv.org Machine Learning

One of the most tedious tasks in the application of machine learning is model selection, i.e. hyperparameter selection. Fortunately, recent progress has been made in the automation of this process, through the use of sequential model-based optimization (SMBO) methods. This can be used to optimize a cross-validation performance of a learning algorithm over the value of its hyperparameters. However, it is well known that ensembles of learned models almost consistently outperform a single model, even if properly selected. In this paper, we thus propose an extension of SMBO methods that automatically constructs such ensembles. This method builds on a recently proposed ensemble construction paradigm known as agnostic Bayesian learning. In experiments on 22 regression and 39 classification data sets, we confirm the success of this proposed approach, which is able to outperform model selection with SMBO.


Discovering Latent Network Structure in Point Process Data

arXiv.org Machine Learning

Networks play a central role in modern data analysis, enabling us to reason about systems by studying the relationships between their parts. Most often in network analysis, the edges are given. However, in many systems it is difficult or impossible to measure the network directly. Examples of latent networks include economic interactions linking financial instruments and patterns of reciprocity in gang violence. In these cases, we are limited to noisy observations of events associated with each node. To enable analysis of these implicit networks, we develop a probabilistic model that combines mutually-exciting point processes with random graph models. We show how the Poisson superposition principle enables an elegant auxiliary variable formulation and a fully-Bayesian, parallel inference algorithm. We evaluate this new model empirically on several datasets.