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 Learning Graphical Models


Value Iteration with Options and State Aggregation

arXiv.org Machine Learning

This paper presents a way of solving Markov Decision Processes that combines state abstraction and temporal abstraction. Specifically, we combine state aggregation with the options framework and demonstrate that they work well together and indeed it is only after one combines the two that the full benefit of each is realized. We introduce a hierarchical value iteration algorithm where we first coarsely solve subgoals and then use these approximate solutions to exactly solve the MDP. This algorithm solved several problems faster than vanilla value iteration.


Prediction and Modularity in Dynamical Systems

arXiv.org Artificial Intelligence

Identifying and understanding modular organizations is centrally important in the study of complex systems. Several approaches to this problem have been advanced, many framed in information-theoretic terms. Our treatment starts from the complementary point of view of statistical modeling and prediction of dynamical systems. It is known that for finite amounts of training data, simpler models can have greater predictive power than more complex ones. We use the trade-off between model simplicity and predictive accuracy to generate optimal multiscale decompositions of dynamical networks into weakly-coupled, simple modules. State-dependent and causal versions of our method are also proposed.


Submodular relaxation for inference in Markov random fields

arXiv.org Machine Learning

In this paper we address the problem of finding the most probable state of a discrete Markov random field (MRF), also known as the MRF energy minimization problem. The task is known to be NP-hard in general and its practical importance motivates numerous approximate algorithms. We propose a submodular relaxation approach (SMR) based on a Lagrangian relaxation of the initial problem. Unlike the dual decomposition approach of Komodakis et al., 2011 SMR does not decompose the graph structure of the initial problem but constructs a submodular energy that is minimized within the Lagrangian relaxation. Our approach is applicable to both pairwise and high-order MRFs and allows to take into account global potentials of certain types. We study theoretical properties of the proposed approach and evaluate it experimentally.


Dirichlet Process Parsimonious Mixtures for clustering

arXiv.org Machine Learning

The parsimonious Gaussian mixture models, which exploit an eigenvalue decomposition of the group covariance matrices of the Gaussian mixture, have shown their success in particular in cluster analysis. Their estimation is in general performed by maximum likelihood estimation and has also been considered from a parametric Bayesian prospective. We propose new Dirichlet Process Parsimonious mixtures (DPPM) which represent a Bayesian nonparametric formulation of these parsimonious Gaussian mixture models. The proposed DPPM models are Bayesian nonparametric parsimonious mixture models that allow to simultaneously infer the model parameters, the optimal number of mixture components and the optimal parsimonious mixture structure from the data. We develop a Gibbs sampling technique for maximum a posteriori (MAP) estimation of the developed DPMM models and provide a Bayesian model selection framework by using Bayes factors. We apply them to cluster simulated data and real data sets, and compare them to the standard parsimonious mixture models. The obtained results highlight the effectiveness of the proposed nonparametric parsimonious mixture models as a good nonparametric alternative for the parametric parsimonious models.


SPRITE: A Response Model For Multiple Choice Testing

arXiv.org Machine Learning

Item response theory (IRT) models for categorical response data are widely used in the analysis of educational data, computerized adaptive testing, and psychological surveys. However, most IRT models rely on both the assumption that categories are strictly ordered and the assumption that this ordering is known a priori. These assumptions are impractical in many real-world scenarios, such as multiple-choice exams where the levels of incorrectness for the distractor categories are often unknown. While a number of results exist on IRT models for unordered categorical data, they tend to have restrictive modeling assumptions that lead to poor data fitting performance in practice. Furthermore, existing unordered categorical models have parameters that are difficult to interpret. In this work, we propose a novel methodology for unordered categorical IRT that we call SPRITE (short for stochastic polytomous response item model) that: (i) analyzes both ordered and unordered categories, (ii) offers interpretable outputs, and (iii) provides improved data fitting compared to existing models. We compare SPRITE to existing item response models and demonstrate its efficacy on both synthetic and real-world educational datasets.


Combined modeling of sparse and dense noise for improvement of Relevance Vector Machine

arXiv.org Machine Learning

Using a Bayesian approach, we consider the problem of recovering sparse signals under additive sparse and dense noise. Typically, sparse noise models outliers, impulse bursts or data loss. To handle sparse noise, existing methods simultaneously estimate the sparse signal of interest and the sparse noise of no interest. For estimating the sparse signal, without the need of estimating the sparse noise, we construct a robust Relevance Vector Machine (RVM). In the RVM, sparse noise and ever present dense noise are treated through a combined noise model. The precision of combined noise is modeled by a diagonal matrix. We show that the new RVM update equations correspond to a non-symmetric sparsity inducing cost function. Further, the combined modeling is found to be computationally more efficient. We also extend the method to block-sparse signals and noise with known and unknown block structures. Through simulations, we show the performance and computation efficiency of the new RVM in several applications: recovery of sparse and block sparse signals, housing price prediction and image denoising.


