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 Learning Graphical Models


Clamping Variables and Approximate Inference

Neural Information Processing Systems

It was recently proved using graph covers (Ruozzi, 2012) that the Bethe partition function is upper bounded by the true partition function for a binary pairwise model that is attractive. Here we provide a new, arguably simpler proof from first principles. We make use of the idea of clamping a variable to a particular value. For an attractive model, we show that summing over the Bethe partition functions for each sub-model obtained after clamping any variable can only raise (and hence improve) the approximation. In fact, we derive a stronger result that may have other useful implications. Repeatedly clamping until we obtain a model with no cycles, where the Bethe approximation is exact, yields the result. We also provide a related lower bound on a broad class of approximate partition functions of general pairwise multi-label models that depends only on the topology. We demonstrate that clamping a few wisely chosen variables can be of practical value by dramatically reducing approximation error.


Variational Gaussian Process State-Space Models

Neural Information Processing Systems

State-space models have been successfully used for more than fifty years in different areas of science and engineering. We present a procedure for efficient variational Bayesian learning of nonlinear state-space models based on sparse Gaussian processes. The result of learning is a tractable posterior over nonlinear dynamical systems. In comparison to conventional parametric models, we offer the possibility to straightforwardly trade off model capacity and computational cost whilst avoiding overfitting. Our main algorithm uses a hybrid inference approach combining variational Bayes and sequential Monte Carlo. We also present stochastic variational inference and online learning approaches for fast learning with long time series.


Stochastic variational inference for hidden Markov models

Neural Information Processing Systems

Variational inference algorithms have proven successful for Bayesian analysis in large data settings, with recent advances using stochastic variational inference (SVI). However, such methods have largely been studied in independent or exchangeable data settings. We develop an SVI algorithm to learn the parameters of hidden Markov models (HMMs) in a time-dependent data setting. The challenge in applying stochastic optimization in this setting arises from dependencies in the chain, which must be broken to consider minibatches of observations. We propose an algorithm that harnesses the memory decay of the chain to adaptively bound errors arising from edge effects. We demonstrate the effectiveness of our algorithm on synthetic experiments and a large genomics dataset where a batch algorithm is computationally infeasible.


Consistency of weighted majority votes

Neural Information Processing Systems

We revisit from a statistical learning perspective the classical decision-theoretic problem of weighted expert voting. In particular, we examine the consistency (both asymptotic and finitary) of the optimal Nitzan-Paroush weighted majority and related rules. In the case of known expert competence levels, we give sharp error estimates for the optimal rule. When the competence levels are unknown, they must be empirically estimated. We provide frequentist and Bayesian analyses for this situation. Some of our proof techniques are non-standard and may be of independent interest. The bounds we derive are nearly optimal, and several challenging open problems are posed. Experimental results are provided to illustrate the theory.


Asynchronous Anytime Sequential Monte Carlo

Neural Information Processing Systems

We introduce a new sequential Monte Carlo algorithm we call the particle cascade. The particle cascade is an asynchronous, anytime alternative to traditional sequential Monte Carlo algorithms that is amenable to parallel and distributed implementations. It uses no barrier synchronizations which leads to improved particle throughput and memory efficiency. It is an anytime algorithm in the sense that it can be run forever to emit an unbounded number of particles while keeping within a fixed memory budget. We prove that the particle cascade provides an unbiased marginal likelihood estimator which can be straightforwardly plugged into existing pseudo-marginal methods.


Deep Learning for Real-Time Atari Game Play Using Offline Monte-Carlo Tree Search Planning

Neural Information Processing Systems

The combination of modern Reinforcement Learning and Deep Learning approaches holds the promise of making significant progress on challenging applications requiring both rich perception and policy-selection. The Arcade Learning Environment (ALE) provides a set of Atari games that represent a useful benchmark set of such applications. A recent breakthrough in combining model-free reinforcement learning with deep learning, called DQN, achieves the best real-time agents thus far. Planning-based approaches achieve far higher scores than the best model-free approaches, but they exploit information that is not available to human players, and they are orders of magnitude slower than needed for real-time play. Our main goal in this work is to build a better real-time Atari game playing agent than DQN. The central idea is to use the slow planning-based agents to provide training data for a deep-learning architecture capable of real-time play. We proposed new agents based on this idea and show that they outperform DQN.