Identifiability and optimal rates of convergence for parameters of multiple types in finite mixtures

arXiv.org Machine Learning

This paper studies identifiability and convergence behaviors for parameters of multiple types in finite mixtures, and the effects of model fitting with extra mixing components. First, we present a general theory for strong identifiability, which extends from the previous work of Nguyen [2013] and Chen [1995] to address a broad range of mixture models and to handle matrix-variate parameters. These models are shown to share the same Wasserstein distance based optimal rates of convergence for the space of mixing distributions --- $n^{-1/2}$ under $W_1$ for the exact-fitted and $n^{-1/4}$ under $W_2$ for the over-fitted setting, where $n$ is the sample size. This theory, however, is not applicable to several important model classes, including location-scale multivariate Gaussian mixtures, shape-scale Gamma mixtures and location-scale-shape skew-normal mixtures. The second part of this work is devoted to demonstrating that for these "weakly identifiable" classes, algebraic structures of the density family play a fundamental role in determining convergence rates of the model parameters, which display a very rich spectrum of behaviors. For instance, the optimal rate of parameter estimation in an over-fitted location-covariance Gaussian mixture is precisely determined by the order of a solvable system of polynomial equations --- these rates deteriorate rapidly as more extra components are added to the model. The established rates for a variety of settings are illustrated by a simulation study.


Fast and optimal nonparametric sequential design for astronomical observations

arXiv.org Machine Learning

The spectral energy distribution (SED) is a relatively easy way for astronomers to distinguish between different astronomical objects such as galaxies, black holes, and stellar objects. By comparing the observations from a source at different frequencies with template models, astronomers are able to infer the type of this observed object. In this paper, we take a Bayesian model averaging perspective to learn astronomical objects, employing a Bayesian nonparametric approach to accommodate the deviation from convex combinations of known log-SEDs. To effectively use telescope time for observations, we then study Bayesian nonparametric sequential experimental design without conjugacy, in which we use sequential Monte Carlo as an efficient tool to maximize the volume of information stored in the posterior distribution of the parameters of interest. A new technique for performing inferences in log-Gaussian Cox processes called the Poisson log-normal approximation is also proposed. Simulations show the speed, accuracy, and usefulness of our method. While the strategy we propose in this paper is brand new in the astronomy literature, the inferential techniques developed apply to more general nonparametric sequential experimental design problems.


Coherent Predictive Inference under Exchangeability with Imprecise Probabilities

Journal of Artificial Intelligence Research

Coherent reasoning under uncertainty can be represented in a very general manner by coherent sets of desirable gambles. In a context that does not allow for indecision, this leads to an approach that is mathematically equivalent to working with coherent conditional probabilities. If we do allow for indecision, this leads to a more general foundation for coherent (imprecise-)probabilistic inference. In this framework, and for a given finite category set, coherent predictive inference under exchangeability can be represented using Bernstein coherent cones of multivariate polynomials on the simplex generated by this category set. This is a powerful generalisation of de Finetti's Representation Theorem allowing for both imprecision and indecision. We define an inference system as a map that associates a Bernstein coherent cone of polynomials with every finite category set. Many inference principles encountered in the literature can then be interpreted, and represented mathematically, as restrictions on such maps. We discuss, as particular examples, two important inference principles: representation insensitivitya strengthened version of Walley's representation invarianceand specificity. We show that there is an infinity of inference systems that satisfy these two principles, amongst which we discuss in particular the skeptically cautious inference system, the inference systems corresponding to (a modified version of) Walley and Bernard's Imprecise Dirichlet Multinomial Models (IDMM), the skeptical IDMM inference systems, and the Haldane inference system. We also prove that the latter produces the same posterior inferences as would be obtained using Haldane's improper prior, implying that there is an infinity of proper priors that produce the same coherent posterior inferences as Haldane's improper one. Finally, we impose an additional inference principle that allows us to characterise uniquely the immediate predictions for the IDMM inference systems.


Survey schemes for stochastic gradient descent with applications to M-estimation

arXiv.org Machine Learning

In certain situations that shall be undoubtedly more and more common in the Big Data era, the datasets available are so massive that computing statistics over the full sample is hardly feasible, if not unfeasible. A natural approach in this context consists in using survey schemes and substituting the "full data" statistics with their counterparts based on the resulting random samples, of manageable size. It is the main purpose of this paper to investigate the impact of survey sampling with unequal inclusion probabilities on stochastic gradient descent-based M-estimation methods in large-scale statistical and machine-learning problems. Precisely, we prove that, in presence of some a priori information, one may significantly increase asymptotic accuracy when choosing appropriate first order inclusion probabilities, without affecting complexity. These striking results are described here by limit theorems and are also illustrated by numerical experiments.