Conditional Random Field Autoencoders for Unsupervised Structured Prediction

Neural Information Processing Systems

We introduce a framework for unsupervised learning of structured predictors with overlapping, global features. Each input's latent representation is predicted conditional on the observed data using a feature-rich conditional random field (CRF). Then a reconstruction of the input is (re)generated, conditional on the latent structure, using a generative model which factorizes similarly to the CRF. The autoencoder formulation enables efficient exact inference without resorting to unrealistic independence assumptions or restricting the kinds of features that can be used. We illustrate insightful connections to traditional autoencoders, posterior regularization and multi-view learning. Finally, we show competitive results with instantiations of the framework for two canonical tasks in natural language processing: part-of-speech induction and bitext word alignment, and show that training our model can be substantially more efficient than comparable feature-rich baselines.


An Integer Polynomial Programming Based Framework for Lifted MAP Inference

Neural Information Processing Systems

In this paper, we present a new approach for lifted MAP inference in Markov logic networks (MLNs). The key idea in our approach is to compactly encode the MAP inference problem as an Integer Polynomial Program (IPP) by schematically applying three lifted inference steps to the MLN: lifted decomposition, lifted conditioning, and partial grounding. Our IPP encoding is lifted in the sense that an integer assignment to a variable in the IPP may represent a truth-assignment to multiple indistinguishable ground atoms in the MLN. We show how to solve the IPP by first converting it to an Integer Linear Program (ILP) and then solving the latter using state-of-the-art ILP techniques. Experiments on several benchmark MLNs show that our new algorithm is substantially superior to ground inference and existing methods in terms of computational efficiency and solution quality.


Distributed Variational Inference in Sparse Gaussian Process Regression and Latent Variable Models

Neural Information Processing Systems

Carl E. Rasmussen Gaussian processes (GPs) are a powerful tool for probabilistic inference over functions. Theyhave been applied to both regression and nonlinear dimensionality reduction, and offer desirable properties such as uncertainty estimates, robustness to over-fitting, and principled ways for tuning hyper-parameters. However the scalability of these models to big datasets remains an active topic of research. We introduce a novel re-parametrisation of variational inference for sparse GP regression and latent variable models that allows for an efficient distributed algorithm. Thisis done by exploiting the decoupling of the data given the inducing points to reformulate the evidence lower bound in a Map-Reduce setting. We show that the inference scales well with data and computational resources, while preserving a balanced distribution of the load among the nodes. We further demonstrate the utility in scaling Gaussian processes to big data. We show that GP performance improves with increasing amounts of data in regression (on flight data with 2 million records) and latent variable modelling (on MNIST). The results show that GPs perform better than many common models often used for big data.


Compressive Sensing of Signals from a GMM with Sparse Precision Matrices

Neural Information Processing Systems

This paper is concerned with compressive sensing of signals drawn from a Gaussian mixture model (GMM) with sparse precision matrices. Previous work has shown: (i) a signal drawn from a given GMM can be perfectly reconstructed from r noise-free measurements if the (dominant) rank of each covariance matrix is less than r; (ii) a sparse Gaussian graphical model can be efficiently estimated from fully-observed training signals using graphical lasso. This paper addresses a problem more challenging than both (i) and (ii), by assuming that the GMM is unknown and each signal is only partially observed through incomplete linear measurements. Under these challenging assumptions, we develop a hierarchical Bayesian method to simultaneously estimate the GMM and recover the signals using solely the incomplete measurements and a Bayesian shrinkage prior that promotes sparsity of the Gaussian precision matrices. In addition, we provide theoretical performance bounds to relate the reconstruction error to the number of signals for which measurements are available, the sparsity level of precision matrices, and the “incompleteness” of measurements. The proposed method is demonstrated extensively on compressive sensing of imagery and video, and the results with simulated and hardware-acquired real measurements show significant performance improvement over state-of-the-art methods.